LOCUS       XM_017314926             911 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus phospholipase D family member 4 (Pld4),
            transcript variant X1, mRNA.
ACCESSION   XM_017314926
VERSION     XM_017314926.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017314926.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..911
                     /gene="Pld4"
                     /gene_synonym="thss"
                     /note="phospholipase D family member 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 ESTs, 29 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     27 samples with support for all annotated introns"
                     /db_xref="GeneID:104759"
                     /db_xref="MGI:MGI:2144765"
     CDS             97..876
                     /gene="Pld4"
                     /gene_synonym="thss"
                     /codon_start=1
                     /product="5'-3' exonuclease PLD4 isoform X1"
                     /protein_id="XP_017170415.1"
                     /db_xref="GeneID:104759"
                     /db_xref="MGI:MGI:2144765"
                     /translation="MDKKKEHPEMRIPLQTAVEVSDWPCSTSHDPHSGLGMVLGMLAV
                     LGLSSVTLILFLWQGATSFTSHRMFPEEVPSWSWETLKGDAEQQNNSCQLILVESIPE
                     DLPFAAGSPTAQPLAQAWLQLLDTARESVHIASYYWSLTGLDIGVNDSSSRQGEALLQ
                     KFQQLLLRNISVVVATHSPTLAKTSTDLQVLAAHGAQIRQVPMKQLTGGVLHSKFWVV
                     DGRHIYVGSANMDWRSLTQPILVSKPRVPVRDLASKTQDGG"
ORIGIN      
        1 aaagaggaag tgaatggaag ggggaagcag caggccagag aggaggcagg tgcctgcctg
       61 cacaggcaaa gcctgcagac agtggctgga accaggatgg acaagaagaa agagcaccca
      121 gagatgcgga taccactcca gacagcagtg gaggtctctg attggccctg ctccacatct
      181 catgatccac atagcggact tggcatggta ctggggatgc tagctgtact gggactcagc
      241 tctgtgactc tcatcttgtt cctgtggcaa ggggccactt ctttcaccag tcatcggatg
      301 ttccctgagg aagtgccctc ctggtcctgg gagaccctga aaggagacgc tgagcagcag
      361 aataactcct gtcagctcat ccttgtggaa agcatccctg aggacttgcc atttgcagct
      421 ggcagcccca ctgcccagcc cctggcccag gcttggctgc agcttcttga cactgctcgg
      481 gagagcgtcc acattgcctc gtactactgg tccctcactg gactggacat tggagtcaat
      541 gactcgtctt ctcggcaggg agaggccctt ctacagaagt tccaacagct tcttctcagg
      601 aacatctctg tggtggtggc cacccacagc ccaacattgg ccaagacatc cactgacctc
      661 caggtcttgg ctgcccatgg tgcccagata cgacaagtgc ccatgaaaca gcttactggg
      721 ggtgttctac actccaaatt ctgggttgtg gatgggcgac acatctacgt gggcagtgcc
      781 aacatggact ggcggtccct gactcagcct atcctagtca gcaagccccg ggtcccagtg
      841 agagatcttg cctcaaaaac acaagatgga ggctgaagag atggctcatc ggttaagagt
      901 actgtctgat c
//
