LOCUS       NM_001162928            4727 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus POM121 transmembrane nucleoporin like 2 (Pom121l2),
            transcript variant 1, mRNA.
ACCESSION   NM_001162928 XR_035273 XR_035300
VERSION     NM_001162928.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4727)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL589879.21, AL606968.9 and AL590614.8.
            
            On or before Jul 2, 2009 this sequence version replaced
            XR_035273.1, XR_035300.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1470              AL589879.21        181348-182817
            1471-3464           AL606968.9         2001-3994
            3465-4727           AL590614.8         2001-3263
FEATURES             Location/Qualifiers
     source          1..4727
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 8.11 cM"
     gene            1..4727
                     /gene="Pom121l2"
                     /gene_synonym="Gm24"
                     /note="POM121 transmembrane nucleoporin like 2"
                     /db_xref="GeneID:195236"
                     /db_xref="MGI:MGI:2684870"
     exon            1..4727
                     /gene="Pom121l2"
                     /gene_synonym="Gm24"
                     /inference="alignment:Splign:2.1.0"
     CDS             381..3299
                     /gene="Pom121l2"
                     /gene_synonym="Gm24"
                     /note="isoform 1 is encoded by transcript variant 1;
                     POM121-like protein 2; POM121 membrane glycoprotein-like
                     2"
                     /codon_start=1
                     /product="POM121-like protein 2 isoform 1"
                     /protein_id="NP_001156400.1"
                     /db_xref="CCDS:CCDS49217.1"
                     /db_xref="GeneID:195236"
                     /db_xref="MGI:MGI:2684870"
                     /translation="MGSYLGKAGSSPRSPAQGRADSGEKPASRRPARPLYQVHRVQHV
                     HRAQPARRHRPARRPPNWDPANPTAFVSEAWRRFPMKRPQNPIMGSLPSDWWESYLKR
                     NIWSLRHPRATWSPVTVKISPPERRPRPLFPVSRVVNSAGPSEEPPGPCGKDPVLRAL
                     LQCRKGRARWEEPLFPDTSDSQRHSASVWSAFKPLLKSGATVSFVARPGSLKRRPHVQ
                     SSDDKCKRSGCFSGALVASIHTQGPPSTKRNAITSSYSSSRELSGSWKRHFLRTLVQT
                     PEWPLKKAGESPNSHLSVTPSSSGQLNGEIPLLQSGPRDLLTIPCQQGPVVTEEDPTL
                     EGQAVPSNQTTEATTGTAGDSIPEMRAGIQPTLSLSRSSSERVLSTHVNPQLESLKNM
                     PAPLGCSQLEHIQGISSDSNPSIASTQASPSSPTTPVTDSTWLSSIPRAHRSAVPPHS
                     SVINPTAPTTQSTLVGVVSNPILHLPASVLPVETSSHLALRPIWGPVHSTEVRTASYS
                     RISVMAEASSSSSPSTTPGILRPTFKPIFGSIEPLQTMSETAPVHTRQPSSSLSSDST
                     HLFHSLATTAPCVVTSVIPASKSKDPGVDLNIVTSTTGNSCSVPSCSTFLLGASQNFP
                     SATDLIFPSQHPTIPTVHTVTIFSQVLTSAIKISPLRSTDTLKGVSNPLATLGLSSTN
                     QPPVTSSNSNVTSALTSSLGSSPKPLLPPSQRNTSQSSPGAIDGLKQSSLQLAPAQSF
                     STSFLSENSGVSPTPSAQLVLSKTTQPACGQLTSSAPIIHTPATSQTGFGSTLAGFPF
                     GKASSTALRVIRQNHQSVTYSSVFGSTAPRPFAFGGLVMPMDCGEPEVIVAAPKRSTS
                     GTRQSMTPSTLAPFVQCWNQSMQGPPNQITPLAGIPARKIMSGAPSLVPFAQSIPVPG
                     AIKAGSSLGFGMSSPTVQGSVGRNPLRSLEPSFCIGTKSKTLRNREPGRSRKHHTYKK
                     "
ORIGIN      
        1 gtgccctctc gagcacaccc actcgttccc tcgtacgttc actcgtacga tgaagggatt
       61 caaatcaccc agagtcgctt ccagctcaga gtttggggaa ctgggacgcg caccaatgcg
      121 catccaggtc caaggccggg tcctgcctgg atgctagaca ccgagccccc atgagctctg
      181 ccagtgtggt gctcagaccg cagatcccag agcgggctga cgtggttgcc gtggcccgcg
      241 tgtcgccagc tccccagttc cctcgcgctt ttctggcgct cgtggcccaa ccgtcactcg
      301 agcagcggat gcttggattc ggccgcctcc gccgaggttg aaacggggct agaagtcacc
      361 gcccgtccgc gcctctcagc atgggcagct acctgggcaa agcggggtcc tcgccgcggt
      421 ccccagcaca ggggcgcgca gactcagggg agaagcctgc gagccgccga cccgctaggc
      481 ccctctacca ggtccaccgg gtgcagcatg tccaccgcgc ccagcccgct cggagacaca
      541 ggccggcccg gaggccgccc aactgggatc ccgccaaccc taccgctttc gtcagtgagg
      601 cctggaggcg cttccccatg aagaggccac agaaccccat catgggctct cttccttcag
      661 actggtggga aagttacctg aagcgtaata tttggtccct tcgtcaccct cgggccacat
      721 ggagtccggt gacagtcaag atctcgcctc ctgagcggag accacggccc ttgttcccgg
      781 tctcaagagt ggtgaactcc gcgggacctt cagaggagcc accagggccc tgtggaaagg
      841 acccggtgct gagggccctc ctccagtgca ggaagggcag agccaggtgg gaagagccac
      901 tgttcccgga cacctccgac agccaaaggc attcggcctc cgtatggtcc gcctttaagc
      961 ccctgttgaa aagtggggcc actgtttcgt ttgtggccag gcctgggtct ctgaaaagga
     1021 gaccccatgt ccagagctca gatgataaat gtaagagatc cggttgcttc tctggggccc
     1081 ttgtggccag catacatacc caaggccccc ccagcacaaa aagaaatgct attaccagtt
     1141 cttacagttc ttctagagag ctctcaggat cttggaagag acattttctc aggacattag
     1201 tccagactcc agaatggcca ttgaaaaaag caggagagag tcctaattct cacctctcag
     1261 tcacacccag cagctctgga cagctaaatg gagagattcc tctactgcag tctggcccta
     1321 gggacctgct aactatacct tgccagcaag gtcctgttgt cactgaagag gacccaacat
     1381 tagaggggca agctgtgccg agcaaccaaa ccacagaagc tacaaccggg acagccggag
     1441 actccattcc agagatgagg gctggaattc agcctacctt gtctctcagt cggtcgtctt
     1501 ctgagagagt tcttagcacc cacgtgaacc ctcagctgga aagcttgaag aatatgcctg
     1561 ccccactcgg gtgctcacag ttagagcaca tccaaggcat ctcttcagac tcaaatccct
     1621 caattgcttc cacccaggcg tctccaagct ctcccacaac accagtcact gattccacct
     1681 ggctatcttc aatccctcgg gctcacaggt ctgctgtgcc cccacactca tctgtcatta
     1741 accccacagc acccaccaca caaagcactt tggttggggt ggtgagtaac ccaattctcc
     1801 atcttcctgc atctgtactt cccgtggaga cgtcttctca cttagcatta agacctattt
     1861 gggggcctgt tcacagtact gaggttagaa ctgcctcata ctccagaatt tctgtcatgg
     1921 ctgaggcctc ttcaagctct tctccctcta caactccagg tatcttaagg cccaccttca
     1981 agcctatctt tggcagtata gaaccgcttc aaactatgtc tgagacagct cctgtgcaca
     2041 ccaggcagcc ctcttcttca ctgagttctg attctaccca tcttttccac agcctagcca
     2101 ccacagcccc ctgtgtggtt acgtctgtca ttccagccag caaatccaaa gaccctggtg
     2161 tggatttgaa catagtgacc agcaccacag gcaactcttg ctctgtccct tcttgcagca
     2221 ctttcctgct tggagcttcc cagaactttc cctcggccac tgatttaatt ttcccttccc
     2281 aacaccccac aattcccact gtacacacgg tcactatctt tagccaggtt cttactagtg
     2341 ccatcaagat atcccctctt agaagcactg atacactgaa gggggtgagc aaccctctgg
     2401 caactttggg cttatcgtcc acaaaccagc ctccagtgac ctcaagcaac tccaatgtga
     2461 cttcagcact cacatcatct ttggggtcaa gcccaaagcc acttttgcca ccatcccaaa
     2521 gaaatacttc tcaaagctca cctggggcca tagatgggct aaagcaatct tctctccagc
     2581 tagctcctgc ccaaagcttc agtacctctt tcctttcaga gaactcaggt gtgtctccaa
     2641 ccccatctgc tcaactggtc cttagcaaga ccacacagcc agcttgtggg cagttgacat
     2701 cgtcagctcc cattattcac actcctgcca ccagtcagac aggctttggc agcactctgg
     2761 ctgggtttcc attcggcaaa gctagttcaa ctgcccttag ggttatcagg cagaaccacc
     2821 agagtgtgac ctacagttca gtttttggca gcacagcccc aagacctttt gcttttggag
     2881 gattagtgat gcctatggat tgtggggagc ctgaggtcat tgtggctgcc cccaaaagga
     2941 gcacttctgg cacaagacag agtatgaccc caagcaccct agctcccttt gtgcaatgct
     3001 ggaaccagag tatgcagggc cctcctaacc agatcacacc tttggctggc attcctgcaa
     3061 gaaagatcat gtctggggcc ccctccctgg tcccctttgc tcagagtatc cctgtacctg
     3121 gagcaattaa ggcaggtagc agtcttggct ttgggatgtc ctctcccact gttcagggtt
     3181 ctgtggggag aaatcctttg agatcattgg aaccttcatt ctgtattggt acaaaatcaa
     3241 aaacactaag gaaccgagag ccagggcgct cccggaaaca tcacacttac aagaaatagc
     3301 ccactctctc tgtcacactg caacagagtc ttgatctctt ccaactctct ataacaaaca
     3361 tacctaagac caaaaagtga aagctatagg tgttcccttc atgtgtcata atctaagtct
     3421 tccaagaagg taaaccacca gtacgtcatc aagtgctggc aaagaatggg gctgctcaag
     3481 actaaaccac agaagcagag tagaaacttt gatgcccttt ccacccactc ctctctgtga
     3541 cctccatgtg aggaatggtc atggcaggaa gacaacaagc atctctgggt gaagataggt
     3601 tcgttctaca tcttaacctc cctgcatttg gctctaagaa gtgcttgcct gtctttaatc
     3661 tcatagagac accatgttct cagttcccag tgctcatttc ttggtggttt cctgagagtc
     3721 tttgggtgtg atctgatctg tgttcatcct gtacttgagg atcaagatta tctgatttcc
     3781 ttgtgtgttg ctctttgccc caccttctct ataaagttga tccagactta ccccaaagag
     3841 gtagtggctt agcccccatc cttcattagg tcaattcaat gtacaagact aactaatgaa
     3901 gattcaccct gtcagacctg aaagaaaggt catctctcag tacagcaagg ggaggctcca
     3961 ggatcaaagc cagccgatct ctgttttcta tctactagct tctccacttg ctgccctcca
     4021 cttggccttc atggagattt aatcttctca ctctgttaga ttctggtgtg tgtggtgttg
     4081 ggtttggagg aagagtgatc tgtaggagtg gtatgaagtt ggcaaagcca aatttcaatt
     4141 gcataaaaat ccttctgcat cttggctgat gggagcaaac agcactgctt caggctgcaa
     4201 ggctgactcc cccctaagtg cacagctgca gcgtgacctt actggatgga ttttcaggga
     4261 gccagaaggc aggggagaaa gatggccagg atgctgaagc cttctttcta gtccctacat
     4321 catggcctac atgctaggac ccgcaaatgc ccaagtacag aaactaaacc tgacatttca
     4381 ttttcacttt ctttttttat ttggtgcttc atcaaatcaa ccctttctat agtcacatct
     4441 ctctccaaga gggttagcag agtgcgaagc ccttaggcca agcaacaaag catgaaaagg
     4501 tgaaaacagc aggcatttca gctgactcta gctctcaagc caggaggaag tgcatgagta
     4561 agctggatat cttccttagc acttcttagc acgcacacac actagaacca tgcttctttg
     4621 ggcacattta ttacattttt tttattttat ggataccttg gagaaaatct aattgaaaaa
     4681 gtaattgaca tattgaatga taaaataaaa atatattgtt gaaaaaa
//
