LOCUS       XM_030254203            3397 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus PMS1 homolog2, mismatch repair system
            component (Pms2), transcript variant X32, mRNA.
ACCESSION   XM_030254203
VERSION     XM_030254203.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030254203.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..3397
                     /gene="Pms2"
                     /gene_synonym="Pmsl2"
                     /note="PMS1 homolog2, mismatch repair system component;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 47 ESTs, 371 long SRA reads, 1
                     Protein, and 99% coverage of the annotated genomic feature
                     by RNAseq alignments, including 27 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:18861"
                     /db_xref="MGI:MGI:104288"
     CDS             1069..2565
                     /gene="Pms2"
                     /gene_synonym="Pmsl2"
                     /codon_start=1
                     /product="mismatch repair endonuclease PMS2 isoform X14"
                     /protein_id="XP_030110063.1"
                     /db_xref="GeneID:18861"
                     /db_xref="MGI:MGI:104288"
                     /translation="MFDSDANKLNVNQQPLLDVEGNLVKLHTAELEKPVPGKQDNSPS
                     LKSTADEKRVASISRLREAFSLHPTKEIKSRGPETAELTRSFPSEKRGVLSSYPSDVI
                     SYRGLRGSQDKLVSPTDSPGDCMDREKIEKDSGLSSTSAGSEEGFSTPEVASSFSSDY
                     NVSSPEDRPSQETINCGDLDCRPPGTGQSLKPEDHGYQCKALPLARLSPTNAKRFKTE
                     ERPSNVNISQRLPGPQSTSAAEVDVAIKMNKRIVLLEFSLSSLAKRMKQLQHLKAQNK
                     HELSYRKFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLV
                     DQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVID
                     EDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRK
                     SVMIGTALNASEMKKLITHMGEMDHPWNCPHGRPTMRHVANLDVISQN"
ORIGIN      
        1 aggagacgcg tcttttcccg agagcggcag cgccaactct cccgcggtga ctgtgactgg
       61 aggagtcctg catccatgga gcaaaccgaa ggcgtgagaa tgtgctaagg ccatcaagcc
      121 tattgatggg aagtcagtcc atcaaatttg ttctgggcag gtggtactca gtttaagcac
      181 cgctgtgaag gagttgatag aaaatagtgt agatgctggt gctactacta ttgatctaag
      241 gcttaaagac tatggggtgg acctcattga agtttcagac aatggatgtg gggtagaaga
      301 agaaaacttt gaaggtctag ctctgaaaca tcacacatct aagattcaag agtttgccga
      361 cctcacgcag gttgaaactt ttggctttcg gggggaagct ctgagctctc tgtgtgcact
      421 aagtgatgtc actatatcta cctgccacgg gtctgcaagc gttgggactc gactggtgtt
      481 tgaccataat gggaaaatca cccagaaaac tccctacccc cgacctaaag gaaccacagt
      541 cagtgtgcag cacttatttt atacactacc cgtgcgttac aaagagtttc agaggaacat
      601 taaaaaggag tatgccaaaa tggtgcaggt cttacaggcg tactgtatca tctcagcagg
      661 cgtccgtgta agctgcacta atcagctcgg acaggggaag cggcagcctg tggtgtgcac
      721 aagcggcagc tctggcatga aggaaaatat cgggtctgtg tttggccaga agcagttgca
      781 aagcctcatt ccttttgttc agctgccccc tagtgacgct gtgtgtgaag agtacggcct
      841 gagcacttcc aggacgccac aaaacctttt ctacgtttcg ggcttcattt cacagtgcac
      901 gcacggcgcc gggaggagtg caacagacag gcagtttttc ttcatcaatc agaggccctg
      961 tgacccagca aagaatgtgt ggatattaat gtaactccag ataaaaggca aattctacta
     1021 caagaagaga agctattgct ggccgtttta aagacctcct tgataggaat gtttgacagt
     1081 gatgcaaaca agcttaatgt caaccagcag ccactgctag atgttgaagg taacttagta
     1141 aagctgcata ctgcagaact agaaaagcct gtgccaggaa agcaagataa ctctccttca
     1201 ctgaagagca cagcagacga gaaaagggta gcatccatct ccaggctgag agaggccttt
     1261 tctcttcatc ctactaaaga gatcaagtct aggggtccag agactgctga actgacacgg
     1321 agttttccaa gtgagaaaag gggcgtgtta tcctcttatc cttcagacgt catctcttac
     1381 agaggcctcc gtggctcgca ggacaaattg gtgagtccca cggacagccc tggtgactgt
     1441 atggacagag agaaaataga aaaagactca gggctcagca gcacctcagc tggctctgag
     1501 gaagggttca gcaccccaga agtggccagt agctttagca gtgactataa cgtgagctcc
     1561 ccagaagaca gaccttctca ggaaaccata aactgtggtg acttggactg ccgtcctcca
     1621 ggtacaggac agtccttgaa gccagaagac catggatatc aatgcaaagc tctacctcta
     1681 gctcgtctgt cacccacaaa tgccaagcgc ttcaagacag aggaaagacc ctcaaatgtc
     1741 aacatttctc aaagattgcc tggtcctcag agcacctcag cagctgaggt cgatgtagcc
     1801 ataaaaatga ataagagaat cgtgctcctc gagttctctc tgagttctct agctaagcga
     1861 atgaagcagt tacagcacct aaaggcgcag aacaaacatg aactgagtta cagaaaattt
     1921 agggccaaga tttgccctgg agaaaaccaa gcagcagaag atgaactcag aaaagagatt
     1981 agtaaatcga tgtttgcaga gatggagatc ttgggtcagt ttaacctggg atttatagta
     2041 accaaactga aagaggacct cttcctggtg gaccagcatg ctgcggatga gaagtacaac
     2101 tttgagatgc tgcagcagca cacggtgctc caggcgcaga ggctcatcac accccagact
     2161 ctgaacttaa ctgctgtcaa tgaagctgta ctgatagaaa atctggaaat attcagaaag
     2221 aatggctttg actttgtcat tgatgaggat gctccagtca ctgaaagggc taaattgatt
     2281 tccttaccaa ctagtaaaaa ctggaccttt ggaccccaag atatagatga actgatcttt
     2341 atgttaagtg acagccctgg ggtcatgtgc cggccctcac gagtcagaca gatgtttgct
     2401 tccagagcct gtcggaagtc agtgatgatt ggaacggcgc tcaatgcgag cgagatgaag
     2461 aagctcatca cccacatggg tgagatggac cacccctgga actgccccca cggcaggcca
     2521 accatgaggc acgttgccaa tctggatgtc atctctcaga actgacacac cccttgtagc
     2581 atagagttta ttacagattg ttcggtttgc aaagagaagg ttttaagtaa tctgattatc
     2641 gttgtacaaa aattagcatg ctgctttaat gtactggatc catttaaaag cagtgttaag
     2701 gcaggcatga tggagtgttc ctctagctca gctacttggg agatcccggt gggaggctca
     2761 tgtgagccca ggactttgag accactccga gccacattca tgagactcaa ttcaaggaca
     2821 aaaaaaaaaa agatattttt gaagcctttt taccatgtct gcagttactg ttctgcaatt
     2881 tgactttgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtggcaa
     2941 cttttgactt tgagccctca atggcgattg aattctattt gttttctcac ccacccaccc
     3001 tcaccccagt gtctgaggca gcgttttgtg aaactcaggc ttctcttgac tcgttttgtc
     3061 accaaggttg gcctagaact gagcttgcct ccacggccca agagctggga tcccaggtgt
     3121 gtgtcacata tgcccacatt aaaaaaatat ggtctttttt aattagcagc tctcaatccc
     3181 gactcatgaa atttaagaac aaaggacttc tttacctggt tggaaagaaa ttgctgacta
     3241 ggattgggat gcctttggag tgggtagaaa gggatgagac gggcttccag ccctggctga
     3301 tctggaactt gctatttaga gcaccccagc ttgaactcat attcccctgc ctctgcctcc
     3361 tgaattctag gattaaagtc acgagccacc acaccta
//
