LOCUS       NM_001082532             692 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus phosphatidylinositol glycan anchor biosynthesis, class
            Y-like (Pigyl), mRNA.
ACCESSION   NM_001082532
VERSION     NM_001082532.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Murakami,Y., Siripanyaphinyo,U., Hong,Y., Tashima,Y., Maeda,Y. and
            Kinoshita,T.
  TITLE     The initial enzyme for glycosylphosphatidylinositol biosynthesis
            requires PIG-Y, a seventh component
  JOURNAL   Mol Biol Cell 16 (11), 5236-5246 (2005)
   PUBMED   16162815
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from BU558514.1, AK007367.1 and
            AI414555.1.
            
            Summary: This gene encodes a homolog of a human protein that
            functions in glycosylphosphatidylinositol biosynthesis. The human
            protein is expressed from an unusual locus that encodes two
            distinct proteins in upstream and downstream CDSes; however, in
            mouse these two proteins are expressed from distinct loci. The
            product of this locus is highly similar to the protein expressed
            from the human downstream CDS. A separate mouse locus on chromosome
            6 is orthologous to the human locus and encodes a protein similar
            to the human protein expressed from the upstream CDS. [provided by
            RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU525483.1, BU558514.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-20                BU558514.1         4-23
            21-685              AK007367.1         2-666
            686-692             AI414555.1         1-7                 c
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 8.46 cM"
     gene            1..692
                     /gene="Pigyl"
                     /gene_synonym="1810008A14Rik; PIG-Y; Pigy"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class Y-like"
                     /db_xref="GeneID:66268"
                     /db_xref="MGI:MGI:1913518"
     exon            1..68
                     /gene="Pigyl"
                     /gene_synonym="1810008A14Rik; PIG-Y; Pigy"
                     /inference="alignment:Splign:2.1.0"
     exon            69..692
                     /gene="Pigyl"
                     /gene_synonym="1810008A14Rik; PIG-Y; Pigy"
                     /inference="alignment:Splign:2.1.0"
     CDS             332..547
                     /gene="Pigyl"
                     /gene_synonym="1810008A14Rik; PIG-Y; Pigy"
                     /note="phosphatidylinositol-glycan biosynthesis class Y
                     protein"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit Y"
                     /protein_id="NP_001076001.1"
                     /db_xref="CCDS:CCDS52742.1"
                     /db_xref="GeneID:66268"
                     /db_xref="MGI:MGI:1913518"
                     /translation="MIRSLPTMTVLIPLVSLAGLLYSASVEEGFPEGCTSASSLCFYS
                     LLLPVTVPVYVFFHLWTWMGLKLFRHN"
     regulatory      647..652
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pigyl"
                     /gene_synonym="1810008A14Rik; PIG-Y; Pigy"
                     /note="hexamer: AATAAA"
     polyA_site      676
                     /gene="Pigyl"
                     /gene_synonym="1810008A14Rik; PIG-Y; Pigy"
                     /note="major polyA site"
ORIGIN      
        1 gccttcgtgg ggcggtgact gtcaccgcca ggcgccgaag ggaccggact cctacaggcc
       61 tgcaaacgtt aaaagacctc tcgcctgcgc tgcgagggac acaggtggtg tctgcagtcg
      121 ctggtaaccg ctgcgtgtga cgcggaggct gaggagccgg caccttcggc ctgggacccc
      181 tggactttct gcgtgccctt gggaagcatg cctgggtgaa tgaggagtcg ggacaagggg
      241 aagataagac aagagcgcac ccgcacgaga acagaacttt tcaaacaact gagttttctt
      301 gagacagtta accttttaag aagggaggaa gatgatccgg tccctgccca ccatgaccgt
      361 cctcatccca ctggtctcgc tggcaggcct gctctactcc gcctccgtgg aggaaggctt
      421 cccagagggc tgcaccagcg ccagcagcct gtgcttctac agcttgctct tgccggtcac
      481 cgtgcctgtg tacgtgttct tccatctgtg gacatggatg ggcctgaagc tcttcagaca
      541 taactagggg agccgaggcc cctcctgctc gggctgcctg cggagtgggg catggccgga
      601 ggttcctggc tgttgcagat tcttttgtag ctgaaaaata cttttcaata aaatgtctta
      661 tgggagagga acacgaccag ccttcatcca aa
//
