LOCUS       XM_006522439            2115 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus popeye domain containing 2 (Popdc2),
            transcript variant X2, mRNA.
ACCESSION   XM_006522439
VERSION     XM_006522439.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006522439.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..2115
                     /gene="Popdc2"
                     /gene_synonym="Pop2"
                     /note="popeye domain containing 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 44
                     ESTs, 6 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 15 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:64082"
                     /db_xref="MGI:MGI:1930150"
     CDS             497..1639
                     /gene="Popdc2"
                     /gene_synonym="Pop2"
                     /codon_start=1
                     /product="popeye domain-containing protein 2 isoform X2"
                     /protein_id="XP_006522502.1"
                     /db_xref="GeneID:64082"
                     /db_xref="MGI:MGI:1930150"
                     /translation="MSANGSSVAQLLWQPPVCRSWKPDVEGAVYHLANCFLLMGFMAG
                     SGVYGCFYLFGILGPGYLCCVLWGWFDACGLDIVLWNVLLTVACLLQLAQLVYRVRVN
                     TLPEEFNLLYRTLCLPLQVPLQVYKEIVHCCHEQVLTLATEQTYAVEGETPINRLSLL
                     LSGRVRVSQDGQFLHYIFPYQFMDSPEWESLHPSEEGTFQVIRSPEAAQSPATVTLTA
                     ETECSYISWPRKNLYLLLNRERYISRLFSALLGYDISEKLYTLNDKLFAKFGLRFDIR
                     LPSLYHVLSPSASDGEPESEKDDEEALEAAVSPAQARPICIVPTPPCSAPPATTNFPV
                     PLPRARMPRMPRPDSGNLASRRPLQNSSQVMSRSQAPLAPIHTPEL"
ORIGIN      
        1 aagagatcat gcattccaaa tggaacacaa gtgtgcttcc cctgctggct ctccactccg
       61 cgttctgcct gggaacgaca gagagcagaa tgtggctgct tcgtcccgtg ttgctgaagt
      121 tcatggtgtc gagttcctac ttcctctcag gacaatgtat gctgtttgct aaggactaaa
      181 tatgaagacc agcctaagaa agccggagcc aaagaggttt accagagcac tgcgggaggg
      241 acaagagctt cgctgagaga gagagaaaga gaggaacgag gaaaagaaaa atcccaaaca
      301 acaaacttag gctttcaagc ttccatgaag tgtactatgc tcctgcgttc tttctcagag
      361 ccaccggaag cattcctgcc agcaaggttg cattggtagt gagaagccac ctgggaggac
      421 aaactgactg attttcccct cagtttcctt tgtggagacc gttttggagc ctgcaaaggc
      481 ctcgagggcc ccaaagatga gtgccaatgg cagctcggtg gctcagctcc tctggcagcc
      541 gcccgtgtgc aggagctgga aaccggatgt agaaggagct gtctatcacc tggccaactg
      601 tttcttgctt atgggcttta tggcaggcag tggagtgtat ggatgcttct atcttttcgg
      661 catcctgggc ccaggctacc tctgctgcgt gctgtggggc tggtttgatg cttgtggact
      721 agacatcgtc ctttggaacg tcctcctgac agtggcttgc ctgcttcagc tggcacagct
      781 ggtctatcgt gtccgggtga ataccctccc ggaggaattc aatctcctct acaggacact
      841 gtgcctgccc ctgcaggtgc ccctgcaggt ctacaaggag attgtccact gctgccatga
      901 gcaggtcttg acgctggcca cagagcagac ctacgctgtg gagggggaga cccccatcaa
      961 tcgcctgtcc ctgctcctct caggccgggt tcgagtgagc caagacgggc agtttctgca
     1021 ctacatcttt ccgtatcagt tcatggactc tcctgaatgg gaatcactgc atccttctga
     1081 agaggggacc ttccaggtaa taaggagccc cgaggcagca cagtcacctg ccactgtgac
     1141 gctgactgcg gagaccgaat gtagctacat ttcctggccc cggaaaaatc tttaccttct
     1201 tctgaacaga gagcgataca tctcccgcct cttctcagcc ctgctgggct atgacatctc
     1261 ggagaagctc tataccctca atgacaagct gtttgccaag tttgggttac gcttcgacat
     1321 ccgccttccc agcctctacc acgttctgag tccctctgcc tcagacgggg aaccagagtc
     1381 tgagaaagat gatgaagaag cccttgaggc agctgtgtcc cctgctcagg ccaggcccat
     1441 ctgcatcgtg ccaacacccc cttgttccgc gcctccagca accaccaact ttcccgtgcc
     1501 tctgccccgg gccaggatgc ccaggatgcc caggccggac agcggcaacc tggcctctag
     1561 acgtcctctc cagaactctt ctcaagttat gtccagatcc caggcccctc tggctccaat
     1621 tcacactcct gagctctaag gatcacagag ctgtcgtctc tgtagccaga tggcactcct
     1681 ccatgttccc cggatggcca cttatactct cacccctcct cttagccctc cagaaagatg
     1741 tgtggcaagc tgggggatgg acatgacgtg aagaaactca ccttcaggag ccttccttac
     1801 agcaggaggg tccagaggca cctggcctga ctccatcctt tatgggttgc aggacattgc
     1861 caggtttaca cggcctctga gcctggactg tgaggctagg aactcacgtc acagggttgt
     1921 tgtgaggatc cagtgagctg attgggtaga gcacctatga caggacatgg cgtcctgcaa
     1981 gcatgcaata aaacgcttca cgcctctccc cgtgttgttg ctttaaattg tctgaaagaa
     2041 tccaatgact tttacccatg cttattttac tcccaaaatt aattttcaat tgaaataaaa
     2101 aattttaaat cccaa
//
