LOCUS       XM_006539429            1776 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus paired-Ig-like receptor A12 (Pira12),
            transcript variant X2, mRNA.
ACCESSION   XM_006539429
VERSION     XM_006539429.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006539429.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..1776
                     /gene="Pira12"
                     /gene_synonym="Gm14548"
                     /note="paired-Ig-like receptor A12; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 4 long SRA reads, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 14 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:100038909"
                     /db_xref="MGI:MGI:3709645"
     CDS             76..1674
                     /gene="Pira12"
                     /gene_synonym="Gm14548"
                     /codon_start=1
                     /product="paired-Ig-like receptor A12 isoform X2"
                     /protein_id="XP_006539492.1"
                     /db_xref="GeneID:100038909"
                     /db_xref="MGI:MGI:3709645"
                     /translation="MSCTFTARLCLGLTLSLWIPVLTGSLPKPILRVQPHSVVSRRTK
                     VTFLCEETIGANEYHLYKDGKLYKTVTKNKQKPANKAEFSLSNVDLSNAGQYRCSYNT
                     QDESSGYSDPLELVVTGDYWTPSLSAQASPVVTSGGYVTLQCESWHNNHRFILTVEGP
                     QKLSWMQDSQYNNSTRKYHALFSVGPVTPNQRWIFRCYSYDRNRPYVWSPPSESVELL
                     VSGNLQKPTIKAEPGSVITSKRAMTIWCQGNLDAEVYFLHNEKSQKTQSTQTLQQPGN
                     KGKFFIPSVTQQHAGQYRCYCYSSAGWSQPSDTLELVVTGIYEYYEPRLSVLPSPVVT
                     AGGNMTLHCASDFHYDKFILTKEDKKFTSSLDTEHISSSRQYRALFIIGPTTPTHTGT
                     FRCYGYYKNAPQLWSVPSALQQILISGLSKKPSLLTHQGHILDPGMTLTLQCYSDINY
                     DRFALHKVGGADIMQHSSQQTDTGFSVANFTLGYVSSSTGGQYRCYGAHNLSSEWSAS
                     SEPLDILITGGISPATPATKIKVP"
ORIGIN      
        1 cctgtaccca atcccttcag aaaggctctg tagctcttcc ctcgagcaca gttgcagcca
       61 ctgaggggag atgccatgtc ctgcaccttc acagcccggc tctgccttgg actgactctg
      121 agcctctgga tcccagtgct gacagggtcc ctccctaagc ctatcctcag agtacagcca
      181 cactctgtgg tctccagaag gactaaggtg accttcttgt gtgaggagac aattggagcc
      241 aatgagtacc acctctataa agatggaaag ctatataaaa ccgtaacaaa gaacaaacag
      301 aagccagcaa acaaggctga attctcactc tcaaatgtag acctgagtaa tgcaggtcaa
      361 tatcgatgtt cctacaacac ccaggatgaa tcatcaggct acagtgaccc cctggagctg
      421 gtggtgacag gagactactg gacacccagc ctttcagccc aggccagccc tgtggtaact
      481 tcaggagggt atgtcaccct ccagtgtgag tcctggcaca acaatcacag gttcattctg
      541 actgtagaag gaccacagaa gctctcatgg atgcaagact cacaatataa caactctaca
      601 aggaagtacc acgccctgtt ctctgtgggc cctgtgaccc ccaaccagcg atggatattc
      661 agatgttaca gttatgacag gaacagacca tatgtgtggt cacctccaag tgaatccgtg
      721 gagctcctgg tctcaggtaa tctccaaaaa ccaaccatca aggctgaacc aggatctgtg
      781 atcacctcca aaagagcaat gaccatctgg tgtcagggga acctggatgc agaagtatat
      841 tttctgcata atgagaaaag ccaaaaaaca cagagcacac agaccctaca gcagcctggg
      901 aacaagggca agttcttcat cccttctgtg acacaacaac atgcagggca atatcgctgt
      961 tattgttaca gctcagctgg ttggtcacag cccagtgaca ccctggagct ggtggtgaca
     1021 ggaatctatg aatactatga acccaggctg tcagtactgc ccagccctgt ggtgacagca
     1081 ggagggaaca tgacactcca ctgtgcctca gactttcact acgataaatt cattctcacc
     1141 aaggaagata agaaattcac cagctcactg gacacagagc atatatcttc tagtagacag
     1201 taccgagccc tgtttattat aggacccaca accccaaccc acacagggac attcagatgt
     1261 tatggttact acaagaatgc cccacagctg tggtcagtac ctagtgctct tcaacaaata
     1321 ctcatctcag ggctgtccaa gaagccctct ctgctgactc accaaggcca tatcctggac
     1381 cctggaatga ccctcaccct gcagtgttac tctgacatca actatgacag atttgctctg
     1441 cacaaggtgg ggggagctga catcatgcag cactctagcc agcagactga cactggcttc
     1501 tctgtggcca acttcacact gggctatgtg agtagctcca ctggaggcca atacagatgc
     1561 tatggtgcac acaacctctc ctctgagtgg tcagcctcca gtgagcccct ggacatcctg
     1621 atcacaggag ggatcagccc agcaacccct gcgactaaaa tcaaagtccc atgatcagca
     1681 gtcccaggca gaattctcca tgagtgctgt gacctcccat ctctcaggca cctacaggtg
     1741 ctatggagct caagactcat ctttctacct cttgtc
//
