LOCUS       NM_025806               1974 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus phospholipase B domain containing 1 (Plbd1), mRNA.
ACCESSION   NM_025806 XM_905366 XM_919322 XM_919337
VERSION     NM_025806.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1974)
  AUTHORS   Adissu,H.A., Estabel,J., Sunter,D., Tuck,E., Hooks,Y.,
            Carragher,D.M., Clarke,K., Karp,N.A., Newbigging,S., Jones,N.,
            Morikawa,L., White,J.K. and McKerlie,C.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Histopathology reveals correlative and unique phenotypes in a
            high-throughput mouse phenotyping screen
  JOURNAL   Dis Model Mech 7 (5), 515-524 (2014)
   PUBMED   24652767
REFERENCE   4  (bases 1 to 1974)
  AUTHORS   Thiagarajan,R.D., Georgas,K.M., Rumballe,B.A., Lesieur,E.,
            Chiu,H.S., Taylor,D., Tang,D.T., Grimmond,S.M. and Little,M.H.
  TITLE     Identification of anchor genes during kidney development defines
            ontological relationships, molecular subcompartments and regulatory
            pathways
  JOURNAL   PLoS One 6 (2), e17286 (2011)
   PUBMED   21386911
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC134474.4 and AK003169.1.
            
            On Dec 18, 2009 this sequence version replaced NM_025806.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK003169.1, BC019793.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               AC134474.4         74323-74436
            115-1974            AK003169.1         37-1896
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 66.59 cM"
     gene            1..1974
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /note="phospholipase B domain containing 1"
                     /db_xref="GeneID:66857"
                     /db_xref="MGI:MGI:1914107"
     exon            1..332
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             215..1867
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /note="putative phospholipase B-like 1; LAMA-like protein
                     1; lamina ancestor homolog 1; phospholipase B
                     domain-containing protein 1"
                     /codon_start=1
                     /product="phospholipase B-like 1 precursor"
                     /protein_id="NP_080082.1"
                     /db_xref="CCDS:CCDS20652.1"
                     /db_xref="GeneID:66857"
                     /db_xref="MGI:MGI:1914107"
                     /translation="MCHRSPGRSLRPPSPLLLLLPLLLQPPWAAGAASQSDPTGVHCA
                     TAYWSPESKKVEIKTVLDKNGDAYGYYNDSIKTTGWGILEIRAGYGSQVLSNEIIMFL
                     AGYLEGYLTALHMYDHFTNLYPQLFKNPSIVKKVQDFMEKQEMWTRQNIKAQKDDPFW
                     RHTGYVVTQLDGLYLGAQKRASEEKIKPMTMFQIQFLNAVGDLLDLIPSLSPTKSSSM
                     MKFKIWEMGHCSALIKVLPGFENIYFAHSSWYTYAAMLRIYKHWDFNIKDKYTLSKRL
                     SFSSYPGFLESLDDFYILSSGLILLQTTNSVYNKTLLKQVVPKTLLAWQRVRVANMMA
                     EGGKEWAQIFSKHNSGTYNNQYMVLDLKKVTINRSLDKGTLYIVEQIPTYVEYSDQTN
                     VLRKGYWASYNIPFHKTIYNWSGYPLLVHKLGLDYSYDLAPRAKIFRRDQGNVTDMAS
                     MKYIMRYNNYKEDPYSKGDPCSTICCREDLNGASPSPGGCYDTKVADIFLASQYKAYA
                     ISGPTVQDGLPPFNWNRFNDTLHRGMPEVFDFNFVTMKPILS"
     exon            333..552
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            553..636
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            637..775
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            776..916
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            917..1061
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1062..1262
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1263..1403
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1404..1589
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1590..1696
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1697..1974
                     /gene="Plbd1"
                     /gene_synonym="1100001H23Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcctagcctg gggctcagca gggcgaaggt tggttcccaa ggccacgtga agcgcccaag
       61 caggcaagac taatgtcaga agaaagttaa gatcggcccg gcctctgcaa cgcagcgccc
      121 tgctaccatc ctcaagtgcg gctcttgcaa cagctgccac cgccggcgcc agcgggacct
      181 aatccaacca ggccgaggtc acagcggagg agcgatgtgc caccgcagcc ctggcaggag
      241 cctcaggccg ccatcgccgc tgctgctgct gctgccattg ctgctgcagc ctccctgggc
      301 ggctggcgct gccagccaga gcgacccaac aggagtccac tgtgcaacag catactggtc
      361 ccctgaatcg aagaaagtgg aaatcaagac ggtactggac aagaatgggg acgcctacgg
      421 ctactacaat gactccatta aaaccacagg ctggggcatc ctggagatca gagctgggta
      481 cggctctcag gtcctgtcca atgagatcat catgtttttg gctggctacc tcgagggcta
      541 cctcactgct ctacacatgt acgaccactt cacgaacctg tacccacagc tgttcaagaa
      601 tccttccatt gtgaaaaaag tgcaagactt catggagaag caagaaatgt ggactaggca
      661 aaacatcaaa gcgcagaagg atgacccatt ctggagacac accggctatg tggtgaccca
      721 gctcgacggg ctgtatcttg gagctcagaa aagggcttca gaagagaaaa taaagcccat
      781 gacaatgttc caaattcagt tcctgaacgc cgttggtgac ctgttggacc ttattccctc
      841 cctatctccc acaaaaagca gcagcatgat gaagtttaag atttgggaaa tgggccactg
      901 ttctgctctt attaaggtcc ttcctggatt tgaaaacatc tattttgccc actcaagttg
      961 gtacacatat gcagccatgc tcaggatcta taaacattgg gacttcaaca tcaaggacaa
     1021 atacaccctc agcaaacggc tgtctttcag cagttatcca gggttcttgg agtctctgga
     1081 tgacttttat attctcagca gtggcctgat attgctgcag accacaaaca gtgtgtacaa
     1141 taaaaccctg ctgaagcagg tggtgcccaa gactctcctg gcctggcaaa gagtccgtgt
     1201 ggccaacatg atggccgagg gtggtaagga gtgggcacag atattttcaa agcacaactc
     1261 tggtacctac aacaaccagt acatggtcct ggacctgaag aaggtgacca tcaataggag
     1321 cctggacaaa ggcactctct atattgtgga gcaaatccct acatatgtag aatactccga
     1381 tcaaaccaat gtcctaagaa aaggatactg ggcttcctat aatatccctt tccacaaaac
     1441 aatctacaac tggagtggct accctctgct ggttcacaag ctgggcttgg actactctta
     1501 tgacttagct ccacgtgcca aaatcttcag gcgtgaccaa gggaacgtga cggacatggc
     1561 ctccatgaaa tatatcatgc gatacaacaa ttataaagag gacccctaca gcaaggggga
     1621 tccctgcagt accatctgct gtcgtgagga cctgaatgga gccagtccaa gccctggagg
     1681 atgctatgac accaaggtgg cagacatctt tcttgcatct cagtataaag cctatgccat
     1741 tagtggtccc acggtacaag atggactccc gccttttaac tggaatcggt tcaatgacac
     1801 gctccatcgg gggatgccag aagtctttga ctttaatttt gttaccatga aaccaatttt
     1861 gtcataggac aaaaagtgag acatagagat gacagaaagc tgcgaatagg acaccaaagg
     1921 cactcttagc tgtattttcc catctgtact cttaataaaa aatattaaat tccc
//
