LOCUS       NM_001100461            2290 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus paraneoplastic antigen family 5 (Pnma5), mRNA.
ACCESSION   NM_001100461 XM_001474292 XM_001474772 XM_001479236
VERSION     NM_001100461.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Zhang,X.L., Liu,P., Yang,Z.X., Zhao,J.J., Gao,L.L., Yuan,B.,
            Shi,L.Y., Zhou,C.X., Qiao,H.F., Liu,Y.H., Ying,X.Y., Zhang,J.Q.,
            Ling,X.F. and Zhang,D.
  TITLE     Pnma5 is essential to the progression of meiosis in mouse oocytes
            through a chain of phosphorylation
  JOURNAL   Oncotarget 8 (57), 96809-96825 (2017)
   PUBMED   29228573
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK220432.1, AK141385.1 and BX524422.1.
            
            On Jan 5, 2011 this sequence version replaced NM_001100461.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BX524422.1, AK141385.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1359              AK220432.1         1-1359
            1360-2280           AK141385.1         360-1280
            2281-2290           BX524422.1         472-481
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 37.29 cM"
     gene            1..2290
                     /gene="Pnma5"
                     /gene_synonym="mKIAA1934"
                     /note="paraneoplastic antigen family 5"
                     /db_xref="GeneID:385377"
                     /db_xref="MGI:MGI:2180566"
     exon            1..1940
                     /gene="Pnma5"
                     /gene_synonym="mKIAA1934"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..1886
                     /gene="Pnma5"
                     /gene_synonym="mKIAA1934"
                     /codon_start=1
                     /product="paraneoplastic antigen-like protein 5"
                     /protein_id="NP_001093931.1"
                     /db_xref="CCDS:CCDS41004.1"
                     /db_xref="GeneID:385377"
                     /db_xref="MGI:MGI:2180566"
                     /translation="MAVALLDDWCKGMDLDPKKAVLIVGIPVQYTEAAINDALKEGLP
                     PLCAYKVIGRMFRREDEAKAVLIELPEVVDYTMMPTHIPAEGGAWEVVVKPRSPDDEF
                     MNKLIYFLRDEGRRIVDVAKALGFSTVPTGKIELKNLDQDKPKGLKSLCNNSTCYKKL
                     KVFSGSPFPGPGEESFETWLEEVTELMQLWQVSEREKKQCLLESLRGSALSIMQALWT
                     SNDSLTVEQCLKALKHIFGNKEDSKVLQFRFLQSSQKPAEKVSDYLLRLEPLLQKAVQ
                     QSPLSAHSADSIRLKHVLSQVSMTTGLRGKLSLLDQQGCPPTFLELMKLTRDEEEWES
                     TVVVEEQEQVRRDSSACEAANEVVTQAEDSREVSTQTTGEEMTSVKRRRLLWRHSAGE
                     EGQRKESGFWAESEPDEQKPYVRAQESGNERGAWAVSHPNPKEIEAQDSQEFLPVAGN
                     RDTLTKSWGSPDKGTGDMSVAEGQQGQGKAPNFLLARNDPNKQEQIPHSSVTTKWQDR
                     GECQRLKWGASMITRPQGNPDRSWDTSGSQDGEDGCSELRMPTGTEAAQGVEEPATGL
                     SWAEDTSAWEQARLGRETVPRRGGRRIQPVFRIIYTALGEPHEGSTLESFRE"
     exon            1941..2287
                     /gene="Pnma5"
                     /gene_synonym="mKIAA1934"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2262..2267
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pnma5"
                     /gene_synonym="mKIAA1934"
                     /note="hexamer: AATAAA"
     polyA_site      2287
                     /gene="Pnma5"
                     /gene_synonym="mKIAA1934"
                     /note="major polyA site"
ORIGIN      
        1 gttaggtctg ctgatagagg gagggaacaa tggccgtggc tctattagat gactggtgta
       61 aggggatgga tctggatccc aagaaggctg tgctcattgt gggcatcccc gtgcagtaca
      121 ctgaggctgc gataaatgat gctctgaaag aaggcttacc tcccttgtgt gcatacaagg
      181 tgataggcag gatgttcagg agggaagatg aagctaaggc agtcttaatt gaactgcctg
      241 aagttgttga ttatactatg atgcctactc atataccagc agagggtggg gcctgggaag
      301 tggttgtcaa accccgtagc ccagatgatg agtttatgaa taagttgatc tactttctaa
      361 gagatgaagg acggagaata gtagatgtgg ccaaagccct ggggtttagc actgttccta
      421 cagggaaaat agagttaaag aatttagacc aagacaaacc aaaaggcttg aagtctctgt
      481 gtaataatag cacatgttac aaaaaactga aagtattttc tggcagtccc tttccaggcc
      541 caggagaaga aagctttgaa acctggttag aggaggtcac tgagctgatg cagttatggc
      601 aggtgtccga gagggaaaag aagcagtgcc ttctagagag cttgcgtggc tctgccctgt
      661 caatcatgca ggcactgtgg actagcaatg actccctaac cgtggagcag tgcttgaaag
      721 ccctaaagca catctttgga aataaagagg actctaaggt cttacagttc aggttccttc
      781 agtcttctca gaaacctgca gagaaggtat ctgactactt gctacgttta gagcccctgc
      841 tgcaaaaagc agtgcagcag agcccactgt cagcacacag tgcagattca attcgtctca
      901 agcacgtctt atctcaggtc tccatgacca ctggccttcg gggaaagctc tccctcttag
      961 atcagcaagg gtgcccacct acttttctgg aattaatgaa acttactcga gacgaggaag
     1021 agtgggaaag cactgtggta gtggaggagc aggagcaggt acgaagggac agcagcgcat
     1081 gtgaggcggc aaatgaagtt gtcacccagg cagaggattc tagggaggtc agcacccaga
     1141 ccacaggaga ggagatgaca tcagtgaaac ggaggcgact gctctggaga cacagtgctg
     1201 gggaagaggg acagaggaag gaatcaggtt tctgggctga aagtgaaccc gatgagcaga
     1261 aaccttatgt tagagcacag gagtcgggga acgagagagg ggcttgggca gtgagccacc
     1321 ctaaccccaa ggaaatagag gctcaggaca gccaggaatt ccttcctgtg gcaggcaaca
     1381 gagatacttt gacaaaatca tggggcagcc cagacaaagg aacaggggac atgagtgttg
     1441 cagaagggca acagggccag ggtaaggcac ccaacttctt actagctaga aatgatccca
     1501 acaagcaaga acaaattcca cacagctcag tgactaccaa atggcaggac cgtggggagt
     1561 gtcagagact gaaatgggga gctagtatga taactagacc acagggtaat ccagaccgca
     1621 gttgggatac tagtgggtca caagatggtg aggatgggtg ttctgagcta agaatgccca
     1681 ctggcactga agcagcacag ggtgtggagg agcctgccac agggttgtct tgggcagagg
     1741 acaccagtgc ctgggaacaa gcacggctag gcagggagac agtacccagg agaggaggcc
     1801 gcaggatcca gcctgtcttc aggatcatct acacagctct aggggagccc catgagggca
     1861 gcacccttga gtcctttcgt gagtgaactc cccccgctcc tgtgaaacct gcaagcctca
     1921 ggacccaaag gacccgggag atgtgtgtgc taacctgagt tcctgagcct ggttctggaa
     1981 ccatggatgt tgacaaggct gatgacttca acttgggact atgtgtgata ttcctctcct
     2041 gttattactt ataattttac tttctagggt tggtggggtg ttgcatgcta tggttccacc
     2101 aattccctgt gcctggactg tgtatgctat aagggagaac tacactgtag tgagtgatct
     2161 cttgagatag cagaaggccc tgtgtgagca gagcctatgg cttctagtga ccactcaaag
     2221 tttctgttat gtttttaatg gttttaatac aatttttgtt gaataaatct catgaatgtt
     2281 ctggctaaaa
//
