LOCUS       XM_030253468            6478 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus phosphatidylinositol glycan anchor
            biosynthesis, class V (Pigv), transcript variant X1, mRNA.
ACCESSION   XM_030253468
VERSION     XM_030253468.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030253468.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6478
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..6478
                     /gene="Pigv"
                     /gene_synonym="B330013B03; D430024F16Rik"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class V; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 8 ESTs, 303 long SRA
                     reads, 1 Protein, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments, including 39 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:230801"
                     /db_xref="MGI:MGI:2442480"
     CDS             2535..3728
                     /gene="Pigv"
                     /gene_synonym="B330013B03; D430024F16Rik"
                     /codon_start=1
                     /product="GPI mannosyltransferase 2 isoform X1"
                     /protein_id="XP_030109328.1"
                     /db_xref="GeneID:230801"
                     /db_xref="MGI:MGI:2442480"
                     /translation="MGTELLRPLQGLLSQRSCLLVSVALLNLLFSVLAAVALHDLGCL
                     VLHCPRQALCAALLFCISPANVFLAAGYSEALFAFLTFSAMGQLERGRGWASGLLFAL
                     AAGVRSNGLVSLGFLLHSQCRGFCSSLAVLSPWKPLVKLMASVCLSVLIVSLPFALFQ
                     YRAYIQFCSPGSAPSIPEPLLQLAADKGYRLAGENAPPWCSWDLPLIYNYIQDVYWNV
                     GLLRYYELKQVPNFLLATPVTVLVVWATWTYVTTHPWLCLTLGLQRTKDRENPEKPHR
                     GFLSPKVFVYLVHAAALLVFGGLCMHVQVLTRFLASSTPIMYWFPAHLLQDQEPLLRC
                     VDTEPGKLPQEKSPPGQKAPRNCLMKLFYDWKRCSPVTRCVLVYFLTYWLLGLILHCN
                     FLPWT"
ORIGIN      
        1 tctgtaggag aagaagccag aaaatgaaac gggaaacagc agaagagaag ggggttgggc
       61 ggctgggaag ggaagggaag gaaggagaga ttgcagccaa gtgcgactga agatctagtc
      121 aaagttctac ctcctaagga agggtgtttc aacaaacact ctcacttctc acaaaaggac
      181 ccctgccttt tttacaagca gattctgcag ggattcttta ttggacagac agaacctcga
      241 gcttgcatgc cattttcccc tgtgaattca cgaagcaagg atggtttctt taaggtcagg
      301 gtgctgcgaa gactgtaaga aagtcaagtc acaacctcgg gccctagtca caagtgtgcc
      361 tagagaggca ctgacatttc actcacagga ctggcaacaa atgctttcgg ggggcggggg
      421 ggggaggaaa aatgactttg gaaactcctg ttttctcttt accagtcatt aaattataca
      481 ttatccacct tacacgcaaa catccaaggg gcagttgaca tcccagggcc tgagatgata
      541 gacagacaca gcttctggcc cccaccgaac tgatgaaggc tagttttttt tgtttttttt
      601 gttttttttt tttgcttgga gagatagaga cccatctctt tgttcccacc cacatttgtg
      661 gctgttgcag aagataaacc cctccctcag ccagggctgt ggccagaggt taacctagac
      721 ccaagctacg tttgagagga cagataactg aaaccacaca aggctttgga atcctgagaa
      781 acgagaaatc taccaacgga gaaggattta ctatctgttt cctctaaggc gggtgcaaag
      841 ttgttctaac agtttccgtt agttacaggg gtaccaactg gccgctcctc cccaacaggc
      901 ggttttgttc aattagcttc cttttttttt tttttttttt ttttcttttt cttttttttg
      961 gcgccagttc ctgcgacaga aactgcttga gggagaatcc tcgggggtgt tctctgaggt
     1021 ttccttcctc gtcccataca gtcatctgag gtgggacaga ggactgtcgc agggcagagg
     1081 tccttcattg ccaggagggg aaaggcaggg ggaattcccc tactttcttc tcatccagtt
     1141 gcagggtacc gctgcttgcc acaaaaaccc caagaaggct ttcttttgcc tattcatatt
     1201 gtctatcgtg tgccaggtcc tgtgctgagc tggggtggcg gaacaccgag agaacgcgtg
     1261 gctctggggc agcgcccggg tccagcctcg gctcacaccg ggaagtcaga ggctgctcac
     1321 ggcaggggac tggggtgaga gccccgaccc gggagcgcag cgcccgcgca caaactgctg
     1381 gcgagtcaag aggcctactc ctcaggtgtc accacgccgg gaaggtgcga ctcaccgccg
     1441 ccgcctcggc ccccgcccta gctggggtca acatggccgc cgaggagggg ggcggggcgc
     1501 tccgagtccg ggcaggagcg gggcggggcc gccgtcggcc gagccggcgc gcaggcgcgg
     1561 cacggacggg acccggatgg aggcgctgaa gttggagctc cgcgggggtg gtctggacgc
     1621 gcgggcgcgg aggatccggc gccagctctg caactctgga gtcctccggg gagggaagct
     1681 gtcaaacgca ggccgagaga aattaggcgg aggctgtaga gaagcgagga gccccgcccc
     1741 tccgccatag cagcctccgg cgccgcctct tcctttgcag cctccggccc tcgtctgctt
     1801 ccggccccgt tgcctggccc ggccccgcga ttcccccggg acgaagccct gggccgtggc
     1861 tcccttggga atttagaagc cggaggaagc tcagtcctgg tggtgagaga gaggatggga
     1921 ctcctggacc catcccagaa agaggtgctg agattcgcag taaactgccg catcctgact
     1981 ctagtgctac aggttctgct gactttgggc attaaagagt cttcatcttg gtggcctgta
     2041 ctgttacctg tgattgtcac cccatcccat ttcttttcac tggagtggcc tgatgaggaa
     2101 actgacaaga agagaaagaa cctttaagtg agctgtgctc ttgtcgctgg gctggggagc
     2161 ctgactcagt gatggctgag ccagcaccag ctgagctcct ggcaggagca gaggagcaag
     2221 tcagcagctg ggaagggcag ccagggcagc tgggctctca ggcactgtga gcgtggaaac
     2281 actctatttc cccaaacccc tgaagttcag ccaccaaaat tatagcactc ttcaacctca
     2341 tcatcccaga tcaccacgca gatgcctttt gccctccccg cctcgccccc tcgggctctg
     2401 cggatcagct tgtggaaggt cttctgggtg gtctgtctcg atgggatgct gaacacttcc
     2461 tgtttatcgc tgagcacggc tacctttatg agcacaactt tgccttcttc cctggctttc
     2521 ccttggccct gctgatgggg actgagctgc tgagaccctt gcagggcctc ttgagccagc
     2581 gcagttgcct gctggtctca gtagcacttc tcaacttgct gttctccgtg ctggctgcag
     2641 tggcactcca tgacttgggt tgtctggttc tgcactgtcc tcggcaggcc ttgtgtgcag
     2701 cgttgctctt ctgcatcagt cctgccaacg ttttcctggc agccggctac tcagaggctt
     2761 tgtttgcctt cctgacgttc agcgccatgg ggcagctgga gaggggccgt ggctgggcta
     2821 gtgggctgct ctttgctctt gctgctgggg tgcgctccaa tgggctggtg agccttggct
     2881 tcctcctgca ctcccagtgc agaggctttt gttcctctct ggcggtgctg agcccctgga
     2941 agcccctcgt gaagctgatg gcctctgtgt gcttgtcagt gctcatagtc agccttccct
     3001 tcgccctctt tcagtatcgt gcctacatcc agttctgctc accaggctca gccccctcca
     3061 tccctgagcc cttgctgcag ctagctgccg acaaaggcta ccggcttgca ggagaaaatg
     3121 cacccccatg gtgctcctgg gaccttcctc taatatacaa ctatattcag gatgtctact
     3181 ggaatgttgg tcttctgcga tactatgagc tcaaacaggt gcccaatttc ctactagcta
     3241 caccagtgac agtactggtt gtgtgggcaa cctggacata tgtgaccacc cacccttggc
     3301 tctgccttac acttgggctg caaagaacca aggacaggga gaacccggag aagccccacc
     3361 gtggcttcct gagtccgaag gtgtttgtgt acctggtcca cgctgcagca ctgctggtct
     3421 ttggaggtct gtgcatgcat gtccaggttc tcacgcggtt tttggcctct tccactccta
     3481 tcatgtactg gtttccagct cacctgcttc aggatcaaga accgctgctg aggtgtgtgg
     3541 acacagagcc tgggaagctt cctcaggaga agtccccacc aggacagaag gcccccagaa
     3601 actgtctcat gaaactcttc tacgattgga agagatgctc tccagtcaca agatgcgttc
     3661 tggtctactt cctgacctac tggcttctgg gactaattct ccattgcaac ttcctgcctt
     3721 ggacttgacc tggagtgtca aggaatgaaa gctctaagac gacaccctgg ctgggacagc
     3781 ccgcacactc cggagagcac tgtgcagtag gatctctggg tctctctggg ggccagctaa
     3841 gaagggaaaa tgggagcaca ggcgcccctt ctcatcctgg gcggggcagg tgtaggggag
     3901 taacttcagt gctcagtgca ggggtctcag atctccctag tccacaagta ctaggcaatc
     3961 ttaaacctac tactgatcca cgtgtaagtc tgtcttcttg ttttttgaga gaaggttggt
     4021 ttctctacat tgccctggtt gtcctggaac tcactctgta gaccaagttt atgtagacca
     4081 ggctggcctt gaactcagag attcatctgc ctctgcctct tgagtactag gcccaccact
     4141 gagtgtgagc cacccctgcc tggcctggtg gataaattta aatgtttgat caaagcacag
     4201 gccaacagcc tgccccactc aggatggtgg agtcagtgca gtgtagtgac agaaggaaga
     4261 ggggacagac agcctgctct aagtgagagg tttctgaagg tggttgtttt cttttttttt
     4321 ttttttaaag atgtattata ttatatatga gtacactagc tgtcttcaga cacaccagaa
     4381 gagggcatca gatcccattg cagatggttg tgagccacca tgtggctgct gggaattgaa
     4441 ctcaggacct ctggaagagc agccagtgct cttaaccact gagccatctc tccagctccc
     4501 tgaagttttc tttatgatac tggtgtgtgt gtgtctgtgt ctatcctaca gactgtgaaa
     4561 atctaaatac tccttttgca atgaattacc tttttctgga ggaggggtag tcaggggagc
     4621 taagacaagg tccctctgtg taactctgac tgtcctagaa cttgcttgct atgtagatct
     4681 ggctggtttt gaactcagag atcctcctac ctctgccgaa ctagtttcta taaattatag
     4741 agggttgagg ctagaactcc gtagtaaagc acacgaggcc ctaatttcag taataaacac
     4801 cacttggatc agagcacagg gtctgaatct tggctcccat tcctcacttt ccagctgtat
     4861 gatctaaagc caccttcaga gcttttgcct tctctgaaat taaggaggag acttcttccc
     4921 tggggtgtga tttaggcctt aaatcttgag gctaccttaa acaaaagata aatggaggct
     4981 cacaagtggt ctaatgggaa agtcctcctt tgatcaattg gaaacagcct cccccccacc
     5041 tctgggaaca actcggaata gaagctgtcg tggagagtaa tgacacctgg tggaaaaggg
     5101 taacccaggg tgactggttt tccattctca aagatcacac ttgcatgagt cagaggcacc
     5161 taccccacag ccttgatggg ggaaccttgt agctaagtca gtccaaggtt gtctactgta
     5221 gcatctgccc tgcttcctgg ctccctgtgg ttactaagag taaccctgcc cctgaggaag
     5281 gatgactcca ggatgctgag gcttgaggtg agcttgaggg cagctacaga ataagaccct
     5341 gtataaatga aagacagtgt ccctgctgcg cagcgtttgt gcattcttga gccaggtaac
     5401 tttggctcgg tgtcaccatc cttactcccc attgggccaa aaattccaat aagcagcatt
     5461 cttcaaaaca gatggcagtc agcagtggct tctggaaagc tcggagttgg aatttggaca
     5521 cactccctcc gaccgtgaca gaaagctcaa cttgccagct gaagggaagc tcctggccca
     5581 ggcccagcac cctctgtggg agcctccagc cagcctggcc aacgagcatt cccacccagc
     5641 accacagcac tagcacagcc aagcatttgg tccagagtca aatgctactg aaaatgtaca
     5701 cacagattgg ggcagccctc tgccttctgc caagacacca agtgcccttc ttggcaaaag
     5761 acaacacctc tcccctagtg tgtccctcca gctggcagac tgcagcctct tccccagcag
     5821 ctgcaaatcc taggactccc cctccccctc caaaaaaaaa aaagtgcgtg ggaggagccg
     5881 ggatcctttg gtctccctct ctgctccact ttgcctccgt ttggagggta accagaagtg
     5941 attgttcctc tcctgggaga ggtgactcac cccctacaga gcagcttcag tctcccctgt
     6001 tttgtcccta gagccatcac tgaagaaacc ctacacctgg gcaccccggc taggtaagca
     6061 cacctggaga aggccgggct tctggcctgg gaggctcacg gctcagcttg taaggagcgg
     6121 gctgacttta tgaccagcag ctgtcccttt accggcctat taacagtctt taatagtctg
     6181 aaggaggacc gtgaagggcc caaggccgga gcttcctgtt tccccgaggt ctaagaatgc
     6241 cacagctggg tggggcggcc acggtttcag agaaaagtca tttccttcca agaccctgct
     6301 aaaatacaaa ccagacactc tgaggaccca gaagtggatg tctttttgtt ctttaatgga
     6361 ggtgggaaaa ggggaagctt tggcgggtct ctagtagtcc cactggggtg gggcagcgga
     6421 agtctgggtc taaaaatgta aagtgtggag gcttaagttt ttaaaaggat tcttttca
//
