LOCUS       NM_207279               3658 bp    mRNA    linear   ROD 27-JUL-2024
DEFINITION  Mus musculus phosphatidylinositol-specific phospholipase C, X
            domain containing 1 (Plcxd1), transcript variant 1, mRNA.
ACCESSION   NM_207279 XM_149643
VERSION     NM_207279.3
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3658)
  AUTHORS   Goldsworthy,M., Absalom,N.L., Schroter,D., Matthews,H.C.,
            Bogani,D., Moir,L., Long,A., Church,C., Hugill,A., Anstee,Q.M.,
            Goldin,R., Thursz,M., Hollfelder,F. and Cox,R.D.
  TITLE     Mutations in Mll2, an H3K4 methyltransferase, result in insulin
            resistance and impaired glucose tolerance in mice
  JOURNAL   PLoS One 8 (6), e61870 (2013)
   PUBMED   23826075
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC166747.4.
            
            On Jun 22, 2022 this sequence version replaced NM_207279.2.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longest isoform (1).
            
            CCDS Note: The coding region has been updated to extend the
            N-terminus. The use of an alternative upstream start codon would
            result in a protein that is 12 aa longer at the N-terminal.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC039627.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-225               AC166747.4         156958-157182
            226-403             AC166747.4         157311-157488
            404-493             AC166747.4         158179-158268
            494-630             AC166747.4         158551-158687
            631-759             AC166747.4         158963-159091
            760-915             AC166747.4         159339-159494
            916-1099            AC166747.4         159609-159792
            1100-3658           AC166747.4         160558-163116
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 53.3 cM"
     gene            1..3658
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /note="phosphatidylinositol-specific phospholipase C, X
                     domain containing 1"
                     /db_xref="GeneID:403178"
                     /db_xref="MGI:MGI:2685422"
     exon            1..225
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /inference="alignment:Splign:2.1.0"
     exon            226..403
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /inference="alignment:Splign:2.1.0"
     exon            404..493
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /inference="alignment:Splign:2.1.0"
     exon            494..630
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /inference="alignment:Splign:2.1.0"
     exon            631..759
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /inference="alignment:Splign:2.1.0"
     exon            760..915
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /inference="alignment:Splign:2.1.0"
     exon            916..1099
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /inference="alignment:Splign:2.1.0"
     exon            1100..3658
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1516
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /note="major polyA site"
     regulatory      3633..3638
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
                     /note="hexamer: AGTAAA"
     polyA_site      3658
                     /gene="Plcxd1"
                     /gene_synonym="A330045H12Rik; Gm576"
ORIGIN      
        1 gtagatgcct ggcagtttgg ctctggagcc agggcagagg aatgcagggc ctgtaagggc
       61 ttgaccctgg aagggaagac ccatcacaga gcctttggga acagcagctc cttgtggtag
      121 gttagaagag aggttgaacc cttattaaaa gtagatttca aaaaaggtta tgcctacaca
      181 cgcatgactt aactgcgctg gcagtggagt ctgatctggt gcttgatgct agcctgcccg
      241 gcctgccagg attatggctg aagaatgagc cagtcagagt tggtccccac cccaccccta
      301 atgcagggac tagagccgag cagggtagga agagtgggtg aagtctgccg ctcagtgcat
      361 aagaacgtgt tgaccgtccc agagcacaca gtaggcaccg aagctgcagc tcccatggga
      421 gaccaggcag actggatgtc gcagctgtgc cctcagctgt gggatgtccc cctgcaccac
      481 ctgtccatcc cagggagcca cgacacgatg acatactgcc tgaaccgtaa gtctcggatc
      541 tcccgtgcaa gttcgtggct actgcacctg ttgggccggg tcgtgccatt catcaccggg
      601 cccgtggtga tgaaatggtc ggtcacacag accctggacg tgacgcagca gctggatgcg
      661 ggagtgcggt acctggacct gcggatcgcg catgcgccgg agggctctac acggaaccta
      721 tgcttcgtgc acatgatgta cacgaaggcg ctggtggagg acaccctcac tgagatagct
      781 gagtggctgc aatcacaccc ccgcgaggtg gtcatcttgg cttgcaggaa cttcgagggg
      841 atgacttgtg agttgcacga ctatctcgcg ggctgcatcg tgaacatttt tggagacatg
      901 ctgtgtccca gtggggaagt ccccacactg aggcagctat gggcacgaga gcagcaggtc
      961 atcgtgtcct acgaggatga ggccacagtc agccgttatg atcagctgtg gcctgcgatc
     1021 ccatattggt ggggaaatgc agtgaagaca gatgtgctgc tgcggttcct ggagaccatg
     1081 aagggccaag gccgcccaga tggtctgttc gttgctggga tcaacatcac tgagaacctg
     1141 tgctacatcc tcctgcaccc agtggactcc ctggaggaga tgacacgtcg cagcctcccc
     1201 ctcatgaccg agtgggtgtg tgcacagcag ccggggcaga gccctcaatg caccaacatc
     1261 atcgcaggcg acttcgtgga tgcggatggc ttcgtgagta aggtcatcag cctgaattgc
     1321 aaactgctgt ctccctaact gccacatccc caagacgggg gtcaccactt cggagacctt
     1381 cagacccagc aggccagggc ccagaatgtt ctgctgtcat gatgctgttg cagaacacat
     1441 ggtggccacg tatgtgtcac ttctgttcgc atcaccaggt gctcaggcct ccattgatga
     1501 acggattttg aactaacgca catgtgcgga tgtttttgtg gtctctggca gcccaggcta
     1561 gacccaggcc ttggaaacag tctctgctcc caagggaagc tccaccccag ctactgagta
     1621 caagcaccat ttcccttgta acagggactc ttcccagtca cctatacaaa accaggccgg
     1681 tgagggagac acaggacata tcctgcttta ataagttact gtcagtcaat gtgggagggc
     1741 agaaggggcg tcaatgggga acagtttcct gaaccggcca taggcagcct gggtgatgac
     1801 gacggtcacg tgggccgcat caccctctgg cagctcctgc acctgctgca ccaccgcctc
     1861 cttatagagc cagctgcagg gacacacaaa aatcaccacc aggcatgctg ggaggtctca
     1921 gggcgtgctg agagatggta caggcacggg tgggcacccc cacacgactc acccaagttg
     1981 gggtccccca aggcgcacac atagcgtgag gacctgcctg cctgtggcac gcagcactga
     2041 cgcctccagt gcggccttca gctcgtctag cccacgccct gagattgcag acacggccag
     2101 ggctccagag catggtggag tgtacctgca ggggcggggg acttaggtga tctcatgtgg
     2161 ggttggccgg gagggcggtg tgggccacca ccctgcccat cgtaccacac tcaccccggc
     2221 accaggtcca ccttgctgtg aacctccaac gctgactcca acagtgcggg aggcagatgc
     2281 aggccccgca atgtggacag gacagtggcc ttctgcagct ctgcatcagg gtggctcaca
     2341 tcagtcacgt gcaccaggac atcctgtatg gggcgtggtt ggggatagga gcaagatcag
     2401 gcatcatgaa ggggtgtggt cagaggtggg agatgaggag tgtggtctag gggtgtggcc
     2461 agaggacaga agcagtctgc agacagaaac tgccggggta tcatgtcaca cccaggccta
     2521 caaggagagt gacctgacac ccacagagga ccgcacagag gacaggctcc aaccgtcagg
     2581 tccctgaaac ccaccgagta agccacgtcc tccagtgtgg cagagaacgc atggatcagg
     2641 ctgtgcggca gctgggacag gaagccaata gtgtccacgt acaagatgcg caggcgtgag
     2701 gggagcaacc ccgcgtgtac ggtgacatca agagtagcaa acggttggtc ccgcggctgc
     2761 aaagcagcct cacccgtcag agcctggatg agtgtggtct tccctgggag ggagcaggtg
     2821 agaacgtggc actgtcagcc ccagctcttg ccatgcctac actggtgcac cccggcctcc
     2881 catgagggcc cctccctcct caccacagtt ggtgtatccc accactgaca ccacagggaa
     2941 ctctcgccgc acccgctcct tccgcatcag cctccgctta tcccgaagcc gctcaaggac
     3001 acgacggagc cgcagctccc ggtccctgag tgcgcgggcc cgcagctccg tgggtgactc
     3061 tcctgggagg acaagagaca cagtatgggg gcaggggaag gagaactgtg gcccggtgca
     3121 gaacttcagg gtcttctgtg ggcatgaaca tcacattctt gggggaatcc cgcctgacct
     3181 tgccccagac aggcaacgca tgagcagatc ctcccatggg ggatcacacc agtcattcac
     3241 agaaagacat agtcagccgg cctgtcacac atccatgaag cagttgggct ctgagcagat
     3301 tcttgtgtag gtcaatgtat agcatcccca gccttgagca ggctgactca gacctgttat
     3361 tctgacactg tggatgagac cacctacggt ggagtcttcc agacctagat aggtctattc
     3421 tgtcacctgt gctgctcttc tccaagatgc caataaccca aaaggctgaa cctgtcttcc
     3481 tgagatattc ctgggatagc tgacaatctg tcgaattggc gacctaatgc tagcagctct
     3541 agcagactaa gtgctaacaa cttggcaaca aagcatcaag aagtctgggt ggcagggaaa
     3601 tgggctttcc ccctttataa gcacagactc ttagtaaaca ttgggccatg atcagaaa
//
