LOCUS       NM_011089               3464 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus paired-Ig-like receptor A2 (Pira2), transcript variant
            1, mRNA.
ACCESSION   NM_011089 XM_486458
VERSION     NM_011089.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3464)
  AUTHORS   Liu X, Jiao Y, Cao Y, Deng N, Ma Y, Hasty KA, Kang A, Chen H,
            Stuart JM and Gu W.
  TITLE     Decreased expression levels of Ifi genes is associated to the
            increased resistance to spontaneous arthritis disease in mice
            deficiency of IL-1RA
  JOURNAL   BMC Immunol 17 (1), 25 (2016)
   PUBMED   27480124
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3464)
  AUTHORS   Kubagawa H, Burrows PD and Cooper MD.
  TITLE     A novel pair of immunoglobulin-like receptors expressed by B cells
            and myeloid cells
  JOURNAL   Proc Natl Acad Sci U S A 94 (10), 5261-5266 (1997)
   PUBMED   9144225
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC161409.11 and AK140776.1.
            
            On Mar 21, 2007 this sequence version replaced NM_011089.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK172046.1, AK140776.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1                 AC161409.11        87893-87893         c
            2-1347              AK140776.1         2-1347
            1348-1790           AK140776.1         1354-1796
            1791-1791           AC161409.11        83851-83851         c
            1792-3216           AK140776.1         1798-3222
            3217-3464           AC161409.11        79652-79899         c
FEATURES             Location/Qualifiers
     source          1..3464
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 2.21 cM"
     gene            1..3464
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /note="paired-Ig-like receptor A2"
                     /db_xref="GeneID:18725"
                     /db_xref="MGI:MGI:1195970"
     exon            1..62
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..2071
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1"
                     /codon_start=1
                     /product="paired-Ig-like receptor A2 isoform 1 precursor"
                     /protein_id="NP_035219.2"
                     /db_xref="CCDS:CCDS39731.1"
                     /db_xref="GeneID:18725"
                     /db_xref="MGI:MGI:1195970"
                     /translation="MSCTFTALLCLGLTLSLWIPVLTGSLPKPILRVQPDSVVSRRTK
                     VTFLCEETIGANEYRLYKDGKLYKTVTKNKQKPANKAEFSFSNVDLSNAGQYECSYST
                     QYKSSGYSDPLKLVVTEDYWTPSLSAQASPVVTSGGYVTLQCESWPSYDRFILTVAGP
                     QKFSWTQDSQYNYSTRKNHALFSVGPVTPNQRWIFRCYSYDRNRPYVFSAPSESVELL
                     VSGNLQKPTIKAEPGSVITSKRAMTIWCQGNLDAEVYFLHNEKSQKTQSTQTLQEPGN
                     KGRFFIPSVTQQHAGQYRCYCYSSAGWSQPSDTLELVVTGIYEYYEPRLSVLPSPVVT
                     AGGNMTLHCASDFHYDKFILTKEDKKFTSSLDTEHISSSRQYRALFIIGPTTPTHTGT
                     FRCYGYYKNAPQLWSVPSALQQILISGLSKKPSLLTHQGHTLDPGMTLTLQCFSDINY
                     DRYALHKVGRADIMQHSSQQTDTGFSVANFTLGYVSSSTGGQYRCYGAHNLSSEWSAS
                     SEPLDILITGQLPLTPSLSVQPNHTVHSGETVSLLCWSMDSVDTFILSKEGSAQQPLR
                     LKSKSHDQQSQAEFSMSAVTSHLSGTYRCYGAQDSSFYLLSSASAPVELTVSETIESS
                     TWSPKRPIPPIPTENKDHTMENLIRMGMAVLVLIVLSILATEAWRSHRQTHPAAGN"
     exon            63..98
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     exon            99..383
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     exon            384..689
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     exon            690..974
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     exon            975..1283
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     exon            1284..1580
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     exon            1581..1883
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     exon            1884..1934
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
     exon            1935..3464
                     /gene="Pira2"
                     /gene_synonym="6M23"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagttggag ccactgaggg gagatgccat gtcctgcacc ttcacagccc tgctctgtct
       61 tggactgact ctgagcctct ggatcccagt gctgacaggg tccctcccta agcctatcct
      121 cagagtacag ccagactctg tggtctccag gaggactaag gtgaccttct tgtgtgagga
      181 gacaattgga gccaatgagt accgcctcta taaagatgga aagctatata aaaccgtaac
      241 aaagaacaaa cagaagccag caaacaaggc tgaattctca ttctcaaatg tagacctgag
      301 taatgcaggt caatatgaat gttcctacag cacccagtat aaatcatcag gctacagtga
      361 ccccctgaag ctggtggtga cagaagacta ctggacaccc agcctttcag cccaggccag
      421 cccagtggta acttcaggag ggtatgtcac cctccagtgt gagtcctggc cgagctatga
      481 caggttcatt ttgactgtag caggaccaca gaagttctca tggacacaag actcacagta
      541 taactactct acacggaaga accacgccct gttctctgtg ggccctgtga cccccaacca
      601 gagatggata ttcagatgtt acagttatga caggaataga ccatatgtgt tctcagctcc
      661 aagtgaatcc gtggagctcc tggtctcagg taatctccaa aaaccaacca tcaaggctga
      721 accaggatct gtgatcacct ccaaaagagc aatgaccatc tggtgtcagg ggaacctgga
      781 tgcagaagta tattttctgc ataatgagaa aagccaaaaa acacagagca cacagaccct
      841 acaggagcct gggaacaagg gcaggttctt catcccttct gtgacacaac aacatgcagg
      901 gcaatatcgc tgttattgtt acagctcagc tggttggtca cagcccagtg acaccctgga
      961 gctggtggtg acaggaatct atgaatacta tgaacccagg ctgtcagtac tgcccagccc
     1021 tgtggtgaca gcaggaggga acatgacact ccactgtgcc tcagactttc actacgataa
     1081 attcattctc accaaggaag ataagaaatt caccagctca ctggacacag agcatatatc
     1141 ttctagtaga cagtaccgag ccctgtttat tataggaccc acaaccccaa cccacacagg
     1201 gacattcaga tgttatggtt actacaagaa tgccccacag ctgtggtcag tacctagtgc
     1261 tcttcaacaa atactcatct cagggctgtc caagaagccc tctctgctga ctcaccaagg
     1321 ccataccctg gaccctggaa tgaccctcac cctgcagtgt ttctctgaca tcaactatga
     1381 cagatatgct ctgcacaagg tggggagagc tgacatcatg cagcactcta gccagcagac
     1441 tgacactggc ttctctgtgg ccaacttcac actgggctat gtgagtagct ccactggagg
     1501 ccaatacaga tgctatggtg cacacaacct ctcctctgag tggtcagcct ccagtgagcc
     1561 cctggacatc ctgatcacag gacagctccc tctcactcct tccctctcag tgcagcctaa
     1621 ccacacagtg cactcaggag agaccgtgag cctgctgtgt tggtcaatgg actctgtgga
     1681 tactttcatt ctgtccaagg agggatcagc ccagcaaccc ctgcgactaa aatcaaagtc
     1741 ccatgatcag cagtcccagg cagaattctc catgagtgct gtgacctccc atctctcagg
     1801 cacctacagg tgctatggag ctcaagactc atctttctac ctcttgtcat ctgccagtgc
     1861 ccctgtggag ctcacagtct cagaaaccat tgaatcctcc acctggtctc ccaaaaggcc
     1921 catcccacca attcccacag agaacaagga tcacacaatg gagaatctca tcaggatggg
     1981 gatggcagtc ctggtcctca tcgtcctttc gattctagcc actgaggctt ggcgaagcca
     2041 tagacagacc caccctgcag ctgggaacta atctaaagaa aaaagaatgc atcttcaatg
     2101 ttctacactc tgggaaataa agctgatgac ccaaagtttt ctgtcaaaag aaaaaaaaaa
     2161 tcctgttgtg gtattgagga actgttgtaa gaatgtctag gaagcaaaag tttggggttc
     2221 agagggaagt ggaagtgtca taatgaggtg cttcctcaat aaatgaatta ctgtccctcc
     2281 acatactggg agcctttgtt tcctgaaccc acactcttct gagcccataa agtgagggaa
     2341 taggctgtcc cacctgcctg gaatatcttt cacctgtgaa ttgtattttt ctgtattact
     2401 ttatgggatg tattcattca catttaaagg cctctgtcat ctttatgaat tgtatttaag
     2461 gacagttcct tgtatgtgtg tgagtgtgca tatacaggag ggtcgggtgt atgtattagc
     2521 ctactgccat tgtgtgttct ttcaggcaac ttggtgggca ggggcttggg agacaaaggc
     2581 ttagttgatg ttccttgtgg cagcagacct cctggaaagc atgcagtcct tggggtagga
     2641 aatggagtac tcagtgtagg ttattgctct ttcctaagtt ttcaggggag ttggcaggac
     2701 agggcttggt gaggagacgc ttacctggtg tcccttagga cggcagccct ctgagtaatc
     2761 aggcagggtt gtggctgcta ctatttttta aagaaacaaa ccaataaaat gactcctggg
     2821 tcaatgtctt gctcagcatc ctcctgcagg agatgggaac ttatgcagat acccacaact
     2881 gaacactgca gagaaagatc tgaaaatact gaatcctgaa tgggtaaata cttgcaaaag
     2941 aacatttagt ttttctaaca agtcacactg gtacacaaag cacactgaag ggcaggtctc
     3001 atgcccagcg gtacgtggcc aacactaaat gaactcactg gtattttcga agtctgtgct
     3061 tataatgctt gtctgttact tatatattat gatgacctgt catgtgcttt tagacgactt
     3121 cagggaattc ataatgtata tgtataaaaa aaaatcacag tactagacac ctcacaaata
     3181 tacagttcta tttaccaagg attcctgtat aattagcaaa aagattttca ttgttttctt
     3241 cttccatttt tccattctgt gtgactactt acattattgt gcctaatgtc atttcactgt
     3301 gaatttcatt ttttaagttt ttgtgattta aatgcattta tacatcaaat gtattagtaa
     3361 tgagtacttt gagaatcata taatacataa aactttgttc aacttttata ttcatatcct
     3421 ttcatatcct aaactatcat taataaatat ttaatactat ctat
//
