LOCUS       NM_029427               1694 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus patatin-like phospholipase domain containing 5
            (Pnpla5), mRNA.
ACCESSION   NM_029427 XM_001003537 XM_128189 XM_906591
VERSION     NM_029427.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC109360.2.
            
            On or before Oct 9, 2006 this sequence version replaced
            XM_128189.3, XM_906591.2, XM_001003537.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC109360.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 39.78 cM"
     gene            1..1694
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /note="patatin-like phospholipase domain containing 5"
                     /db_xref="GeneID:75772"
                     /db_xref="MGI:MGI:1923022"
     exon            1..255
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..1361
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /EC_number="3.1.1.3"
                     /codon_start=1
                     /product="patatin-like phospholipase domain-containing
                     protein 5"
                     /protein_id="NP_083703.1"
                     /db_xref="CCDS:CCDS49685.1"
                     /db_xref="GeneID:75772"
                     /db_xref="MGI:MGI:1923022"
                     /translation="MDFLEAEGGWNLSFSGSGYMGLYHVGVTQCLRQRAPRLIQGARR
                     FYGSSSGALNAMAIVFGKSADFACSNLLDLVKLVERLSLGIFHPAYGPAEHIRKKLYE
                     NLPDNCHILASQRLGISMTRWPDGKNFIVTDFATRDEFIQALICTLYLPLYCGVIPPA
                     FRGQRFIDGALSNNLPFSDCPTTITVSPFNGTVDICPQNISHSLFELTAFNASFQIST
                     RNFFRGLKSVFPPKPEVVADHCRQGYLDALRFLERRGLTKEPVLWSLVSKEPPALVEG
                     PRGTGHDQGQKTGPTVRWDIPNVLVKDVPNFELLSPELEAALRKACKRDFWTRVQCSV
                     PGKVLAYLLLPCTLPFEYAYFRSRRLMEWLPEAPDDLDWMRSILKSTTLEVYSMAKSW
                     LLRLGSPPGTRADSGLLRQQRGTAPSGNRPLNHRWFPGMD"
     exon            256..488
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     exon            489..554
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     exon            555..764
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     exon            765..825
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     exon            826..1011
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     exon            1012..1138
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     exon            1139..1255
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     exon            1256..1339
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
     exon            1340..1694
                     /gene="Pnpla5"
                     /gene_synonym="4833426H19Rik; GS2L"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagttcctt cctttgagct ccagctgagg agtctgcagc cccgcgtccc aagcacccta
       61 ttatggactt cctggaggca gagggaggtt ggaacctgtc cttctcaggc tctggctaca
      121 tgggcctcta ccacgtgggt gtcacccagt gtctgcgaca gcgagcgcct cgcctcatcc
      181 agggtgcccg ccgcttctat ggctcctcct caggggcact caatgccatg gccattgtct
      241 ttggcaagtc tgcagacttt gcctgctcca atctcctgga cttggtgaaa cttgtggagc
      301 ggctgagcct gggcatcttc catccggcct acggacccgc tgaacacatc aggaaaaagc
      361 tgtatgaaaa tcttcctgac aactgccata ttctagcctc ccagaggctg ggcatctcca
      421 tgacccgatg gcctgatggc aagaatttca tagtcaccga ttttgccact cgggatgaat
      481 tcatccaggc tctgatctgc accttgtatt tacccttata ttgtggggtg atccccccgg
      541 cattcagagg ccagcgcttc attgacgggg ctctgagcaa caacctgccc ttctccgatt
      601 gccccaccac cattaccgtc tctcctttca acgggacagt ggacatctgt ccccagaaca
      661 tatcacatag tctttttgag ctaactgcct tcaatgccag tttccagatc tctaccagga
      721 acttctttag ggggctcaaa tctgtgttcc cccccaagcc tgaggtggta gctgaccatt
      781 gccgacaagg ttacctggac gccctgaggt tcctggagag acggggactt accaaggagc
      841 cagtgctgtg gtcgctggta tctaaggagc ctccagccct cgtggagggg cccaggggca
      901 ctggccatga ccagggccag aagactggcc caactgtcag gtgggacatt cccaatgtgc
      961 tagtcaagga tgtgcccaac ttcgagctgc tgtcaccgga gctggaggcg gcactgagaa
     1021 aggcatgcaa gagagacttc tggacccgtg tccagtgttc agtgccaggg aaggtgctgg
     1081 cctacctgct actgccctgt acactgccct tcgagtatgc ctacttccgg agcaggaggc
     1141 tgatggagtg gctacccgag gctccagatg acttggattg gatgaggagc atcctgaaga
     1201 gtaccaccct cgaggtctac tccatggcca agtcatggct tctcaggttg ggcagcccac
     1261 ctggcacccg agcagactcc ggtctcctcc ggcagcagcg ggggacagct ccttctggga
     1321 acaggccctt gaaccacagg tggtttcctg gcatggactg agagcccacc ctctgcagct
     1381 gttcctggga ccttgatctc caaggcctct ctggatgctt ccagcctact gtgtgctcag
     1441 gccactgttc tcttcttgtc agttttgtca gagaagaaaa gacaacaagc tgagacacac
     1501 ctcagttctg gatcttcatg tgagagacac agccaggtgt ctagcagagg tgtgttctgc
     1561 actaggctgg aactggagat ggtgccccag ggctctgatc atggtattga ctgctctaac
     1621 tgggctcctt tctctgaccc acacttatct gagggattga tccctgtgat agtgaggatg
     1681 gaaggtggct ggct
//
