LOCUS       NM_001007569            4106 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus PNMA family member 8A (Pnma8a), mRNA.
ACCESSION   NM_001007569 NM_029149 XM_194334
VERSION     NM_001007569.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4106)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK079661.1, BC048228.1, AC148976.3 and BQ175886.1.
            
            On or before Feb 13, 2018 this sequence version replaced
            NM_029149.1, NM_001007569.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC048228.1, SRR1660815.97651.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN00849389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-116               AK079661.1         1-116
            117-1803            BC048228.1         1-1687
            1804-3713           AC148976.3         24325-26234
            3714-4106           BQ175886.1         1-393               c
FEATURES             Location/Qualifiers
     source          1..4106
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 9.15 cM"
     gene            1..4106
                     /gene="Pnma8a"
                     /gene_synonym="0710005I19Rik; 4930488B01Rik; Pnmal1"
                     /note="PNMA family member 8A"
                     /db_xref="GeneID:71691"
                     /db_xref="MGI:MGI:1918941"
     exon            1..213
                     /gene="Pnma8a"
                     /gene_synonym="0710005I19Rik; 4930488B01Rik; Pnmal1"
                     /inference="alignment:Splign:2.1.0"
     exon            214..1502
                     /gene="Pnma8a"
                     /gene_synonym="0710005I19Rik; 4930488B01Rik; Pnmal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1503..4090
                     /gene="Pnma8a"
                     /gene_synonym="0710005I19Rik; 4930488B01Rik; Pnmal1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4071..4076
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pnma8a"
                     /gene_synonym="0710005I19Rik; 4930488B01Rik; Pnmal1"
                     /note="hexamer: AATAAA"
     polyA_site      4090
                     /gene="Pnma8a"
                     /gene_synonym="0710005I19Rik; 4930488B01Rik; Pnmal1"
                     /note="major polyA site"
ORIGIN      
        1 ggagaccgcc ggggatgcgg atctgaggac cttgtgcagg aagcaagtgc gcatgagtga
       61 tcttcaacgc cagctggcca gctcggtata gatcaaggct gtgtgacctg tgctgactgg
      121 agctgaagca tagggacgga gtcctggcct ctttggggcc agagcctgcg cttgggaaag
      181 cagctgtgct ccaggctcct agctttgacc tgggtagagc agaaagatgt cggagcccgt
      241 ggccatgacc ctgctggaag attggtgcag gggcatggga atggacatcc acagatccct
      301 gttggtcact gggatccctg agtactgtag ccacgcagaa attgaggaga ccttgaatgg
      361 ggtcctcttg ccactgggca cataccgtgt gctcaacaaa atttttttga ggcaagagaa
      421 cgtgaaggct gctctagttg aggttagcga gggtgtgaat ctgagctcta taccccggga
      481 gttcccaggg aggggcggtg tctggagagt ggtctgcagg gatcccaccc aggacgacga
      541 ctttttaaaa aatctgaacg aattcttgga tggcgaagga cgcacttggg aggatatggt
      601 gcgcctcttg aagcttaacc ctaacccacc gctaccgaat tcaaaccagc ctccaccgaa
      661 ctgggcagaa gccctggggt tgctcctggg tgcagtagta caggtcatat tctacatgga
      721 tgctgcaatc cgtagtcggg atgaagaagc aagggctgag gaggctgctg aggctgagtt
      781 gatggaggct tgggcttcca cagcgaggaa gagagtaaag aaggaacccg ggctgggcgt
      841 cgaagtgggc tcagctttca agatggagga ccgaaactat tggaagaaca cagaggacca
      901 tggtgaccct ccaaaacctc tagttcgcag gcctggaggt aagattcgct ccaggaggag
      961 gaagcagaaa aaaaatctta agcaagagcc aatatgctgg aggaaatccc agggcagcaa
     1021 ttacaacagc aattacaata aggttaattt ggaagctggt gaagctgccc agagctcaga
     1081 gatcccagag tctgtcaaga gcaacaaaaa accctttgtg aagcaggaag agacagtatg
     1141 gaagaagaaa agagtctgga gggatcccag cgatcttcct cggtctgcgc tgcctgcagc
     1201 tgacagcccc gggaacctag aggattcaga tcaagatggt ggaccggaga accccgcaaa
     1261 gaagaaagcc atgacctggg cctctaacaa gatccctgtc cccacgagga agaagaagaa
     1321 gatggtgagc ttgggcactc tctcctatgt cctgcttgat gctgaagcca ccaagaacaa
     1381 aacagcgatt ctgaagaaag ggcttggtgc tagaagggct gtgtcggtac ctcatgatgc
     1441 acctgcttca acatccaggc ctcagaagac caagctggga gccttccctc gagtctccaa
     1501 agattccagg aagctatgat ttggggaacc ctgtacccac ggaggtgaga gagcatcaag
     1561 gaagaagact caagttggaa gagaactttt tctttgtggt tgaataaaac ctgactgtga
     1621 accgttgggg gcccagtgtg cctgtgtggg tcagactcac acaggcaatg gatgtaaggc
     1681 cttaggttgg gggatactgt cagggggaga ttccctctgt gtcttttcct gagttggagc
     1741 cacttttcat ttctgcacag cctcaaaggt ggacaaggta ataaatagct ttggaaaatt
     1801 ctagaacgtt ctttcccttt gcccacaaag gggctcacgg tattgcgcac ccacattcag
     1861 cctttattct cttctacccc tgctttttct tctggaggca tagcttgcct gctcggcctg
     1921 cggcccagaa gggcatgtag acattttgtt ccttgcactg tacgaatttg gtaagtcaga
     1981 ccttgctctt tgaagcttgc tgtgtggatt cttcagtgtt caccctccag cagcctaaat
     2041 ggaaattgag atcctgagag ttagttctgg gaaaaaaaca aacaaacatc tgcctgccct
     2101 tgaatccttc agttttcatt gtctttgaag aaaactaggg gcaaggaaga tggttcagtg
     2161 cataataggg cttgcagtgc aagcttaagg acctgagttc taatccccag gactcacata
     2221 aaagtctgtg cctgtaacac cagcatcagg tggtgcagac aagtagaccc caagagcttg
     2281 ctggccaacc agcctatctg aaatagtgaa cttctgggct ggggaatccc ctagtgaggg
     2341 gataggggca tggctccgtg gtagagcccc tgttctgaat tccccaataa ggggctgcag
     2401 gcagggttca gtgatagagc ccctgcctag aatcccctag tgaggggttg gcgcggctca
     2461 gcactacacc ccttcccaga atcccccagt gaggggctgg gagtgggctt agtgagcttc
     2521 tgcctagcat atgcaaggcc ctgggttcca tctccagaac caataaaaaa caaaatggaa
     2581 taaaaatggc actttagttc ccaaatgcgg tgataccctc tttagaagcc tgtggtggaa
     2641 aggagaggtt gatagaatta aatttctagc tctaattccg ttgacctcta tctttgaggc
     2701 ttaaataagt tgctcacatt atagtcagaa gaagaaaatc tgtctctttt taaaagtttc
     2761 tttaaaatga gctgatctct accttctgaa tttagtgctg ccattaaatc tgaccatgcc
     2821 tcattctgtg tgcctgtaaa ccagagagga tggtgccacc cccatctgtg gtttctaaat
     2881 tatatcctga ggactccttt ttcatgttta aaagcatgaa agagaggctt cagatatggg
     2941 tgagtgggaa aaggggtttg acatcaagcc cgagtccctg ggttcgatcc ccaggaccca
     3001 catcacggaa agaaagaggt gacccctgaa agttttgttc tgacctccac atttattcca
     3061 tggcacatgc atacccccat aaataaatat aattaaaaat tatgtgtgga agaagcaaag
     3121 gtgttggtgt gtggccgtaa ccccagcatg tggagcctga ggcaggagaa tgtctctgaa
     3181 ttcaaggcca ggttgggcta cagagtaata tcctgtctca aaataaataa gtaaataaga
     3241 acagtttttt taaagtgtgg gaaaacaaca actcagttgt gttgtaatcc aaaatactgc
     3301 tgtattccct tgtgtgtata aataactgta tctggttatc cacactgtgc tttgcgtaca
     3361 attgtatttt cctttgtgta tgtgtgtgtt catctatgca tatgtgcatg tgtgtgtatg
     3421 tggaggcaga ggattaccta gggtgtcact cttcggccac cagccacctt tttatgagac
     3481 agggttctct cactggcttg aaactggcta gcatgctagg ctggaccgga actgcagggc
     3541 tctcctgtct ctgcctcccc agctctaggg ctacaagccg gcgctaccat gttctttttc
     3601 tttttgcaca ggttctgggg atcaaactca attcctcatt cgtgcaacat gctttcccta
     3661 ctgggctgtc cctgccaccc cctaatgaag tttcttgtaa atgtgaactt tgaggagaag
     3721 ggtcggaagg tgtggaaggg attggatccc ctgcatgtcc tgtaacaata tcctgagtga
     3781 gtttatgcat ctctgtgtct ccatctcctg ttcagccgtg attgacatta gggtcactag
     3841 ctaataatct gggctaacct gggacagcga aggatttctg gcctggattt ccagccctct
     3901 cgagatttca tgaccactcc caccttcagt tttcttgatc taaaaactct tgtcagtgag
     3961 tcagtcaacc accagacacg tttcttgtgg taaaccttga gactcgatta catctttgtt
     4021 gaagtagtac atcggtacaa ctatcaatga atgtaaatgt gtgagtgtaa aataaagctg
     4081 tgtaaatgaa aaaaaaaaaa aaaaaa
//
