LOCUS       XM_006538184            3105 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus PNN interacting serine/arginine-rich
            (Pnisr), transcript variant X1, mRNA.
ACCESSION   XM_006538184
VERSION     XM_006538184.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006538184.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..3105
                     /gene="Pnisr"
                     /gene_synonym="5730406M06Rik; Pinsr; Sfrs18; Srsf18"
                     /note="PNN interacting serine/arginine-rich; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 ESTs, 1145 long SRA reads, 15 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 39 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:66625"
                     /db_xref="MGI:MGI:1913875"
     CDS             348..2792
                     /gene="Pnisr"
                     /gene_synonym="5730406M06Rik; Pinsr; Sfrs18; Srsf18"
                     /codon_start=1
                     /product="arginine/serine-rich protein PNISR isoform X1"
                     /protein_id="XP_006538247.1"
                     /db_xref="GeneID:66625"
                     /db_xref="MGI:MGI:1913875"
                     /translation="MWDQGGQPWQQWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQ
                     REASGQQSIVEQPPGMMPNGQDMSAMESGPNNHGNFQGDSNFNRMWQPEWGMHQQPPH
                     PPPEQPWMPPAPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGP
                     VNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPTQNRRERPPSFRDRQRSPIALPVK
                     QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKEKKATEDAEG
                     GDGPRLPQRSKFDSDEEDEDAENLEAVSSGKVTRSPSPAPQEEHSEPEMTEEEKEYQM
                     MLLTKMLLTEILLDVTDEEIYYVAKDAHRKATKAPAKQLAQSSALASLTGLGGLGGYG
                     SGDSEDERSDRGSESSDTDDEELRHRIRQKQEAFWRKEKEQQLLQDKQIEEEKQQTER
                     VTKEMNEFIHREQNSLSLLEASEADRDAVNDKKRTPNEAPSVLEPKREHKGKEKERGS
                     RSGSSSSGSSSSGSRTSSSSSSVSSSSYSSSSGSSCTSSRSSSPKRRKRPSRSRSPPA
                     KARRSRSRSYSRRVKVDSSRTRGKLRDRRRSNRSSIERERRRNRSPSRDRRRSRSRSR
                     DRRTNRSSRSRSRDRRKIEDPRGNLSGNSHKHKGEAKEQDRKKERSRSVDKDRRKKDK
                     ERDRELDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFCRSGSISVKVIRHDSRQDS
                     KKNATKDSKRHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRSLEKSQRSGKKASRKH
                     KSKSRSRSTTPPRRKR"
ORIGIN      
        1 gtcttgttca tgaagaagta gaagcatcga aaggttggag agaattacag gaacggtggc
       61 gacagcggta ttccggaacc ggagcgggta agcgacgagc agtttacccc gggggacctg
      121 ccggaggact aaagtcctct gggtcagtgt ggcgaacgga gcgggactca ggctgcgtac
      181 gctgcttggc gccaccgcca gaacctcatt ccggagaagc tccggcgtcc gcccgagaga
      241 gtgagcgaga gagccgctgt cgcccgaagg gaaccgcctt tggctaagga gagggctcac
      301 gacccattct tcgaactaag agtttccttt gagaaggagc ttaaaggatg tgggatcaag
      361 gagggcagcc gtggcagcaa tggcccttga accagcaaca gtggatgcag tcatttcagc
      421 accagcaaga tccaagccag attgactggg ctgctttggc ccaggcttgg attgcacaaa
      481 gagaagcctc aggacagcaa agcatcgtag aacaacctcc aggaatgatg ccaaatggac
      541 aggatatgtc tgcaatggag tctggtccaa ataatcatgg gaattttcaa ggggattcaa
      601 attttaacag aatgtggcaa ccagaatggg gaatgcatca gcagccccca cacccccctc
      661 cagagcagcc atggatgcca ccagcaccag gcccaatgga cattgttcct ccttctgaag
      721 acagcaacag tcaggacagt ggggagtttg cccctgacaa caggcatata tttaaccaga
      781 acaatcacaa ctttggtgga ccacctgata actttgcagt ggggccggtg aaccagtttg
      841 actatcagca tggggctgct tttggtccac cacaaggtgg atttcatcct ccttattggc
      901 aaccaggacc tccaggacct ccagcaccta cacagaaccg aagagagcgg ccaccatcat
      961 tcagggaccg acagcgttca cctattgcac ttccagtgaa gcaggagcct ccacaaattg
     1021 atgcagtaaa acgcaggact cttccagcct ggattcgtga aggccttgag aagatggaac
     1081 gtgaaaagca gaagaagtta gagaaagaga gaatggaaca gcagcgttca cagttgtcaa
     1141 aaaaagaaaa gaaggccact gaagatgcgg aaggagggga tgggcctcgc ttaccccaaa
     1201 gaagtaaatt tgatagtgat gaagaggacg aagatgctga aaacctggag gctgtgagca
     1261 gtggcaaagt cactagaagt ccatctccag ctccccaaga agagcacagt gaaccagaga
     1321 tgacggaaga ggagaaggag taccaaatga tgttgctgac aaagatgctt ctaactgaaa
     1381 ttctcctgga cgtcacagat gaagaaattt attacgtggc taaagatgcg catcggaaag
     1441 caacgaaagc tcctgcaaag cagctggcac agtccagtgc actggcctcc ctcaccggcc
     1501 tcggcggact gggtggctat ggatcaggcg acagtgaaga tgagaggagt gacagaggtt
     1561 ctgagtcatc tgacactgat gatgaagagt tacggcaccg aatccggcaa aaacaagaag
     1621 ctttttggag aaaagagaaa gaacagcagc tgttacaaga taaacagata gaagaagaaa
     1681 agcagcaaac agaaagggtt acaaaagaga tgaatgaatt tattcacaga gagcaaaata
     1741 gtttatcact tctagaagca agtgaagccg accgtgatgc ggtcaatgac aagaaaagaa
     1801 ctccaaacga agctccgtca gtgttagagc ccaaaagaga gcataaaggg aaggagaagg
     1861 agcgggggag taggtcaggc agctccagta gcggcagctc cagtagcggc agcaggacga
     1921 gcagcagtag cagctccgtc tccagttctt cctacagctc cagctcaggc agcagctgca
     1981 cgtcctctcg ctcctcatct cctaagcgga gaaagagacc cagtaggagc aggtctcccc
     2041 cagcgaaagc tagacgcagc aggagcagga gctactcgcg cagagtgaaa gtagacagca
     2101 gcaggaccag ggggaagctg agagataggc ggagatctaa tagaagtagc attgaaagag
     2161 aaagacgaag aaaccggagc ccttccagag acagacgtag aagcagaagt cgctcaaggg
     2221 atagacgaac caatcgttcc agtcgcagta ggagtcgaga taggcgtaaa attgaggatc
     2281 cacgtggaaa tcttagtggg aacagtcata agcataaagg tgaggctaaa gaacaagaca
     2341 ggaaaaagga gaggagtcga agtgtagata aagacaggag aaagaaagac aaggaaaggg
     2401 accgtgaact ggataaaaga aaagaaaaac agaaaaggga agaaaaagat tttaaattca
     2461 gtagtcagga tgatcggtta aaaaggaagc gagaaagtga gagaactttc tgtaggagtg
     2521 gttctatatc tgttaaagtc ataagacatg actctagaca ggatagtaag aaaaatgcta
     2581 ccaaagatag taaaaggcat tcaggttctg attctagtgg aaggagcagt tccgaatccc
     2641 ccggaagtag caaagaaaag aaggctaaga agcctaaaca tagtcgatcg cgctccctgg
     2701 agaaatctca aaggtctggt aagaaggcaa gccgcaaaca caagtctaag tcccgatcaa
     2761 gatcaacaac ccctccccgt cgtaagcgct gaggaatgat gtggcaagaa tgccatgatg
     2821 ctgtttttaa aaattccatg agtttaaggg cttgtctcat tatagaggca cattgtggct
     2881 gtgtaggtga aaccagattt ttttttttta ttgtgtaaat aggtgtcttt tttccaaatg
     2941 ctgctccaag ttacttaata ggatttcttt gtattacatt ttttttcaag aaatagtact
     3001 taataagact ataaatatgc catttctctt tcagctgtaa tgttctcaaa atattcttga
     3061 atgtactgtg atgtcaataa aactatttag ttcatttttg ttaaa
//
