LOCUS       NM_178627               3301 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus polymerase (DNA-directed), delta interacting protein 3
            (Poldip3), transcript variant 1, mRNA.
ACCESSION   NM_178627
VERSION     NM_178627.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3301)
  AUTHORS   Gehman,L.T., Meera,P., Stoilov,P., Shiue,L., O'Brien,J.E.,
            Meisler,M.H., Ares,M. Jr., Otis,T.S. and Black,D.L.
  TITLE     The splicing regulator Rbfox2 is required for both cerebellar
            development and mature motor function
  JOURNAL   Genes Dev 26 (5), 445-460 (2012)
   PUBMED   22357600
REFERENCE   2  (bases 1 to 3301)
  AUTHORS   Folco,E.G., Lee,C.S., Dufu,K., Yamazaki,T. and Reed,R.
  TITLE     The proteins PDIP3 and ZC11A associate with the human TREX complex
            in an ATP-dependent manner and function in mRNA export
  JOURNAL   PLoS One 7 (8), e43804 (2012)
   PUBMED   22928037
REFERENCE   3  (bases 1 to 3301)
  AUTHORS   Liu,L., Rodriguez-Belmonte,E.M., Mazloum,N., Xie,B. and Lee,M.Y.
  TITLE     Identification of a novel protein, PDIP38, that interacts with the
            p50 subunit of DNA polymerase delta and proliferating cell nuclear
            antigen
  JOURNAL   J Biol Chem 278 (12), 10041-10047 (2003)
   PUBMED   12522211
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL591952.9.
            
            On Mar 19, 2018 this sequence version replaced NM_178627.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK083924.1, BC058225.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-184               AL591952.9         132027-132210
            185-575             AL591952.9         142883-143273
            576-662             AL591952.9         143851-143937
            663-758             AL591952.9         146016-146111
            759-938             AL591952.9         148079-148258
            939-1016            AL591952.9         148751-148828
            1017-1146           AL591952.9         149795-149924
            1147-1213           AL591952.9         152145-152211
            1214-3301           AL591952.9         153350-155437
FEATURES             Location/Qualifiers
     source          1..3301
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 39.4 cM"
     gene            1..3301
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /note="polymerase (DNA-directed), delta interacting
                     protein 3"
                     /db_xref="GeneID:73826"
                     /db_xref="MGI:MGI:1921076"
     exon            1..184
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     exon            185..575
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     exon            576..662
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     exon            663..758
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     exon            759..938
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     exon            939..1016
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     exon            1017..1146
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     exon            1147..1213
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     exon            1214..3301
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3272..3277
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /note="hexamer: AATAAA"
     polyA_site      3293
                     /gene="Poldip3"
                     /gene_synonym="1110008P04Rik; mKIAA1649; PDIP46; SKAR"
                     /note="major polyA site"
ORIGIN      
        1 ttttcgtttg agctgtcgcg agagttggcc gtccgggttg ccggaagccg ctcttgactc
       61 cggccgcggg gcgggctcgc cgcagtcggc ttctcctccg ttctccgcta gctgcgcgcc
      121 gcaagatggc cgatctctcg ctggacgagc tcatccggaa gcgcgggacg gcggccaagg
      181 gacggctcag tgtcaggcca ggaattggag gtgtccggtc tcgagttgga atccagcata
      241 gtcttgttaa ccagccagct cgcacagcca ccttccagca gagatttgac gcccgacaga
      301 agattgggct ctcagatgct cggctcaagc tgggtgtcaa agatgcccgg gaaaagcttt
      361 tgcagaaaga cgcccggttt cggatcaaag ggaaagtaca ggatgccagg gagatgctga
      421 actcacgaaa gcagcagggc actgtgcccc agaagccccg ccaggtggct gatgcccggg
      481 agaagatcag cttgaagagg agatcccctg ctgcgttcac aagcccgccc attgggactg
      541 taaccccagc tctgaagctc accaaaacta tccaggttcc acagcaaaag gccatggtgc
      601 cacttcatgc ccatcctgct ggaatgagga tcaatgttgt caataaccac caggctaaac
      661 agaacttgta tgacctggat gaagatgatg acattgtggt gcctgtccct cccaagcaga
      721 tgaagtttgc agccacgggc agccttgttc accacatgac tggactgagc agttccaagc
      781 tgtccatgtc caaggccctc cctctcacaa aagtggtcca gaatgatgcc tacaccgctc
      841 ctgttctccc ctcctctgtt cgaaccaaag ccttgaccag catgtcccgg acgctggtga
      901 acaaggagga gcctcccaaa gagctgccgc ctgctgagcc tgtgcttagc cccttggaag
      961 gcaccaagat gaccgtgaat aatctgcacc cccgagtcac agaggaggac atagttgagc
     1021 ttttctgtgt gtgtggcgct ctcaagcggg ctcgactggt ccatcctggg gtagcagaag
     1081 ttgtcttcgt gaagaaggat gacgccatca ctgcttataa gaagtacaat aaccgatgtc
     1141 tggatgggca acctatgaag tgcaaccttc acatgaatgg aaatgtcatc acctcagacc
     1201 aacccatcct gctgcggttg agtgacagcc cctcagtgaa aaaggaaagc gagctgccac
     1261 ggaggggcaa ccctgcctct tccaaccctc ctgccgaagt ggaccctgac accgttctca
     1321 gagcgctctt caagtcctcg ggggcctctg tgaccacaca acccacagaa ttcaaaatca
     1381 aactttgagg aggggagcga ggcagccaga aacagggcag aggagggtgg ctctgtttcc
     1441 caaggcaaag ttgagaccaa tgggctgtcg gactgaagcc ccctgaacaa gggatgaggt
     1501 accagggaga gcttcctcgc tggacgggac ccacctttct gtgttgttta caccttgccc
     1561 ttctgtgcgt tccatttctg tagtatgttt cctctttcct ccattcatca tcaaggtagg
     1621 ctgtgtttgt cggtgtgcct cccctgccct cggcccctag ctgatttctc ccctagatat
     1681 ggtgcactgt ttccctgggt ggccttcttg tggccccatg ggccacaggg tgcaggaacg
     1741 tattggaaag actgcttttt tttttttttt aattttttta aaattttttt tatgttttgt
     1801 tttcaagagt tttcttgttc tgttgaagtt ttcacacaaa acggaatgaa tgggacctcc
     1861 tgccattcag tgagcactag gacagctggg acctcctgcc attcagtgag cactaggaca
     1921 gctgggacct cctgccattc agtgagcact aggacagctg ggacctcctg ccattcagtg
     1981 agcactagga cagctggggg ctgcgtcagg ctactggctt cctgtgttct caccactgtc
     2041 cctctagccc tgactgcaag tatgcagtgc tggatgacgg gcagtgtgca aggcatccca
     2101 gcattcatgg tcccttgtta gtgttgtgcc aaaggccttg ggtcagttct ctcagcttcc
     2161 atatggaagt gaggaaggga cctgtgccta ttagccctct tgattctcac ctgatagggc
     2221 aacatcaaag cttggtgtgg gtgtgggtgc cagctccaag ttggctgagc ctttttccag
     2281 gttctacccg ggcgcctctg tgtgttctac agcacagagg acttcgggga gattgattgg
     2341 atcagagcca ttggctggct ctggctctgc ttttctgcct tcagttatct acagaacagc
     2401 aggtttgcct gaagtgcagc cttcaccagg gcattgtctc tgctggtgtc agtgacccac
     2461 attgatgagt ggtctgagca gctggtgggt tactttaccc agtgtgttcc tgcattgttt
     2521 agtgtggaac tgtgggcagg tgccgagtgt cagatagcat cggtccagag ctcgtcagag
     2581 gcccctgaca gtggaaacag aagatgctaa gctgtcatag gtggagcagg atcctaagga
     2641 cgcacaatat cagttgtgcg tgctgtaaag ggacaaaccg aggaagtaga ggaagctgcg
     2701 gcactgtgac ccattcaagg ctagcacagt taagagaact tcagctaatt cttattttcc
     2761 tgagttagat cccagcccat gcccagctgg aagggtctct tttgggtcaa aatcagtcct
     2821 tcagctctaa ggttgcccag caaaggaatc taggaatgac aactgcagtg tccactccta
     2881 aacacctcct tctcttacac ccttcgaaat gggtacaaac ttaattcttc tcagaaactg
     2941 gaagacattc ctctgtgttt gccccttcct gacccaagag acaccctata catgagggcc
     3001 cagctcttta cctctgggga cagctggcat gcctttggct ttgtgtagag tagggtggtg
     3061 agacccttcc tggctcccct gctttgtgag ttaggcgtgc tggggcaccc tcctggccag
     3121 gtggtacttt ggggacttgg gtgtttgcat cataatgtca tcttgggaaa cagaaaagaa
     3181 ggtgggccaa ccctcatgtc ccccactccc ttgcattatt tctttgtgtc ttgttcagga
     3241 gaaaagaggg ccttgttact ttccacttct caataaatgt ttgttattcc taactttgag
     3301 c
//
