LOCUS       NM_028000               1486 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus phospholipid phosphatase 5 (Plpp5), transcript variant
            1, mRNA.
ACCESSION   NM_028000 XM_134059 XM_911883 XM_984494
VERSION     NM_028000.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1486)
  AUTHORS   Trezise,S., Karnowski,A., Fedele,P.L., Mithraprabhu,S., Liao,Y.,
            D'Costa,K., Kueh,A.J., Hardy,M.P., Owczarek,C.M., Herold,M.J.,
            Spencer,A., Shi,W., Willis,S.N., Nutt,S.L. and Corcoran,L.M.
  TITLE     Mining the Plasma Cell Transcriptome for Novel Cell Surface
            Proteins
  JOURNAL   Int J Mol Sci 19 (8), 2161 (2018)
   PUBMED   30042348
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1486)
  AUTHORS   Tzeng,J., Byun,J., Park,J.Y., Yamamoto,T., Schesing,K., Tian,B.,
            Sadoshima,J. and Oka,S.
  TITLE     An Ideal PPAR Response Element Bound to and Activated by PPARalpha
  JOURNAL   PLoS One 10 (8), e0134996 (2015)
   PUBMED   26241474
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1486)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AA184457.1, DV661598.1 and CO044265.1.
            
            On or before Feb 7, 2007 this sequence version replaced
            XM_134059.6, XM_911883.2, XM_984494.1.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK144593.1, SRR1660817.463021.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-412               AA184457.1         1-412
            413-1043            DV661598.1         63-693
            1044-1486           CO044265.1         1-443               c
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 14.17 cM"
     gene            1..1486
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /note="phospholipid phosphatase 5"
                     /db_xref="GeneID:71910"
                     /db_xref="MGI:MGI:1919160"
     exon            1..104
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            105..213
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            214..304
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            305..368
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            369..493
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            494..664
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            665..1472
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1439..1444
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /note="hexamer: AATAAA"
     polyA_site      1472
                     /gene="Plpp5"
                     /gene_synonym="1810019D05Rik; 2310022A04Rik; Ppapdc1;
                     Ppapdc1b"
                     /note="major polyA site"
ORIGIN      
        1 gcgccggggc cacgtcagcg tctgatccgc acgtatggcg ggatggggac ggcggccctg
       61 ggagccgagc tgggcgtgcg ggtcctgctc tttgtggctt tcctggtgac cgagctgctc
      121 cctcccttcc agcggcggat ccagcccgag gagctgtggc tctacaggaa cccgtacgtg
      181 gaggcggaat acttccccac cggccgcatg tttgtcattg cctttctcac tccactgtcc
      241 ctgatcttcc tcgccaagtt tctaaggaaa gctgacgcta ccgacagcaa gcaagcctgc
      301 ctcgctgcca gccttgccct agctctgaat ggtgtcttta ccaacataat caaactgata
      361 gtgggcaggc cccgcccaga cttcttctac cgctgcttcc ctgatgggct ggcccattct
      421 gatctgacgt gcacggggga cgaggatgtg gtgaacgagg gccgaaagag cttccccagt
      481 ggacattctt cctttgcatt tgctggtctg gcctttgctt ccttctacct ggcagggaag
      541 ttacactgct tcacgccaca aggccgaggg aagtcctgga ggctctgtgc ctttctgtca
      601 cctttactct ttgcagccgt gattgcactg tcccgcacgt gtgactacaa gcaccactgg
      661 caagatgtgc tagttggctc catgattgga atgacatttg cctatgtctg ctacaggcag
      721 tactaccccc ctctgactga cgtagagtgc cataaaccat ttcaggacaa gcacaaactt
      781 ccgtcctcac agaagcccag tgagttgcac catttggaaa tttagctgaa tctacctcag
      841 tggagaacaa gcagatcaac cctcctaact ggacaggacg cacaagccaa ggatttctgg
      901 cttgacctct tcagggtcta agtgaggaca cagccacact gtacttgcct ccgcaaggct
      961 gtgcacttta ccccacttcc aaggctagcc cctgaggtct cagtgcttgg cctggcacgg
     1021 ctctgtcagg acttctctca ctaggttaat ccataggatt gctattctaa gacctagtgt
     1081 ctacagtgat taaatgtcac tccagaggaa acctttccac aaaggaagct ttcatgaccc
     1141 catttaccga acataatccc tgtcctttat aaataagggc agtgccagct aaactctgat
     1201 tcggcttgct ttttgtggta acattccatt aagccttaaa taataaaaca ttcaattttg
     1261 gccaattttt tactttttac tacattagga aagaaaaatt agggatatta tctagaaaat
     1321 aaatgcaaca ctttctgcct ttgttcataa agaaataaat ggcgcaacta gaggctatca
     1381 ccagaacttg gtatggagga ccaactgata gctaccattt tattgttatt atactttaaa
     1441 taaaagtctc tcttatgtat ttcttcctat aaaaaaaaaa aaaaaa
//
