LOCUS       XM_055019615            6150 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus pluripotency associated transcript 25
            (Platr25), transcript variant X1, mRNA.
ACCESSION   XM_055019615
VERSION     XM_055019615.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000079.7) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6150
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="13"
     gene            1..6150
                     /gene="Platr25"
                     /note="pluripotency associated transcript 25; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 342 long SRA reads, 7 Proteins, and 98%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 38 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:435366"
                     /db_xref="MGI:MGI:3645613"
     CDS             3575..5197
                     /gene="Platr25"
                     /codon_start=1
                     /product="zinc finger protein 782 isoform X1"
                     /protein_id="XP_054875590.1"
                     /db_xref="GeneID:435366"
                     /db_xref="MGI:MGI:3645613"
                     /translation="MKPGVVVYAFNPSTQEAEAGGFLSSRPAWSTKFVPGQPELYRET
                     LSQKKNKKTKNKKNMINNVSIVLSFAPVYEILQNAVTYKDVHVNFTQEEWALLDPSQK
                     KLYKDVMLETYRNLIAIGFNWDDKNIEEHCQSFGRHTRHERIQSAEKPSEYTQGGKAF
                     ALHAHSHAQRHERIHREKKPHGVIQFVEAFAQHSLQLRKRVQTGKKLYEWKQCGKAFE
                     DHSHLKSYEGILMGEKPYECHQWEKAFSSHSNLLQPKGRHTGEKCYECDLCGKAFSQH
                     SRLKRHGRIHTGEKPYKCDQCGKAFSEHCNLQKHKRIHTGEKPYKCHQCDKAFSQHHS
                     LQKHKRIHTGEKPYKCNECDKVFRQSSDLQKHRRIHTGEKPYKCNQCDKAFSQHHSLQ
                     IHKRTHTGEKPYKCNQCDKVFSRHSTLQIHIRIHAGEKPFKCNECEKAFSQHSNLQSH
                     RRIHTGKKPYKCNECEKAFSQHSNLQSHRRIHTGKKPYKCNTCEKAFSKHSILHSHRR
                     IHTGEKSYKCNHCEKVFLGHYDLQRHKGIHTG"
ORIGIN      
        1 cctcgaactc agaaatccgc ctgcctctgc ctcctgagtg ctgggattaa aggtgtgcgc
       61 caccatgccc ggctggtgca tactgttttc ttgattaagc catagttaaa tacttaaatg
      121 aactgcctgc accgccactc agttttaaac ttacctgttt gagtcatatc atcaactttc
      181 cactgcagta agggggaaag gatttgcatg tggagcatgg cttctgcctt cagaccagag
      241 taggacaaga ttcttgtgta attcacggag agaaatagtg caagcaaaca accgttagca
      301 tcactgtctt agtcacagtt tgtattcctc tacaaacatc atgactgaga ctcaaactgg
      361 ccagcctctt agagcacatg cccataaggc ccatttcaac ttttaaacaa tattttctga
      421 ctatacttat ggcatttcca ccatccatct tcagactcca aatccttcca taggcgactc
      481 attgtttatc atctaagagc tctttttgct tgaacaatag ttactgtttg aatgtgacct
      541 acgtctgcct gcaggacttt ccaactatga cgtgagttaa tggctgaaat ggactattgg
      601 agtgtaatag aatgcacaca caaggtactg tgtcctttga ttgaataaga agatgttctc
      661 tgggagactg gaagaatttc ttgataacta cagatttccc agactagggc cctgtctgcc
      721 cctgttgagg aagtacaggg ctaggtaggt ctgtgctgtc tgagtcattt gttctctgtt
      781 catccagtag caatgtcgct gctgtcctga ggtacagccg agtgactctg ggttgagatg
      841 aattctgggg agacctagtc attagaagca acattaagag gtatgttgtg gaatcctgct
      901 gggattctcc tgggatgcag cacgagtggt ctgtgaggta gaccacaagc aatactgtgc
      961 tgagtgtggc agccacggtt taggacagga gattccatgc ccaggaagag caggtaggct
     1021 gagctatcag aatctgatct gctgggcctg ggatggactg tgagtcagac agtggttctc
     1081 ttcgtccatg tggtgaactg agcagaaacc cttggcctct cagccttccc gagtttggac
     1141 ttcatgggga gagagaggtt ctgcagtcct ggcagtgtta aactgtggtc cttataaaat
     1201 tactatacag tgtacacact gagacattgt tttgtggatg tagtggaaag acaattttac
     1261 aaaataaatt tcttgtttct agggtttctg aacactgtat tccacagaca tgtttgtgtg
     1321 ataaatttta caaatagttt caaaactgag acatgaggtg atggggatta tacttggaag
     1381 aaagatcagt agtagctgga gggtgagaaa tataacagat taaggtccag tttgagtcat
     1441 tattgtgggc attgagaagt ctgtgttgtt ttaattttct acacataacg cctttggtaa
     1501 cactgatcaa gttcacattt tgcctctcag agttgcctta ggttcttggt gaaagcttta
     1561 ctaaactgag gtgctgtttt ttgcatttca aatgctatcc catctgctga tctcccctcc
     1621 ctgtcataga gacctttccc atggcttctc ctggccccag gtatcttccc acatttgctc
     1681 atcaagtctt ccccagatta ggagcatcag ataccatatc aggctacagg tttatcaaca
     1741 ggctctgctg cttggtcgta ccagctttgg ggggtttaca gctcaggtgg atgggacaca
     1801 gcattggatg agggccaaaa gactgatgat ctctggcctt gtatctttct ccaattgtac
     1861 tggatgctat ccactaatgg cttctagaga cttgacacgc tcttgctcat agtgtggatg
     1921 aaaatggctg gctttcctat ttatcttgct gtgcattttt tttactttat aaaactctgt
     1981 gctttattaa ttgctgtatc ttcactttat aactctctat tgctattgtg tgctttatta
     2041 agccctgaaa acttaactcc ttcttaactt tatgactgtt ctgtgcttca tggcttgctg
     2101 gggaatctta actcttttat acaatcttgt ggtaaaatct aaactctttc ttattattct
     2161 gtggtacatt aagtcatgaa taaacaattc tttattaact ctttatgtct gttacatctt
     2221 actatggtta taaacttaac tctttattat ttgtacataa atatatgcta atatctgggg
     2281 attaaaacat gctggttagc ctgtggggat attaaataca aggatttttt gtttgtttgt
     2341 ttgtttgttt gtttgtttat tatatacact gtagctgtct tcagacactc cagaagaggg
     2401 catcagatct cattacggat ggttgtgagc caccatgtgg ttgctgggat ttgaactcag
     2461 gacctttgga agagcagtcg gccctcctaa ctgctgagtc taaatcacta ccaccactgt
     2521 gtttttaaat tacttgctga atcatgtatg taatcaactt ttttattaca gtaagaggaa
     2581 caggatttgc ctgatgggca tagcttctgc attcacacca gaagataagg gagtttattg
     2641 tgatccctac tggggaaaca gggtaggcaa tcagctgctg gagtcgccct tatgaacaag
     2701 acccgattat ggcagggaga tgatttttaa ttttggatca tgtattaatc atgttctgtg
     2761 atgaagacag cctatattga tgggtgtttg atttgtgaat gtcagttaag ccaatgagca
     2821 ttcaatttgc atgtagggta ctgctataca gattgattaa ctctggcaag ggacacaggt
     2881 tcttactatg tacctttgtc tgtcctagaa ctctttggat atatcacact ggcatccaac
     2941 tcaatgtgat acttctgctt ctgtcccctg actgtagtgt taatgacata agccaataga
     3001 cccagcatac tgattgattt ttttttttaa ataaagtttt attgaaatgc agccggcctt
     3061 attgtttgtt atcctcaagt cccccatccc catccccctt ggtgctaagg ctgatttttt
     3121 tttttaatat ttatttattt attatatgta agtacactgt agctgtcttc agacacacca
     3181 gaagagggca tcagatttca ttacagatgg ttatgaacca ccatgtggtt gctgggattt
     3241 gaactcatga cctttgagtc ggcgctctta accgctgagc catctcacca gcccctgatt
     3301 gatttttata gttagtaact gttaatgtta atacaatttc tttaatgtgt ggtaagccct
     3361 gctgatcttg tagagcttgc atcctcttta tgtctgtaat tgacaattct ctaggaaggc
     3421 tatatcctat ccaaaggact gagaaatgac aggggtgaac ctcattatta agtatccttc
     3481 taacatgact cggtagttac agtagagctt ctttgtcagg aaataagtgg ggcacgcccc
     3541 agaattatat gaacacattg tctatgaaga atacatgaag ccgggtgtgg tggtgtacgc
     3601 ttttaatccc agcactcagg aggcagaggc cggtggattt ctgagttcga ggccagcctg
     3661 gtctacaaag tttgttccag gacagccaga gctatacaga gaaaccctgt ctcaaaaaaa
     3721 aaacaaaaaa acaaaaaaca aaaaaaacat gatcaataat gtctctattg tactttcttt
     3781 tgcacctgta tatgagattc tacagaatgc agtgacttat aaagacgtac atgtgaactt
     3841 cactcaagag gagtgggctc tgctggatcc ttcccagaag aagctctaca aagatgtcat
     3901 gctggagacc tacaggaacc tcatcgctat aggatttaat tgggacgaca aaaatattga
     3961 agaacattgt caaagttttg gaagacacac aaggcatgaa agaattcaga gtgcagagaa
     4021 accctctgaa tatactcaag gtggtaaagc atttgcttta catgctcaca gtcatgctca
     4081 aaggcatgaa aggattcata gagaaaagaa accccatgga gttattcaat ttgttgaagc
     4141 ctttgctcaa catagtctcc aacttcgtaa aagagtacaa actggaaaga aactctatga
     4201 atggaagcaa tgtggtaaag cctttgaaga tcacagtcat cttaaaagct atgaaggaat
     4261 tcttatggga gagaaacctt atgaatgtca ccagtgggaa aaagcctttt caagtcacag
     4321 taatctccta caacctaaag gaagacatac tggagagaaa tgctatgaat gtgatctgtg
     4381 tggtaaagcc ttttcacaac atagtcggct taaaaggcat ggaagaattc atactggaga
     4441 gaaaccctac aaatgtgatc aatgtggtaa agccttttca gaacactgta atctccaaaa
     4501 gcataaaaga atacatacag gagagaaacc ctacaaatgt catcaatgtg acaaagcctt
     4561 ttcccaacat catagtctcc aaaagcataa aagaatacat acaggagaga aaccctacaa
     4621 atgtaatgaa tgtgataaag tatttagaca aagcagtgat ctccagaagc atagaagaat
     4681 acatacagga gaaaaaccct acaaatgtaa tcagtgtgac aaagcctttt cccaacatca
     4741 tagtctccaa atacataaga gaacacatac aggagagaaa ccctataaat gtaatcaatg
     4801 tgacaaagtc ttttccaggc atagtacgct ccaaatacat ataagaatac atgctggaga
     4861 gaaacccttc aaatgtaatg aatgtgagaa agccttttca caacatagta acctccagtc
     4921 gcatagaaga attcatactg gaaagaaacc ctacaaatgt aatgaatgtg agaaagcctt
     4981 ttcacaacat agtaacctcc agtcacatag aagaattcat actggaaaga aaccctacaa
     5041 atgtaataca tgtgaaaaag ccttttcaaa acatagtata ctccattcac atagaagaat
     5101 tcatactgga gagaaatcct acaaatgtaa tcactgtgag aaagtctttt taggacatta
     5161 tgatcttcaa agacataaag gaatacatac tggatagaaa cccgatgaat gtgatctatg
     5221 tgtgaaagcc catgtacgtc acaggaatct tcaaaagcat aaaagaattc atactgtaaa
     5281 gaacgcttat gaatgtatat aatatggtaa aatctacaaa tattcatagt cttaatcttc
     5341 atgaacatat ttgtattgac aagaaaccct ctgaatatta actgtgtgat aaaacctatc
     5401 ccaacacact tatctcctaa tgcatcaagg agcacatact ggggagacag aggttggggc
     5461 ggttaactta tgaatgtaca caatgtggta agcctttgca tatgacagtc atctttgaac
     5521 atttaaaaaa aatacataat gtatcacaat acaagaaaaa acactctggt gaaacctttg
     5581 taaataatat ggtaaggcct tggcaggtga catttatctc gtaatgtatg aaacaacact
     5641 tgtaagaaac ttcatgaaaa taagcaatgt ggtaaagctt gtgcgtgtac gagtcattct
     5701 ggaaattatg agaaaagtcc atgctgcagg gaagccctat aaatgtagtc attgtgggaa
     5761 atttttgcac ttcacagtgt gggaactaga catggtgtaa ggatgtaaac tctgaagttc
     5821 agccacagtg acatattttc tccagtaggg gaacatttcc ttaatctccc caaatgacac
     5881 taccaactga gaaggattga tttctttgct tttaagcctt tatgattgct ttgtgttaca
     5941 tgagcgcatt catgatgaag gaaaactggg taagccttca gatgcctcca ctcctgtgtt
     6001 atagtaatga attcttgtat aagaagaaca gcatgagaaa atatgagatt tgtctgtggc
     6061 tttgtgtgag gatgtgcatg ctgatttcca agaaaattaa gctgctgtac cttcttatag
     6121 caggaaataa aggaagatgt caaaccctga
//
