LOCUS       XM_006538936            5771 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus phospholipase C, eta 2 (Plch2), transcript
            variant X2, mRNA.
ACCESSION   XM_006538936
VERSION     XM_006538936.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Feb 9, 2015 this sequence version replaced XM_006538936.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5771
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..5771
                     /gene="Plch2"
                     /gene_synonym="A930027K05Rik; Plc-eta2; PLCeta2; Plcl4"
                     /note="phospholipase C, eta 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 23 ESTs, 132 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:269615"
                     /db_xref="MGI:MGI:2443078"
     CDS             16..5235
                     /gene="Plch2"
                     /gene_synonym="A930027K05Rik; Plc-eta2; PLCeta2; Plcl4"
                     /codon_start=1
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase eta-2 isoform X2"
                     /protein_id="XP_006538999.1"
                     /db_xref="GeneID:269615"
                     /db_xref="MGI:MGI:2443078"
                     /translation="MTSRSALCFGCVEQPRDVGSALGPAPSWSEAPATQRRGGRLRVH
                     LCRKSTLVAADAGRVLAPLSSRLPVSARCACPRFHVAPRSTRSAAEGPPAPSQRGAGR
                     GCGAGGTSDSALLARRLHGAQCHSAERAARTVRRGPPALAKRCPRNLSLSQSQATDHP
                     SPRPRGHLAAVNAETMDAGAAPQKHMERCMSAMQEGTQMVKLRGSSKGLVRFYYLDEH
                     RSCLRWRPSRKNEKAKISIDSIQEVSEGRQSEIFQRYPDSSFDPNCCFSIYHGSHRES
                     LDLVSPSSEEARTWVTGLRYLMAGISDEDSLARRQRTRDQWLKQTFDEADKNGDGSLS
                     ISEVLQLLHKLNVNLPRQRVKQMFREADTDDHQGTLGFEEFCAFYKMMSTRRDLYLLM
                     LTYSNHKDHLDASDLQRFLEVEQKMNGVTLESCQNIIEQFEPCLENKSKGMLGIDGFT
                     NYTRSPAGDIFNPEHNRVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQ
                     AGCRCVEVDCWDGPDGEPIVHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENH
                     CSVVQQKKMAQYLTDILGDKLDLSSVSSEDATMLPSPQMLKGKILVKGKKLPANISED
                     AEEGEVSDEDSADEMEDDCKLLNGDASTNRKRVENIAKKKLDSLIKESKIRDCEDPND
                     FSVSTLSPSGKLGRKAEAKKGQSKVEEDVEAGEDSGVSRQNSRLFMSSFSKRKKKGSK
                     IKKVASVEEGDETLDSPGSQSRGTARQKKTMKLSRALSDLVKYTKSVGTHDVEIEVVS
                     SWQVSSFSETKAHQILQQKPTQYLRFNQHQLSRIYPSSYRVDSSNYNPQPFWNAGCQM
                     VALNYQSEGRMLQLNRAKFSANGDCGYVLKPQCMCQGVFNPNSEDPLPGQLKKQLALR
                     IISGQQLPKPRDSVLGDRGEIIDPFVEVEVIGLPVDCSKEQTRVVDDNGFNPMWEETL
                     VFTVHMPEIALVRFLVWDHDPIGRDFIGQRTLAFSSIMPGYRHVYLEGMEEASIFVHV
                     AVSDISGKVKQTLGLKGLFLRGTKPGSLDSHAAGQPLPRPSVSQRLLRRTASAPTKSQ
                     KPSRKGFPELALGTQDAGSEGAADDVAPSSPNPALEAPTQERSGSSSPRGKAPGGEAT
                     EERTLAQVRSPNAPEGPGPAGMAATCMKCVVGSCAGMDVEGLQREQQPSPGPAGSHMA
                     ISHQPRARVDSLGGPCCSPSPRATPGRSKEAPKGPRARRQGPGGGSVSSDSSSPDSPG
                     SPKVAPCQPEGAHRQQGALQGEMNALFVQKLEEIRSHSPMFSTDTRLFPLQRPISPLC
                     SLEPIAEEPALGPGLPLQAAAPTGPSQEGSQCPVGLGAKVTSSQQTSLGAFGTLQLRI
                     GGGRENEEPPLRPHNGGISSGPREGTSGRQTDSKSRSRVPGHLPVVRRAKSEGQVLSE
                     LSPTPAVYSDATGTDRLWQRLEPGSHRDSVSSSSSMSSNDTVIDLSLPSLGLCRSRES
                     IPGVSLGRLTSRPCLASAARPDLPPVTKSKSNPNLRVAGGLPTAPDELQPRPLAPRLT
                     GHHPRPPWHHLTLVGLRDCPVSAKSKSLGDLTADDFAPSFQGSTSSLSCGLGSLGVAH
                     QVLEPGIRRDALTEQLRWLTGFQQAGDITSPTSLGPAGDGSVGGPSFLRRSSSRSQSR
                     VRAIASRARQAQERQQRLRGQDSRGPPEEERGTPEGACSVGHEGCVDVPMPAKGAPEQ
                     VCGAADGQLLLRL"
ORIGIN      
        1 tgggggcgaa gagcaatgac ctcccgctca gctctttgct ttggctgcgt ggagcagcct
       61 cgagatgtgg gaagtgctct cggccccgcc ccctcctggt ccgaggctcc ggccacgcag
      121 aggcgagggg ggaggctgcg ggtgcatctt tgcagaaaga gtactttggt tgcggcggac
      181 gcggggcggg tgctggcccc gctgtcctct cggctcccag tctctgcgcg ttgcgcttgc
      241 ccgcggttcc acgtcgcgcc ccgctctacg cgcagcgcag ccgagggccc cccggccccc
      301 tcccagcgcg gggcgggcag ggggtgtggt gcgggcggca cgagtgacag cgcgctcctc
      361 gcgcggcgcc tccacggggc tcagtgtcac agcgccgaac gcgctgcgcg cacagtccgc
      421 cgcgggccgc cagccctggc gaagcgatgt cctcggaacc ttagcctcag tcagagccag
      481 gccactgacc acccgagtcc gcgccctcgt ggccacctcg ctgctgtcaa cgcggagaca
      541 atggacgcgg gagccgcccc gcagaagcac atggagcgat gcatgagtgc catgcaagag
      601 gggacccaga tggtgaagct ccgtggcagc tccaagggat tggtccgctt ctactacctg
      661 gatgagcacc gctcctgcct ccgatggcgt ccctcccgca agaacgagaa agccaagatt
      721 tccatcgact ccatccagga ggtgagtgag ggccggcagt ctgaaatctt ccagcgctac
      781 ccggacagca gctttgaccc caactgctgc ttcagcatct accatggcag ccacagagag
      841 tcgctggact tggtctcacc cagcagtgaa gaggcacgta cctgggtcac cggccttcgc
      901 tacctcatgg ctggcatcag cgatgaagac agcctagccc gtcgccagcg taccagggac
      961 cagtggctga agcagacgtt tgatgaggct gacaagaacg gggacggcag cctgagcatc
     1021 agtgaggttc tgcagctgct acataaactc aacgtgaacc tgccccggca gagggtgaaa
     1081 cagatgttca gggaggcgga cacagatgac catcagggga cattaggctt tgaggaattc
     1141 tgcgccttct acaagatgat gtctacccgc cgagacctct acctgctcat gctgacctac
     1201 agcaaccata aggaccactt ggatgcctcc gacctgcagc gctttctgga ggtggagcag
     1261 aagatgaacg gtgtgaccct ggagagctgt cagaacatca ttgagcagtt tgagccttgc
     1321 ctggaaaata agagcaaggg gatgctgggg attgatggct ttaccaacta cacccggagc
     1381 cccgccggtg acatcttcaa ccctgagcac aacagagtgc accaagacat gacgcagccg
     1441 ctgagtcact acttcatcac ctcgtcccac aacacctacc tcgtgggtga ccagctcatg
     1501 tcccagtctc gggtggacat gtatgcctgg gtcctgcagg ccggctgccg ctgtgtggag
     1561 gtggactgct gggacgggcc cgatggagaa cccattgtcc atcatggcta cactctgacc
     1621 tccaagatcc ttttcaaaga tgtcatcgaa accatcaaca aatacgcctt catcaagaat
     1681 gagtacccag tgatcctgtc cattgagaac cactgtagtg ttgttcagca gaagaagatg
     1741 gcccagtatc tgactgacat cctcggggac aagctggacc tctcctcagt gagcagcgaa
     1801 gatgccacca tgcttccatc tccacagatg ctcaagggca agatcctggt gaaggggaag
     1861 aagctccctg ccaatatcag tgaggatgca gaagaaggcg aagtatctga tgaggacagt
     1921 gctgatgaga tggaggatga ctgcaagctc ctcaatgggg atgcctccac caatcggaag
     1981 cgtgtggaaa acattgcaaa gaagaagctg gattctctga tcaaggagtc aaagatccgt
     2041 gactgtgaag accccaatga cttctctgtg tccacactat ccccctctgg aaagcttggg
     2101 cgcaaagcag aggccaagaa gggtcagagc aaggttgagg aagacgtgga ggccggggaa
     2161 gacagcgggg tgagcaggca gaatagccgc ctcttcatga gcagcttctc caagcgcaag
     2221 aaaaaaggca gcaagataaa gaaggtggcc agcgtggaag agggggacga gaccctggac
     2281 tccccaggaa gccagagccg agggactgcc cggcaaaaga agaccatgaa gctgtcacga
     2341 gccctctcgg acctagtgaa atataccaag tctgtgggga cccatgacgt ggagatagag
     2401 gtggtatcta gctggcaggt gtcgtccttc agtgagacca aggcccatca gatcctgcag
     2461 cagaagccca cccagtacct gcgcttcaac cagcaccagc tctcgcgcat atacccctcc
     2521 tcctaccgtg tggactccag caactacaat ccacaaccct tctggaacgc tggttgccag
     2581 atggttgccc tgaactacca gtcagagggg cggatgctac agctgaacag ggccaagttc
     2641 agcgccaacg gtgactgtgg ctacgtgctc aaaccccagt gcatgtgcca gggtgtcttc
     2701 aaccccaact cggaggatcc cctgccgggg cagctcaaga agcagctggc cctgaggatc
     2761 atcagtggcc agcagctgcc caaaccacgg gactcggtgc tgggcgaccg tggggagatc
     2821 atcgacccct tcgtggaggt ggaggtcatt gggctccccg tggactgcag caaggagcag
     2881 acccgagtgg tggacgacaa cggattcaac cccatgtggg aggagacact ggtgttcacc
     2941 gtgcacatgc cagagattgc gcttgtacgc ttcctggtct gggaccatga ccccattgga
     3001 cgtgacttca tcggccagag gacactagcc ttcagcagca taatgccagg ctaccggcat
     3061 gtgtacctag aagggatgga agaggcctct atctttgttc atgtggctgt cagtgacatt
     3121 agtggtaagg tcaagcagac tctgggtcta aaaggtctct tcctccgagg cacaaagcca
     3181 ggctcgctgg acagtcatgc tgctggacag cccctccccc ggccctccgt tagccagagg
     3241 ctcctgcggc gcacggccag tgccccgacc aaaagccaga agccaagtcg caagggcttc
     3301 ccagagctgg ccctgggcac acaggacgca ggctccgagg gggcagctga tgacgtggca
     3361 ccctctagcc ccaacccagc tctggaggcc cctactcaag agaggtcagg cagcagcagc
     3421 ccccgaggta aggcaccagg aggagaagca acagaagaga ggacactggc acaggtgcgg
     3481 tccccaaatg cccccgaagg ccctggacct gcagggatgg ccgccacatg catgaagtgt
     3541 gtggtgggct cctgcgccgg tatggacgtt gagggccttc aaagggagca acaacccagc
     3601 cctgggcctg caggcagcca catggccatc agccatcagc ccagggcccg ggtagattca
     3661 ctggggggcc cttgctgcag cccaagtcct cgagccaccc cagggagaag caaagaggcc
     3721 cccaagggtc ctagggctcg gcgccagggt ccaggcggcg gctctgtgtc ctcggactcc
     3781 agcagcccag acagcccagg cagccccaag gtggccccct gccagccgga gggtgctcac
     3841 aggcagcagg gggcgctgca gggagagatg aacgccttgt tcgttcaaaa gctggaggag
     3901 atcaggagtc attcccccat gttctccacc gatactcgcc tcttccccct gcagcggccc
     3961 atctcccccc tgtgcagcct ggaacccatt gccgaggaac cagccctggg ccctggcctc
     4021 ccgttacagg cagctgcccc cacaggtcca tctcaggaag ggtcccagtg ccctgtaggc
     4081 ctgggagcca aagtgaccag ctcccagcag acatctctgg gagcttttgg aaccctccag
     4141 ctcaggattg ggggcggtag ggaaaacgaa gagccacccc tcaggccaca caatggtggg
     4201 atctccagcg ggccacgtga ggggacttct ggaagacaga cagacagcaa gagccgctcc
     4261 cgggtcccgg gccacttgcc agtggttagg agggccaaga gtgagggcca ggtgctctcg
     4321 gagctctctc ccacacctgc agtgtactcg gatgccacgg gcactgacag gttatggcag
     4381 cggctggagc ctgggagcca cagggacagt gtctcctcat cctccagcat gtcctccaac
     4441 gacaccgtca tagacctatc actgcccagc ctcggcctct gccgcagccg agagagcatt
     4501 ccaggggtct ctcttggacg cctaacctca cggccctgct tagcctcagc tgcccgtcct
     4561 gacctgcctc ctgtgaccaa gagcaaatcg aaccccaacc tgcgggttgc gggtgggctg
     4621 cctactgcac ccgacgagct gcagccccgg cctcttgccc cgcggctgac cggccaccat
     4681 ccacggccac cgtggcatca cctcaccctg gtgggcctgc gggactgccc agtgtctgct
     4741 aagtccaaga gtctgggaga cctgacagct gacgactttg ctcccagctt tcagggcagc
     4801 accagcagcc tgagctgcgg cctaggctcc ctgggtgtgg cgcatcaggt gctggagccg
     4861 ggaatacggc gagatgctct cacggagcag ctacgctggc tcaccggctt ccagcaggct
     4921 ggggacatca cgtcgcccac cagcttgggc ccagctgggg acgggtctgt agggggcccc
     4981 agcttcctga ggcgttcctc ctctcggagc cagagccgcg tgcgcgctat tgccagccga
     5041 gcccgccaag cgcaggagcg ccagcagagg ctgagaggcc aggactcacg gggtccccca
     5101 gaggaggagc ggggcacccc tgagggtgcc tgttctgtag gccatgaggg ctgtgtggat
     5161 gtgccaatgc ctgccaaggg agcccctgag caggtgtgtg gtgctgctga tggccagctg
     5221 ctgctcaggc tctgaccctg cctgatgatt ccaactctgt accttccctg agactgcctg
     5281 caggggggag ggggtggggg ctggcctcaa cccgaccttt gctcaggaaa tgaagccact
     5341 gggtccccaa agctgttacg cccattcttc tgtctgtgga agacccagta gcctcccctt
     5401 caaccttagc tgtcctcttg tctctgatct tgggaagcaa gaaacagcat tgtccacctg
     5461 tccttctggg tggttcccac gttttaagat acataaatag atatttaact ttttagaacc
     5521 aaaacttaca gtcaaatggc tctgcgtcct tccccactgg tctgcctggt gtctggccct
     5581 gtggtgtgtg ctgagtgttt tcttctacct gctgtgtgct tgtatcccgg aatgcctgtg
     5641 acacacccac aactgctagg atgtttgtcc ctgtccccta ctccactgtg caccgggctt
     5701 gttttgaaca aaccacacag caattgtgta aatttgggaa cacaactcca ataaacgcat
     5761 caggcctgtt c
//
