LOCUS       XM_006522443            2247 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus peptidylprolyl isomerase (cyclophilin)-like
            2 (Ppil2), transcript variant X1, mRNA.
ACCESSION   XM_006522443
VERSION     XM_006522443.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006522443.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..2247
                     /gene="Ppil2"
                     /gene_synonym="0610009L05Rik; 1700016N17Rik;
                     4921520K19Rik; 4930511F14Rik; C130078A06Rik; CYC4"
                     /note="peptidylprolyl isomerase (cyclophilin)-like 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 119 ESTs, 1077 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 46 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:66053"
                     /db_xref="MGI:MGI:2447857"
     CDS             88..1563
                     /gene="Ppil2"
                     /gene_synonym="0610009L05Rik; 1700016N17Rik;
                     4921520K19Rik; 4930511F14Rik; C130078A06Rik; CYC4"
                     /codon_start=1
                     /product="RING-type E3 ubiquitin-protein ligase PPIL2
                     isoform X1"
                     /protein_id="XP_006522506.1"
                     /db_xref="GeneID:66053"
                     /db_xref="MGI:MGI:2447857"
                     /translation="MGKRQHQKDKMYITCAEYTHFYGGRKPDISQTSFRRLPFDHCSL
                     SLQPFVYPVCTPEGVVFDLLNIVPWLKKYGTNPSTGEKLDGKSLIKLNFAKNSEGQYH
                     CPVLYSVFTDNTHIVAIRTTGNVYTYEAVEQLNIKAKNLRDLLTDEPFSRQDIITLQD
                     PTNLDKFNVSNFFHVKNNMRIIDPDEEKAKQDPSYYLKNTNSETRETLQELYKEFKGD
                     EILAATMRPPEKKKVDQLNAAHYSTGKVSASFTSTAMVPETTHEAAVIDEDVLRYQFV
                     KKKGYVRLHTNKGDLNLELHCDLIQGGDPTGTGTGGESFWGKPFKDEFRPNLSHTGRG
                     VLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTDRP
                     KEEVLICTTTVFVDPYEEADAQIAQERKKTQHQVDPEAKVKMSQPQPGNQGPQTYRQG
                     VGKYIHPAATKRSAEEEPSTSTATPTAKKRPSRGFGDFSSW"
ORIGIN      
        1 atccagtgcg tcgatctccg gaagtagttg agaaagcgga ggcgccatag tcagtgtctg
       61 ctgtggtctc ttcggtttgt tgccaccatg gggaagcgac agcaccagaa ggacaagatg
      121 tatatcactt gtgctgagta cactcatttc tatggtggca ggaagccaga tatctcacag
      181 acaagttttc gccgcttacc ttttgaccac tgcagtctct ctctccagcc ttttgtctac
      241 ccagtctgca ccccagaagg tgtcgtcttt gacttgctga acattgttcc ctggcttaag
      301 aagtatggga cgaatcccag cactggagag aaacttgatg ggaagtcctt gatcaagctg
      361 aacttcgcaa agaacagcga agggcagtac cactgtccag tgctgtattc cgtgttcact
      421 gacaacaccc atattgtggc catcaggaca actggcaatg tctacaccta tgaggcagtg
      481 gagcagctaa acatcaaggc caagaacttg cgggatctgt tgactgatga gcccttttcc
      541 aggcaagaca tcatcaccct gcaggacccc accaatttgg acaaattcaa tgttagcaac
      601 ttcttccatg tgaagaataa catgagaata atagacccag atgaggaaaa ggccaaacaa
      661 gacccatctt attatttgaa aaacacaaat tcggagacga gagagacgct acaggagctc
      721 tacaaagagt tcaaaggaga tgagatttta gcagctacca tgaggccacc tgagaagaag
      781 aaggtggacc aactgaatgc ggcccactac tccacaggga aggtcagtgc atccttcacc
      841 tctactgcca tggtgcccga gaccacgcat gaagcagctg tcattgatga agatgtactg
      901 cgctaccagt ttgtgaagaa aaagggctat gtaaggcttc acaccaacaa gggcgacctt
      961 aacttagagc tgcactgtga cctgatccag ggcggtgacc ccacaggtac aggcacaggt
     1021 ggagagtcat tctggggcaa gcctttcaaa gatgagttcc gtcccaacct ttcacacacg
     1081 ggccgtgggg tgctcagcat ggccaattcg gggcccaaca ccaacaaatc tcagttcttc
     1141 atcacattcc gatcctgcgc ttacctggat aagaagcata ccatctttgg acgggttgtt
     1201 gggggctttg acacgctgac agccatggag aatgtggaga gtgaccctaa aactgaccgt
     1261 cctaaggagg aagtgctcat atgtacaacc acagtgtttg tggaccccta tgaggaggct
     1321 gatgcccaga ttgcccagga acggaagaag acacagcatc aggtggatcc agaggccaag
     1381 gtcaagatga gtcagcccca gcctggaaac cagggacccc agacataccg ccagggggtg
     1441 ggcaagtaca tccaccctgc ggccacgaaa cgatcagcag aggaagaacc atcgaccagc
     1501 actgccaccc ccacggccaa gaaaaggccc agtcggggct ttggggactt cagctcctgg
     1561 tagcagcagg ctggcctcag ggatcctggc cactcacaag ctactacaag gtggtgtcag
     1621 aagcatcagg accccagaag ccctcggttc tcagcgggct ctgagaccct gatcctttgc
     1681 tcctagtgga tgctgcagga acgaacgtgg ctcgccgccg cccccacctc cacccccacc
     1741 ctgggaacct tgctgtgtga cgacaggagc tttattttat acctcccaca gacacgccac
     1801 agagggctga cagctttggc taggagacag ggaggccaag gcgctctgtt tgctcgagct
     1861 tgctggtcct gctgttcttg gtgaactccc tgtgggttcc acagcactgc agtcagcctt
     1921 gctcagcagc cgacacctgt ccccagggca ggcagctgtg tcctctcctg tcctccagca
     1981 cagaggacag accaccaggg cttgcatttc catgggtcgg ttgtctatag cttaaatggt
     2041 agtgttttag acagtaaaga cacttggatt ttgaaaactg cctgatgagc tcatcagaaa
     2101 ataaaggact tttgagggga aaaaaaatct catttctgat ctcttcaaat acctgacaga
     2161 tgccatcaag aataagcatt aaggtataaa aatactatgt atacagtaac aagacaacaa
     2221 ggaaataaac cacatttcta aagcaaa
//
