LOCUS       XM_006539635            2108 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus paired Ig-like receptor B (Pirb),
            transcript variant X2, mRNA.
ACCESSION   XM_006539635
VERSION     XM_006539635.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006539635.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2108
                     /gene="Pirb"
                     /gene_synonym="Gp91; Lilrb3; LIR-3; PIR-B"
                     /note="paired Ig-like receptor B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     ESTs, 12 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:18733"
                     /db_xref="MGI:MGI:894311"
     CDS             46..1989
                     /gene="Pirb"
                     /gene_synonym="Gp91; Lilrb3; LIR-3; PIR-B"
                     /codon_start=1
                     /product="leukocyte immunoglobulin-like receptor subfamily
                     B member 3 isoform X2"
                     /protein_id="XP_006539698.1"
                     /db_xref="GeneID:18733"
                     /db_xref="MGI:MGI:894311"
                     /translation="MSCTFTALLRLGLTLSLWIPVLTGSLPKPILRVQPDSVVSRRTK
                     VTFLCEETIGANEYRLYKDGKLYKTVTKNKQKPENKAEFSFSNVDLSNAGQYRCSYST
                     QYKSSGYSDLLELVVTGIYEYYEPRLSVLPSPVVTAGGNMTLHCASDFPYDKFILTKE
                     DKKFGNSLDTEHISSSGQYRALFIIGPTTPTHTGAFRCYGYYKNAPQLWSVPSALQQI
                     LISGLSKKPSLLTHQGHILDPGMTLTLQCFSDINYDRFALHKVGGADIMQHSSQQTDT
                     GFSVANFTLGYVSSSTGGQYRCYGAHNLSSEWSASSEPLDILITGQLPLTPSLSVQPN
                     HTVHSGETVSLLCWSMDSVDTFILSKEGSAQQPLRLKSKSHDQQSQAEFSMSAVTSHL
                     SGTYRCYGAQDSSFYLLSSASAPVELTVSGPIETSTPPPTMSMPLGGLHMYLKALIGV
                     SVAFILFLFIFIFILLRRRHRGKFRKDGEEVQKEKDLQLSSGAEEPITRKGELQKRPN
                     PAAATQEESLYASVEDMQTEDGVELNSWTPPEEDPQGETYAQVKPSRLRKAGHVSPSV
                     MSREQLNTEYEQAEEGQGANNQAAESGESQDVTYAQLCSRTLRQGAAASPLSQAGEAP
                     EEPSVYATLAAARPEAVPKDMEQ"
ORIGIN      
        1 tagctctgcc cttgagcaca gttgcagcca ctgaggggag atgccatgtc ctgcaccttc
       61 acagccctgc tccgtcttgg actgactctg agcctctgga tcccagtgct gacagggtcc
      121 ctccctaagc ctatcctcag agtacagcca gactctgtgg tctccaggag gactaaggtg
      181 accttcttgt gtgaagagac aattggagcc aatgagtacc gcctctataa agatggaaag
      241 ctatataaaa ccgtaacaaa gaacaaacag aagccagaaa acaaggctga attctcattc
      301 tcaaatgtag acctgagtaa tgcaggtcaa tatcgatgtt cctacagcac ccagtataaa
      361 tcatcaggct acagtgacct cctggagctg gtggtgacag gaatctatga atactatgaa
      421 cccaggctgt cagtactgcc cagccctgtg gtgacagctg gagggaacat gacactccac
      481 tgtgcctcag actttcccta cgataaattc attctcacca aggaagataa gaaattcggc
      541 aactcactgg acacagagca tatatcttct agtggacagt accgagccct gtttattata
      601 ggacccacaa ccccaaccca tacaggggca ttcagatgtt acggttacta caagaatgcc
      661 ccacagctgt ggtcagtacc tagtgctctc caacaaatac tcatctcagg gctgtccaag
      721 aagccctctc tgctgactca ccaaggccat atcctggacc ctggaatgac cctcaccctg
      781 cagtgtttct ctgacatcaa ctatgacaga tttgctctgc acaaggtggg gggagctgac
      841 atcatgcagc actctagcca gcagactgac actggcttct ctgtggccaa cttcacactg
      901 ggctatgtga gtagctccac tggaggccaa tacagatgct atggtgcaca caacctctcc
      961 tctgagtggt cagcctccag tgagcccctg gacatcctga tcacaggaca gctccctctc
     1021 actccttccc tctcagtgca gcctaaccac acagtgcact caggagagac cgtgagcctg
     1081 ctgtgttggt caatggactc tgtggatact ttcattctgt ccaaggaggg atcagcccag
     1141 caacccctgc gactaaaatc aaagtcccat gatcagcagt cccaggcaga attctccatg
     1201 agtgctgtga cctcccatct ctcaggcacc tacaggtgct atggagctca agactcatct
     1261 ttctacctct tgtcatctgc cagtgcccct gtggagctca cagtctcagg acccatcgaa
     1321 acctctaccc cgccacccac aatgtccatg ccactaggtg gactgcatat gtacctgaag
     1381 gctctcattg gagtgtctgt ggccttcatc ctgttcctct tcatcttcat cttcattctt
     1441 cttcgacgaa gacatcgggg aaaattcagg aaagatggtg aggaggtcca gaaagagaaa
     1501 gacttgcaac tttcttcagg agctgaagag cccataacca ggaaaggaga actccagaag
     1561 aggcccaacc cagctgctgc cacccaggaa gaaagcctat atgcttcagt ggaggacatg
     1621 caaactgagg atggagtgga gctgaacagc tggacaccac ctgaggaaga tccccaggga
     1681 gagacttatg cccaggtgaa accctccagg ctcaggaagg caggacatgt ctcaccttct
     1741 gtcatgtcaa gggaacaact gaacacagaa tatgaacaag cagaagaggg ccaaggagca
     1801 aacaatcagg ctgccgaatc tggggagtcc caggatgtga cctatgccca gctgtgcagc
     1861 aggacactca gacagggggc agctgcatct cctctctccc aggcagggga agccccagag
     1921 gagcccagtg tatatgctac tctggcggct gctcgtccag aggctgttcc caaggacatg
     1981 gagcaatgac cccctgcctg ccaggatgcc tagcagagac ctccaaggga ctctgggaac
     2041 ttttggaaac gtgactgcac tttaagtaac atcagagttt ggaaataaag ctagagattt
     2101 ctcaataa
//
