LOCUS       NM_001195693            1414 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus phospholipid scramblase family, member 5 (Plscr5),
            mRNA.
ACCESSION   NM_001195693 XM_006510736 XM_287936
VERSION     NM_001195693.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1414)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC111125.11.
            
            On or before Feb 12, 2019 this sequence version replaced
            XM_006510736.2, NM_001195693.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.4577436.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164136, SAMN01164138
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-148               AC111125.11        136759-136906       c
            149-333             AC111125.11        131339-131523       c
            334-376             AC111125.11        126663-126705       c
            377-597             AC111125.11        125559-125779       c
            598-759             AC111125.11        124396-124557       c
            760-921             AC111125.11        122042-122203       c
            922-1004            AC111125.11        120257-120339       c
            1005-1414           AC111125.11        119765-120174       c
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 48.33 cM"
     gene            1..1414
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /note="phospholipid scramblase family, member 5"
                     /db_xref="GeneID:100504689"
                     /db_xref="MGI:MGI:3779462"
     exon            1..148
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /inference="alignment:Splign:2.1.0"
     CDS             136..960
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /codon_start=1
                     /product="phospholipid scramblase family member 5"
                     /protein_id="NP_001182622.1"
                     /db_xref="CCDS:CCDS57688.1"
                     /db_xref="GeneID:100504689"
                     /db_xref="MGI:MGI:3779462"
                     /translation="MASKDSQNQNPRSLPGFLPRATNPDQNSQEASSNPRKQARQQPG
                     VSQPSSFLPTATLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIY
                     FAVEESICFNRNVCSTLRACTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAP
                     PGTIVGYVAQKWGPFQPKFTIQNANKEDILKIIGPCTTCGCFGDVDFEVKTVDEKVTI
                     GKISKYWSGFVNDVFTNADNFGIHVPADLDVTLKAAMIGACFLFDFMFFEHSLAGL"
     exon            149..333
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /inference="alignment:Splign:2.1.0"
     exon            334..376
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /inference="alignment:Splign:2.1.0"
     exon            377..597
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /inference="alignment:Splign:2.1.0"
     exon            598..759
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /inference="alignment:Splign:2.1.0"
     exon            760..921
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /inference="alignment:Splign:2.1.0"
     exon            922..1004
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /inference="alignment:Splign:2.1.0"
     exon            1005..1414
                     /gene="Plscr5"
                     /gene_synonym="331000"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagtgtttc tgctgtctgc aagctgacat gaggcgggct gcaagcgaca ggagttttgt
       61 tcactctgct ctcttcgtgt tgaaacagga aaagcctttt cacctggctg cctttgaaga
      121 agtactcaga ctgccatggc ctcgaaagat tcccagaacc aaaaccctag aagtctgcct
      181 gggtttcttc ctcgagctac aaacccagat caaaactctc aggaggcttc ttccaatccc
      241 aggaaacagg caaggcagca gccgggtgtc tctcagccaa gcagtttcct gccaacagcc
      301 actctccctc ctggtctaga gtatttaagc cagctggacc tgataatcat ccatcagcag
      361 gtggaacttc ttgggatgat cctcggcact gagacctcca acaaatatga gatcaaaaac
      421 agcttgggac aaagaattta ctttgcggtg gaagaaagca tctgttttaa tcgtaatgtg
      481 tgttccacgc tgcgagcctg caccctgagg atcacagaca actcgggtcg agaggtgatt
      541 acagtgaaca ggcccctaag gtgtaacagc tgttggtgcc cctgctacct acaagagcta
      601 gaaatccaag cccctcctgg tactatagtt ggttatgttg cacagaagtg gggccctttt
      661 cagcccaaat tcacaattca aaatgcaaac aaagaagata ttttgaaaat cattggtccc
      721 tgcacaacct gtggctgttt tggcgatgtg gattttgagg tgaaaactgt tgatgagaag
      781 gttacaattg ggaagatctc caagtactgg tcgggatttg tcaatgacgt gttcacaaac
      841 gctgacaact ttgggatcca tgttccagca gatctcgacg tgacactcaa agcagcgatg
      901 attggtgctt gctttctctt tgattttatg ttctttgaac attcacttgc tggattataa
      961 caagctcgat gacgaaaaca ataaaatatg caaaacgcat ttcgatgtcc cttgggctct
     1021 gagttttatt tcaggatggt ctgagtattt gatttttgta taactaaatg tgaattatta
     1081 tatttattag aacactgttt aatgagacaa ttacctggtt ttgaatgcat ggtagctaaa
     1141 tacgcaatta ctagtgtgag tccaaggtta ctgtgagaga ttaccattct ctctttattc
     1201 ttttgaagtc actgcaatgg gaagcatgaa agatgagagc taaggcttgc agcatcactg
     1261 atgggaattc agtgtttaga gaacactttg aagtgttgct ggtactacgg gtggttgcta
     1321 atcaaaagac ttgaatttct aaaatatctt ttcaaatgta gctccttttg actttcttaa
     1381 ttttatttct tctttttaaa ttctcatgta ttct
//
