LOCUS       XM_036159503            3625 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus phospholipase A2, group VI (Pla2g6),
            transcript variant X1, mRNA.
ACCESSION   XM_036159503
VERSION     XM_036159503.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3625
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..3625
                     /gene="Pla2g6"
                     /gene_synonym="iPLA(2)beta; iPLA2; iPLA2beta; PNPLA9"
                     /note="phospholipase A2, group VI; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 27 ESTs, 388 long SRA reads, and 96% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 10 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:53357"
                     /db_xref="MGI:MGI:1859152"
     CDS             241..3102
                     /gene="Pla2g6"
                     /gene_synonym="iPLA(2)beta; iPLA2; iPLA2beta; PNPLA9"
                     /codon_start=1
                     /product="85/88 kDa calcium-independent phospholipase A2
                     isoform X1"
                     /protein_id="XP_036015396.1"
                     /db_xref="GeneID:53357"
                     /db_xref="MGI:MGI:1859152"
                     /translation="MQFFGRLVNTLSSVTNLFSNPFRVKEVSLTDYVSSERVREEGQL
                     ILLQNVSNRTWDCVLVSPRNPQSGFRLFQLESEADALVNFQQFSSQLPPFYESSVQVL
                     HVEVLQHLTDLIRNHPSWTVTHLAVELGIRECFHHSRIISCANSTENEEGCTPLHLAC
                     RKGDSEILVELVQYCHAQMDVTDNKGETAFHYAVQGDNPQVLQLLGKNASAGLNQVNN
                     QGLTPLHLACKMGKQEMVRVLLLCNARCNIMGPGGFPIHTAMKFSQKGCAEMIISMDS
                     NQIHSKDPRYGASPLHWAKNAEMARMLLKRGCDVDSTSSSGNTALHVAVMRNRFDCVM
                     VLLTYGANAGARGEHGNTPLHLAMSKDNMEMVKALIVFGAEVDTPNDFGETPALIASK
                     ISKLITRKALLTLLKTVGADHHFPIIQGVSTEQGSAAATHPLFSLDRTQPPAISLNNL
                     ELQDLMPISRARKPAFILSSMRDEKRSHDHLLCLDGGGVKGLVIIQLLIAIEKASGVA
                     TKDLFDWVAGTSTGGILALAILHSKSMAYMRGVYFRMKDEVFRGSRPYESGPLEEFLK
                     REFGEHTKMTDVKKPKVMLTGTLSDRQPAELHLFRNYDAPEAVREPRCNQNINLKPPT
                     QPADQLVWRAARSSGAAPTYFRPNGRFLDGGLLANNPTLDAMTEIHEYNQDMIRKLPQ
                     GAAAGPGQDGTWVCSCCSCCSCCSCCSCCSCSCCCCCSCCSCCSCCCCCSCCSCCSCC
                     SCCSCCCCCSCCSCCCCCSCCSCCSCCSCCCSCCSCSCSCSYSLSYSRSRVLSVPHSP
                     LPSLGPVLTPIPTCGKSSLTTLSCSSQGQGNKVKKLSIVVSLGTGKSPQVPVTCVDVF
                     RPSNPWELAKTVFGAKELGKMVVDCCTDPDGRAVDRARAWCEMVGIQYFRLNPQLGSD
                     IMLDEVSDAVLVNALWETEVYIYEHREEFQKLVQLLLSP"
ORIGIN      
        1 gagtgacggc gcggcggggg cggggcctga cggccctttc ccaaacctcc tggtgcccct
       61 gtcttgaatg tcgtcacctg gaccctgctt aggaccggcc tcgtgtctgc gactctgagt
      121 tctctagcct ccaatcctgg gttcacctcc agctccctcc gatgacctgg aagctggcga
      181 ctaggagcct gtgacccaga gcagaggggc aggctgggtc tctccgctgc cccacagagg
      241 atgcagttct tcggacgcct cgtcaacacc ctcagtagcg tcaccaactt gttctcgaac
      301 ccattccggg tgaaggaggt gtccctgact gactacgtct caagtgaacg tgtccgggag
      361 gaagggcagc tgatcctgtt acagaatgtc tccaatcgca cctgggactg tgtcctggtc
      421 agcccgagga acccacagag cggcttccgg ctcttccaac tggagtctga ggcagacgcc
      481 ctggtgaact tccagcagtt ctcctcccag ctgccgccct tctacgagag ctctgtgcag
      541 gtcctgcatg tggaggtgct tcagcacctg accgacctca tccggaacca ccccagctgg
      601 acagtgacac acctagccgt ggagctcggc atccgggagt gcttccatca cagccgcatc
      661 atcagctgtg ccaacagcac agagaatgag gagggctgca ccccactaca tctggcctgc
      721 cgcaagggtg acagtgagat cctggtggag ctggtacaat actgccacgc ccagatggat
      781 gtcactgaca acaaaggaga gactgccttc cattacgctg tgcaagggga caatccccag
      841 gtgctacagc tcctagggaa gaacgcctca gccggcctga accaggtaaa caaccaaggg
      901 ctgactccac tgcacctggc ctgcaagatg ggaaagcagg agatggtgcg cgtcctgctg
      961 ctctgtaatg cccgctgcaa catcatgggg cccggtggct tccccatcca cacagccatg
     1021 aagttttccc agaaggggtg tgctgaaatg attatcagca tggacagcaa ccagatccac
     1081 agcaaggatc ctcgctacgg agccagccca ctccattggg ccaagaacgc cgagatggcc
     1141 cgaatgctgc tgaagcgggg ctgtgacgtg gacagcacta gctcctcagg gaacacagcc
     1201 ctgcatgtgg cggtgatgcg caaccgcttt gactgtgtca tggtgctgct gacctacggg
     1261 gctaatgcag gtgcccgcgg agagcacggg aacacgccac tgcacctggc catgtcgaaa
     1321 gataacatgg agatggtcaa agccctcatt gtatttgggg cagaagtgga caccccaaac
     1381 gactttgggg agactcctgc attgatagcc tccaagatca gcaagctgat taccaggaag
     1441 gcgctcttga ctctgctgaa aacggtgggg gccgaccacc actttccaat catccagggg
     1501 gtctccacgg agcagggctc tgcagctgca actcaccccc tcttctctct ggacaggact
     1561 cagcccccag cgatcagctt aaacaaccta gagcttcagg atctcatgcc catctctcga
     1621 gcccggaagc cagcgttcat cctgagctcc atgagggacg agaagcggag tcacgaccac
     1681 ctgctctgcc tggacggagg gggcgtgaaa ggcctggtca ttatccagct tctcatcgcc
     1741 atcgagaagg cctcgggagt ggccaccaag gacctcttcg actgggtggc aggaaccagc
     1801 acagggggca tcctggccct ggccattctg cacagtaaat ccatggccta tatgcgtggt
     1861 gtgtacttcc gtatgaagga cgaggtgttt cggggctcac ggccctatga gtctgggccc
     1921 ctggaggagt tcctgaagcg ggagtttggg gagcacacca agatgacaga tgtcaaaaaa
     1981 cccaaggtga tgctgacagg gacactgtct gaccggcagc cagcagagct ccacctattc
     2041 cggaattacg atgctcccga agccgttcga gagccccgct gcaaccaaaa cattaacctg
     2101 aagccaccga ctcagcctgc agaccaactg gtatggcgtg cagcccggag cagtggggca
     2161 gccccaacct atttccggcc caatggacgc ttcctggatg gagggctgct ggccaacaac
     2221 cccacactgg atgccatgac tgaaatccat gagtacaatc aggacatgat ccgcaagctc
     2281 ccacagggag cagctgcagg acctggccag gatggaacct gggtctgctc ctgctgctcc
     2341 tgctgctcct gctgctcctg ctgctcctgc tgctcctgct cctgctgctg ctgctgctcc
     2401 tgctgctcct gctgttcctg ctgctgctgc tgctcctgct gctcctgctg ctcctgctgc
     2461 tcctgctgct cctgctgctg ctgctgctcc tgctgctcct gctgctgctg ctgctcctgc
     2521 tgctcctgct gctcctgctg ctcctgctgc tgctcctgtt gttcctgctc ctgctcctgc
     2581 tcctactccc tctcctactc ccgctccagg gtcttatctg tccctcacag ccctctgccc
     2641 agcctcggtc ctgttctgac tcctatccct acctgtggga agtcctctct gaccaccctt
     2701 tcttgctcat cccagggcca gggcaacaag gtgaagaaac tctccatagt cgtttctctg
     2761 gggacaggaa agtcccctca agtgcctgta acctgtgtag atgtctttcg tcccagcaac
     2821 ccttgggaac tggccaaaac tgtttttgga gccaaggaac tgggcaagat ggtcgtggac
     2881 tgttgcacag atccagatgg gcgggctgtg gatcgggccc gggcctggtg cgagatggtc
     2941 ggcatccagt acttcagact gaacccccag ctagggtccg acatcatgct ggacgaggtc
     3001 agtgatgcag tgctggtcaa cgccctctgg gagaccgagg tctacatcta tgagcaccga
     3061 gaggagttcc agaagcttgt ccagctgctg ctgtctccct gagctcccgg ggcctgccag
     3121 cacactgagg gccaagctgg gcctggcagc tccatgtcca tctgacacta ggactcagag
     3181 cacaaaccgg ttcccacgag gcacctctcc tggtccatct gcactttact actcgaggct
     3241 gaaagcccag agttcccctc agcccctttc cctgactatg aaggacaact gactccatca
     3301 aggaccccac atatcagaga tcaacactac ggtgccagtg gtcccaggct ccctggccac
     3361 tgctgctcac cccttctgcc caccccctga tgtcagggac tagagaaaag gggttccacc
     3421 ctatcctagt ggaatccagg ctaatggcat ccagcgccat tcgactttgc ccctcgcacc
     3481 tgccagcctc tccaccctgc cgccaccgca ctaggagccc tcctagctcc caaaggtcaa
     3541 ccctgtgcat gtgctcttct ctggaaggag agtggggagg ggctcagggc cacctcaact
     3601 gtgaaataaa cgggtttaca ctcaa
//
