LOCUS       NM_025928               1004 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus polyamine-modulated factor 1 (Pmf1), transcript
            variant 1, mRNA.
ACCESSION   NM_025928
VERSION     NM_025928.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Fededa,J.P., Esk,C., Mierzwa,B., Stanyte,R., Yuan,S., Zheng,H.,
            Ebnet,K., Yan,W., Knoblich,J.A. and Gerlich,D.W.
  TITLE     MicroRNA-34/449 controls mitotic spindle orientation during
            mammalian cortex development
  JOURNAL   EMBO J 35 (22), 2386-2398 (2016)
   PUBMED   27707753
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Varma,D. and Salmon,E.D.
  TITLE     The KMN protein network--chief conductors of the kinetochore
            orchestra
  JOURNAL   J Cell Sci 125 (Pt 24), 5927-5936 (2012)
   PUBMED   23418356
  REMARK    Review article
REFERENCE   3  (bases 1 to 1004)
  AUTHORS   Lampert,F. and Westermann,S.
  TITLE     A blueprint for kinetochores - new insights into the molecular
            mechanics of cell division
  JOURNAL   Nat Rev Mol Cell Biol 12 (7), 407-412 (2011)
   PUBMED   21633384
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1004)
  AUTHORS   Lopez-Garcia,C., Lopez-Contreras,A.J., Cremades,A., Castells,M.T.
            and Penafiel,R.
  TITLE     Transcriptomic analysis of polyamine-related genes and polyamine
            levels in placenta, yolk sac and fetus during the second half of
            mouse pregnancy
  JOURNAL   Placenta 30 (3), 241-249 (2009)
   PUBMED   19131104
REFERENCE   5  (bases 1 to 1004)
  AUTHORS   Lopez-Garcia,C., Lopez-Contreras,A.J., Cremades,A., Castells,M.T.,
            Marin,F., Schreiber,F. and Penafiel,R.
  TITLE     Molecular and morphological changes in placenta and embryo
            development associated with the inhibition of polyamine synthesis
            during midpregnancy in mice
  JOURNAL   Endocrinology 149 (10), 5012-5023 (2008)
   PUBMED   18583422
REFERENCE   6  (bases 1 to 1004)
  AUTHORS   Stephenson,A.H. and Seidel,E.R.
  TITLE     Analysis of the interactions of Nrf-2, PMF-1, and CSN-7 with the
            5'-flanking sequence of the mouse 4E-BP1 gene
  JOURNAL   Life Sci 79 (13), 1221-1227 (2006)
   PUBMED   16647090
  REMARK    GeneRIF: formation of the Nrf-2/PMF-1 complex is involved in
            transcriptional regulation of 4E-BP1
REFERENCE   7  (bases 1 to 1004)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   8  (bases 1 to 1004)
  AUTHORS   Wang,Y., Devereux,W., Woster,P.M. and Casero,R.A. Jr.
  TITLE     Cloning and characterization of the mouse polyamine-modulated
            factor-1 (mPMF-1) gene: an alternatively spliced homologue of the
            human transcription factor
  JOURNAL   Biochem J 359 (Pt 2), 387-392 (2001)
   PUBMED   11583586
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC102388.7.
            
            On Oct 6, 2022 this sequence version replaced NM_025928.4.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049223.1, AF348510.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-168               AC102388.7         80599-80766
            169-274             AC102388.7         91106-91211
            275-375             AC102388.7         91687-91787
            376-571             AC102388.7         94822-95017
            572-1004            AC102388.7         96352-96784
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 38.82 cM"
     gene            1..1004
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /note="polyamine-modulated factor 1"
                     /db_xref="GeneID:67037"
                     /db_xref="MGI:MGI:1914287"
     exon            1..168
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             17..625
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     PMF-1"
                     /codon_start=1
                     /product="polyamine-modulated factor 1 isoform 1"
                     /protein_id="NP_080204.1"
                     /db_xref="CCDS:CCDS38481.1"
                     /db_xref="GeneID:67037"
                     /db_xref="MGI:MGI:1914287"
                     /translation="MAEVSRDSEAAERGPEGSSPEAVPGDATIPRVKLLDAIVDTFLQ
                     KLVADRSYERFTTCYKHFHQLNPEVTQRIYDKFVAQLQTSIREEISEIKEEGNLEAVL
                     NSLDKIIEEGRERGEPAWRPSGIPEKDLCSVMAPYFLKQQDTLCHQVRKQEAKNQELA
                     DAVLAGRRQVEELQQQVRALQQTWQALHREQRELLSVLRAPE"
     exon            169..274
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            275..375
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            376..571
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            572..1004
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      979..984
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1004
                     /gene="Pmf1"
                     /gene_synonym="2600009M07Rik"
                     /note="major polyA site"
ORIGIN      
        1 gcggttcaat ttcaacatgg ctgaggtgag ccgagatagc gaggctgcgg aaagggggcc
       61 tgagggctcc tctccggaag ctgtgccagg ggacgcgacc atccccaggg tgaaactcct
      121 ggacgccata gtagacactt tcctccagaa gctagtcgcc gacaggagct acgagaggtt
      181 caccacctgc tacaaacact tccaccagtt gaaccctgag gtgacgcaga ggatctatga
      241 caagtttgtg gctcagttgc agacatccat ccgcgaggaa atctcagaaa tcaaagagga
      301 ggggaaccta gaagctgtcc tgaactccct ggataagatc atagaagaag gcagagagcg
      361 cggagagcca gcctggcgac ccagtggaat cccagagaaa gacctgtgta gtgtcatggc
      421 accctacttc ctgaagcaac aggataccct gtgtcatcaa gtacggaaac aggaagccaa
      481 gaaccaggaa ctggccgacg ctgtcctggc cgggcgcagg caggtggagg agctgcagca
      541 gcaggttcgg gccctccagc aaacatggca ggctctacac agagagcaga gggagctgct
      601 gtcagtgctg agggcgcctg agtgaacagc tgctgggctc agccctctag agcgcctgtg
      661 gaggcagttt ccaggcagta atggagtccc caccaccgct taggttctgc tggggtcaca
      721 ctgccttcag attcctgccg ccatcttctg cctgcaggat tgggactccc accctggcat
      781 cagacaccag gctttgtctt ctggagttgc agccagcgct gccccatgcc cttctgatcc
      841 tccccctctc ccaccgccct ccctggatag gatttgggca gggtttcagt ctccactgat
      901 tgccgccttg ttctccctga ctgattgctg ccttgctggc tagcccaagg gccctgccat
      961 gttctcccca catccgtaaa taaacttcct ttcccacact gtca
//
