LOCUS       NM_153169               3442 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus paraneoplastic antigen MA3 (Pnma3), mRNA.
ACCESSION   NM_153169 XM_908890
VERSION     NM_153169.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3442)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3442)
  AUTHORS   Raefski,A.S. and O'Neill,M.J.
  TITLE     Identification of a cluster of X-linked imprinted genes in mice
  JOURNAL   Nat Genet 37 (6), 620-624 (2005)
   PUBMED   15908953
REFERENCE   3  (bases 1 to 3442)
  AUTHORS   Davies,W., Isles,A., Smith,R., Karunadasa,D., Burrmann,D.,
            Humby,T., Ojarikre,O., Biggin,C., Skuse,D., Burgoyne,P. and
            Wilkinson,L.
  TITLE     Xlr3b is a new imprinted candidate for X-linked parent-of-origin
            effects on cognitive function in mice
  JOURNAL   Nat Genet 37 (6), 625-629 (2005)
   PUBMED   15908950
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC036726.1.
            
            On Mar 6, 2008 this sequence version replaced NM_153169.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC036726.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1938              BC036726.1         39-1976
            1939-3442           BC036726.1         1978-3481
FEATURES             Location/Qualifiers
     source          1..3442
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 37.29 cM"
     gene            1..3442
                     /gene="Pnma3"
                     /note="paraneoplastic antigen MA3"
                     /db_xref="GeneID:245468"
                     /db_xref="MGI:MGI:2180565"
     exon            1..3405
                     /gene="Pnma3"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1436
                     /gene="Pnma3"
                     /codon_start=1
                     /product="paraneoplastic antigen Ma3 homolog"
                     /protein_id="NP_694809.1"
                     /db_xref="CCDS:CCDS30192.1"
                     /db_xref="GeneID:245468"
                     /db_xref="MGI:MGI:2180565"
                     /translation="MPLNLLQDWCRGEHLNTQRSMLILGIPEDCSEDEFEETLHEALK
                     HLGRYRIIGRMFRREENAQAFLVELARDFDYALVPREIEGKGGPWEVVVKPPHSDDEF
                     LNRLNHFLEEERRTVSDMNRVLGTHSNHSPTKTTISADFWVWAQTLGAVMQPLLEQML
                     YRELRVFSGNTISIPGLLAFDSWLEHTTEMLQMWQVPEVEKRRRLMECLRGPALQVVN
                     VLRANNAAITVKECLEALRQVFGSVDNRKIAQLKFCKAYQEPGEKVSSFVVRLETLLQ
                     KALEKNAISRKNVNQTRLKRILGGAILSAKLREKLKMLKQRRRPPGFLALVKLFREEE
                     EEWEATRGSERSCYEGLELGPSPSNIGSEERELFVPAFGSVLEERPYQGSRRRRHRRR
                     GQHRKGGVPRDDSQGTRKQNYDTFCYSCGEDGHIRVHCFNPSNRTLVKQKRQAAMEKG
                     NRSWAWEKSHPKPKTK"
     regulatory      3384..3389
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pnma3"
                     /note="hexamer: AATAAA"
     polyA_site      3405
                     /gene="Pnma3"
                     /note="major polyA site"
ORIGIN      
        1 ctccccccac attagagtct cttgaagttg gggccatgcc attgaacctg ttgcaagact
       61 ggtgtagggg ggagcatctg aacacccaga ggtctatgct gatcctgggg attccagagg
      121 actgtagtga ggatgagttt gaggagactc tgcacgaagc tctcaagcat ctgggaagat
      181 acaggatcat cggcaggatg tttaggaggg aggaaaatgc ccaggccttt ttggtggaac
      241 ttgcacgtga ttttgactat gctttggtgc ccagggaaat agaaggaaag ggtgggccct
      301 gggaagtggt tgtaaaaccc cctcattcag atgatgaatt tcttaataga ctgaatcact
      361 tcttagaaga ggagaggaga acagtgtcag acatgaacag ggtccttggg acacactcta
      421 atcattcacc taccaaaacg actatatcag cagatttctg ggtctgggct cagactctag
      481 gtgcagtgat gcagcctctg ctagaacaaa tgttgtaccg agaactaaga gtcttttctg
      541 ggaacaccat atcaatccca gggttattgg ccttcgattc ctggcttgaa cacaccactg
      601 agatgttaca gatgtggcag gtacctgagg tagaaaagag gcggaggctg atggaatgct
      661 taagaggccc tgctctacag gttgtcaatg tgctccgtgc caataacgct gccattacag
      721 tgaaggagtg cctggaggcc ctgcggcagg tatttggctc tgtggacaac cgaaaaatcg
      781 cccagctgaa gttttgcaag gcttatcagg agccaggaga gaaagtttct agctttgtgg
      841 tgcgtttgga gaccctgctc caaaaagccc tagagaaaaa tgcaatatct cgaaagaatg
      901 tgaaccagac ccgcctgaaa cgaattttag gtggggctat cctttctgca aaacttcgag
      961 agaaacttaa gatgctgaaa cagcgtagaa ggccacctgg tttcctggcc ctagtgaagc
     1021 ttttccgtga ggaggaggaa gagtgggagg ccactagggg ttcagagagg agctgctatg
     1081 aggggctgga gttaggccca agtccctcta acataggcag tgaggagaga gaactatttg
     1141 ttccggcctt tggtagtgtt cttgaggaaa ggccttacca gggttcccgc cgccgccgcc
     1201 acaggaggag aggccagcac agaaagggag gtgtgcccag ggatgattct caaggcacaa
     1261 gaaagcagaa ttatgacaca ttctgctata gttgtgggga agatggccat atcagagtac
     1321 actgttttaa cccttccaac cggaccttgg tgaaacagaa gagacaggct gcaatggaga
     1381 agggaaacag gagctgggct tgggagaaga gccatcccaa gcccaagacc aagtaggctc
     1441 cagggaacag ggtaaccttt gttcctgtaa gccaaggaga aaaaagagat atttgaagga
     1501 gggggaagaa cagctcaaaa aaatcgcaga gaaccttaga aaggcacagg ggcaatgtaa
     1561 tcagtcagaa gtcaaggccc ctaagccaat accagctgga gaaaattcta acaaacaaaa
     1621 atccattgca ttcaactcaa taatgaccac acgcaagacc tctaagattc accagagaag
     1681 gaagcctcaa ggaactgcta cagatgtgtg gggccacaag aactcagatg ggggtgtcag
     1741 caaagtgaag gcaacttcaa gtccatatgg ggtgtggagg agcctgccac agggttgtct
     1801 tgggcagagg acaccagtgc ctgggaacaa gcacggctag gcagggagac agtacccagg
     1861 agaggaggcc gcaggatcca gcctgtcttc aggatcatct acacagctct aggggagccc
     1921 catgagggca gcacccttga gtcctttcgt gagtgaactc cccccgcccc tgtgaaacct
     1981 gcaagcctca ggacccaaag gacccgggag gcaagtgcca acacaaggca gtttccttct
     2041 tgacaccctg acaggacact agtgcctgag aaaagcccca ggctggggca catggcacca
     2101 cagggttaat gccctcagct ggcctgagag cctgggagtg tgcaggacag gttttgtgtg
     2161 agcaaacagg agcagcagaa agaggactct gtgtgtgggg cgggggcagg cagggggcgg
     2221 gggggggggg gagagtttgt tctgctctct tttgtccagg gctgctggag aattccagag
     2281 agcaagcagg gacagccagg tgaatacaac tctgccaggc agctgccaag gctggcccca
     2341 aaccctgccg acctggaggg tggcctggca gctttgccga ggtgccatcc tccatctgcc
     2401 acccataacc aaacaggtgg acatcacaga aaaggccatc tcaagggttc tgccaactgc
     2461 ctggctctcc caacacaaat gccccttcct cttccctttc ccctctcccc cttcccctgc
     2521 cactgctgtc cagaggcagg ctgccccctg ctctggaacc ccgccccctt atctgttaac
     2581 ctcatagtga cccagctgtc cagtgagtcc cttcccccat cacgtgctta cccaccatca
     2641 gctgctcctg tataaagctg tgagtgaggg caactggagg ccctgactac ctacctggtc
     2701 agccacttct acaccctggc acgtgttgtg agcttctgtg ccagcctagg ctatgctagc
     2761 tgctctctta cccacctggt gttgtgaact ccttgtcagc tttcctagtg tacatctagg
     2821 ccagctgcct gctgcttgtt ctcttgcaga tgtgtgtgtg tgcgcgtgtg ttctaacctg
     2881 atcagatgct ccccggagtt cctgagctcc gtctggaagc cagcaggaac catggatgtt
     2941 gacaagagac tggctgatgc tcatcttacg attgatttca gtctgggaca ggaagacctg
     3001 aactgggcat gggtagggcc tggggactgg gctgtgctga tcccctcctg ttgttccttg
     3061 tgactatcat tccttgggtt ggtggggtat tccttgcttt gctttgtagt ttcttgttac
     3121 tatcctgtgc cagaataggg caaggccacc ctacagtggt aatcccttgt gagagttcct
     3181 aaaagagtga ggaaatttta agaggtagct cttgggcctt tgggaaggga aaaatagcag
     3241 agggattcca tggtggtggg cagacaaggc ccatctgcga agctccagga gggtggccca
     3301 gaacctggtg cttccagtgg ctgtggagag gtcctgtgct gctaacccct tctcttcaat
     3361 agtttcagca agtgtttctg ttcaataaac ttcataaatg ttccaaaaaa aaaaaaaaaa
     3421 aaaaaaaaaa aaaaaaaaaa aa
//
