LOCUS       XM_003084682            2338 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus paired-Ig-like receptor A13 (Pira13),
            transcript variant X1, mRNA.
ACCESSION   XM_003084682
VERSION     XM_003084682.7
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_003084682.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2338
                     /gene="Pira13"
                     /note="paired-Ig-like receptor A13; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 40
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100041146"
                     /db_xref="MGI:MGI:3705216"
     CDS             120..2168
                     /gene="Pira13"
                     /codon_start=1
                     /product="leukocyte immunoglobulin-like receptor subfamily
                     B member 3 isoform X1"
                     /protein_id="XP_003084730.1"
                     /db_xref="GeneID:100041146"
                     /db_xref="MGI:MGI:3705216"
                     /translation="MSCTFTARLCLGLTLSLWIPVLTGSLPKPILRVQPDSVVSRWTK
                     VTFLCEETIGANEYRLYKDGKLYKTVTKNKQKPANKAEFSFSNVDLSNAGQYECSYST
                     QYKSSGYSDLLELVVTEDYWTPSLSAQASPVVTSGGYVTLQCESSQSYHRFILTVEGP
                     QNLIWRQDSQYNYSTRKYHALFSVGPVTPNQRWICRCYSYDRNRPYVWSPPSESVELL
                     VSGNLQKPTIKAEPSSVITSERAMTIWCQGNLDAEVYFLHNEKSQKTESTQTLQQPGN
                     KGKFFIPSVTQQHAGQYRCYCYSSAGWSEPSDTLELVVTGIYEHYELRLSALPSTVVT
                     AGGNMTLHCASHSHYDKFILMKEDKKFTNSLDTVYISSSRQYQALFIIGPTTPTHTGT
                     FRCYGYYKNAPQLWSVPSDLQQILISGLSKKPSLLTHQGHILDPGMTLTLQCFSDINY
                     DRFALHKVGGADIMQHSSQQTDTGFSMANFTLGYVSSSTGGQYRCYGAHNLSSEWSAS
                     SDPVDVLILIPGQLPITPSLLVKPNHTVHSGETVSLLCWSMDPVETFILSKEGSAQQP
                     LRLKSKSHDQQSQAEFSMSAVTSHLSGTYRCYGAQDSSFYLLSSASSPVELTVSGTIE
                     SSTWSPKRPIPPIPTENQDHTTENLIRMGMAVVVLIVLSILATEAWRSHRQTHPAAGN
                     "
ORIGIN      
        1 tatatgacca tgtcatgggg actgccctgc ctccagtgcc acaccctgta cacaatccct
       61 tcagaaaggc tctgtagctc tgcccttgag cacagttgca gccactgagg ggagatgcca
      121 tgtcctgcac cttcacagcc cggctctgtc ttggactcac tctgagcctc tggatcccag
      181 tgctgacagg gtccctccct aagcctatcc tcagagtaca gccagactct gtggtctcca
      241 ggtggactaa ggtgaccttc ttgtgtgaag agacaattgg agccaatgag taccgcctct
      301 ataaagatgg aaagctatat aaaaccgtaa caaagaacaa acagaagcca gcaaacaagg
      361 ctgaattctc attctcaaat gtagacctga gtaatgcagg tcaatatgaa tgttcctaca
      421 gcacccagta taaatcatca ggctacagtg acctcctgga gctggtggtg acagaagact
      481 actggacacc cagcctttca gcccaggcca gcccagtggt aacttcagga gggtatgtca
      541 ccctccagtg tgagtcctcg cagagctatc acaggttcat tttgactgta gaaggaccac
      601 agaatctcat atggagacaa gactcacagt ataactactc tacaaggaag taccacgccc
      661 tgttctctgt gggccctgtg acccccaacc agagatggat atgcagatgt tacagttatg
      721 acaggaacag accatatgtg tggtcacctc caagtgaatc cgtggagctc ctggtctcag
      781 gtaatctcca aaaaccaacc atcaaggctg aaccaagctc tgtgatcacc tccgaaagag
      841 caatgaccat ctggtgtcag gggaacctgg atgcagaagt atattttctg cataatgaga
      901 aaagccaaaa aacagaaagc acacagaccc tacagcagcc tgggaacaag ggcaagttct
      961 tcatcccttc tgtgacacaa caacatgcag ggcaatatcg ctgttattgt tacagctcag
     1021 ctggttggtc agagcccagt gacaccctgg agctggtggt gacaggaatc tatgaacact
     1081 atgaactcag actgtcagca ctgcccagca ctgtggtgac agcaggagga aacatgacac
     1141 tccactgtgc ctcacacagt cactatgata aattcattct catgaaggaa gataagaaat
     1201 tcaccaactc actggacaca gtttatatat cttctagtag acagtaccaa gccctgttta
     1261 ttataggacc cacaacccca acccacacag ggacattcag atgttacggt tactacaaga
     1321 atgcaccaca gctgtggtca gtacctagtg atctccaaca aatactcatc tcagggctgt
     1381 ccaagaagcc ctctctgctg actcaccaag gccatatcct ggaccctgga atgaccctca
     1441 ccctgcagtg tttctctgac atcaactatg acagatttgc tctgcacaag gtggggggag
     1501 ctgacatcat gcagcactct agccagcaga ctgacactgg cttctctatg gccaacttca
     1561 cactgggcta tgtgagtagc tccactggag gccaatacag atgctatggt gcacacaacc
     1621 tttcctctga gtggtcagcc tctagtgacc ccgtggacgt cctgatcctg atcccaggac
     1681 agctccctat cactccttcc ctcttagtga agcctaacca cacagtgcac tcaggagaga
     1741 ccgtgagcct gctgtgttgg tcaatggacc ctgtggagac tttcattctg tccaaggagg
     1801 gatcagccca gcaacccctg cgactaaaat cgaagtccca tgatcagcag tcccaggcag
     1861 aattctccat gagtgctgtg acctcccatc tctcaggcac ctacaggtgc tatggagctc
     1921 aagactcatc tttctacctc ttgtcatctg ccagttcccc tgtggagctc acagtctcag
     1981 gaaccattga atcctccacc tggtctccca aaaggcccat cccaccaatt cccacagaga
     2041 accaggatca cacaacagag aatctgatca ggatggggat ggcagtcgtg gtcctcatag
     2101 tcctttcgat tctagccact gaggcttggc gaagccatag acagacccac cctgcagctg
     2161 ggaactaatc taaagagaaa agaatgcatc tttcaatgtt ctacactctg ggaaataaat
     2221 ctgatgaccc aaagttttct gtcaaaagaa aaaaatactg ttgtggtatt gaggaactgt
     2281 tgtgatagaa tgtctaggaa gcaaaagttt ggaattcaga gggaagtgga agtgtcat
//
