LOCUS       XM_030249502            3667 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus phosphatidylinositol glycan anchor
            biosynthesis, class Q (Pigq), transcript variant X3, mRNA.
ACCESSION   XM_030249502
VERSION     XM_030249502.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030249502.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3667
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..3667
                     /gene="Pigq"
                     /gene_synonym="Gpi1; Gpi1h; Gpi1p; Gpih"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class Q; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 24 mRNAs, 25 ESTs, 972 long SRA
                     reads, 6 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments, including 8 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:14755"
                     /db_xref="MGI:MGI:1333114"
     CDS             742..2487
                     /gene="Pigq"
                     /gene_synonym="Gpi1; Gpi1h; Gpi1p; Gpih"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit Q isoform X2"
                     /protein_id="XP_030105362.1"
                     /db_xref="GeneID:14755"
                     /db_xref="MGI:MGI:1333114"
                     /translation="MVLKVFFPTCCASADSGLLVGRWVPGQSSAVILAVVHFPFIPIQ
                     VKELLAQVQKASQVPVAVLGTWCHRQQEPQESLGNFLEGLGTIFSHDPWLQLCRERGT
                     RLWSCKATYPQMSNPLDMHPEEQVMLIFYDQRKLLLSWLHPPPVLPACQMGDTTASTG
                     GLADIFDTVARSEVLFRNDQFDERPVRLSHWQSEGVEASILVELAKRASGPVCLLLAS
                     LLSLISAASACRLWKLWPLSFIRSKLSTCEQLHHRLKHLSFIFSTEKAQNPMQLMRKA
                     NMLVSVLLDVALGLLLLSWLHSNNRIGQLANALVPVADRVAEELQHLLQWLMGAPAGL
                     KMNRALDQVLGRFFLYHIHLWISYIHLMSPFIEHILWHVGLSACLGLTVALSIFSDII
                     ALLTFHIYCFYVYGARLYCLKIYGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQLFIGT
                     LLFTILVFLLPTTALYYLVFTLLRLLVITVQGLIHLLVDLINSLPLYSLGLRLCRPYR
                     LAAGVKFRVLEKEAGRPLRLLMQINPLSYNHVMHIYRLPRCGCHPKHSWGTLCRKLVF
                     GELIYPWRQREDKQD"
ORIGIN      
        1 tttaaagatt tatttattta ttacatgtaa gcacaccagg cacaccagaa gagggcatca
       61 gatcagatca gatctcactc attagaggtg gttgtgagcc accttgtggt tgctgggatt
      121 tgaactcagg acctttggaa gagcagtcag tgctcttaac cgctgagcca tctctccagc
      181 ccctgtggtg gtgcccctgt ggtggttctt aatgctcaca ccaagagcct gagaggtcag
      241 gagggctgct gttccctcac agaaaatgcg ttgacattct ctcatggaga gaaatactgc
      301 tctgctggga gccccatctt ggggtgtctg ccaaggattc cagagaaaga ggagtactac
      361 ccagaggtac ctcagctctg aaggcaaagg tgtcctggca gtctggagcc aaggaatagc
      421 aagcacaaag tcacaccaca caacaagcct catacaagag atttattggg aaagacacaa
      481 gatggcagct acctctgctt gggctagaag tagcagaaaa ctgagtgaga agcaaactta
      541 tataggattt cttggaggtt ggaggaccaa gttttccagg atgggaactg gtggagtttc
      601 aaatcctgac ttaggcggag ctcgggattg atgagtttgt ggcagcagca acaggaggac
      661 atggtccgtg tcacaggagg agcggctcct ttaagcaggc cttacccgca gccttaggac
      721 cagtgatcta gggcccccag catggtgctc aaggtcttct tccccacgtg ctgtgcctcg
      781 gcagacagtg gcctgttagt gggacgatgg gttccaggac agagcagtgc tgtgatcctg
      841 gccgtggtgc actttccctt catccccatc caagtcaagg agctcctggc ccaggtgcag
      901 aaggccagtc aagtaccagt ggctgtgcta gggacctggt gccaccgtca gcaggaaccg
      961 caggagagcc tggggaattt cctggagggc ctgggcacca tcttctccca tgacccctgg
     1021 ttgcagctct gccgggagag gggtaccaga ctctggagct gcaaggccac ttacccgcag
     1081 atgtctaacc ctctggacat gcaccccgaa gagcaggtca tgctcatctt ctatgatcag
     1141 cgcaagctgc tgctctcctg gttgcatccg cctccagtcc tgcctgcctg ccagatggga
     1201 gacaccacag ccagcaccgg aggcctagct gacatctttg acacagtggc acgcagcgag
     1261 gtgctcttcc gaaatgacca atttgatgag agacccgtac gcctgagcca ctggcaatca
     1321 gagggagtgg aggccagcat acttgtggag ttggcaaagc gggcctctgg gcctgtctgc
     1381 ctgctgctgg cttctctgtt gtccctgatc tcagcagcta gtgcttgccg gctatggaag
     1441 ctgtggccac tttccttcat cagaagcaag ctctccactt gtgagcagct ccatcaccgg
     1501 ctgaagcacc tctccttcat cttcagcacg gagaaagccc agaatcccat gcagctgatg
     1561 aggaaggcca acatgctggt ttctgtgcta ctggatgtgg cccttggctt gctgctgctc
     1621 tcttggctcc acagcaataa ccgaattgga cagctggcca atgccctggt ccctgtggct
     1681 gatcgcgtgg ctgaggagct ccagcatctg ctgcagtggc tgatgggtgc tcctgctggg
     1741 ctcaagatga atcgggcact ggatcaggtg ctaggccgct ttttcctgta ccacatccat
     1801 ctgtggataa gctatatcca ccttatgtcc ccctttattg agcatatcct gtggcatgtg
     1861 ggactctcag cctgccttgg actgactgtt gctctgtcca tcttttcgga tatcatcgcc
     1921 cttctcacct tccacatcta ttgcttctat gtctacggtg ccaggctgta ctgcctgaag
     1981 atctatggcc tttcctctct ctggcgtctg ttccggggga agaagtggaa tgttctgcgc
     2041 cagcgagtgg attcttgttc ctatgacctt gaccagctct tcattgggac cttgctcttc
     2101 accatcctgg tcttcttgct acccaccacc gctctgtact acctggtatt caccctgctc
     2161 cggctcctgg tgatcactgt gcaaggctta atccatctac ttgtagacct catcaattcc
     2221 ctgccactat actcccttgg ccttcgactc tgccgaccct acaggctggc agctggtgtg
     2281 aagttcagag ttctggaaaa ggaggcaggc agacccctcc gcctcctgat gcagataaac
     2341 cccctgtcct ataaccatgt gatgcacatc taccgtctgc ctcgctgtgg ctgccatccc
     2401 aagcactcct ggggtaccct gtgccgaaag ctggtcttcg gagagctcat ctacccctgg
     2461 aggcagagag aggacaaaca ggactgagga gctggacaca gcctacccat agctactgca
     2521 caaccatcac gcctcctctc tgccaggaca gcactgacca cggggtcatc tcaggtccca
     2581 caagggccaa ccaaacactc tgtgtgctga atgtaggcag gccttaccct tgagttacta
     2641 ctttgctctc ggaccctgcc agcttcagtc ctgcactcta tctagcacag tggttctcaa
     2701 ccgtcccaaa gctgaccctt taatacagtt cctcatgttg tggtgacccc aaccataaaa
     2761 ttatattcat tactacttca ttactgttaa ttttgctact gctatgaatc atgatataat
     2821 ataaatatct gtgttttctg acagtcatag gtgaaccctg tgaaagtgtc atatgacacc
     2881 caccccaaag ggttgagaac cactgctcta gtatcaccta tgtagggacc cacatggttt
     2941 ttgtagtcat tacagtgagc ctgattccta ggagttcccg gaccccgtgg gatatgctgg
     3001 caggtgctct tggctgcttt attgggtggg agcactcctg ggcacctggt gtacttcata
     3061 agcctccgca gaacatttcc attgggaaac aggcagctgc tgatccctta gcccctcgaa
     3121 ctaatccctc accctgtact tcattgggct tacttgctac tctggagatt gctttgtgaa
     3181 gttgctgtta ataggccttt gggtaccctt tgcttgaagt tatatcaact gaggtgattg
     3241 gatacctgcc aacctggcta gtgctccatg tatgaatagg ccctttggca aaatattcta
     3301 tgttctctta tagactcctt atgggaccag atagcttcct tctggacagg cacttcatgg
     3361 ctcattgtgt gaatgatctt ggggtggtga aatggccagg gttggttccc taacacttag
     3421 tgggacccca tgtgagctag tccctagggg gcaggaaacc tcactgcctg aattgtctac
     3481 tgtgggcagg aggggacagc cggcccagcc tgtctttcag gggcacttgg gactattgac
     3541 attggtctgt ctgtgcctgc ttcctcttgc tataggtcac agccactctt aagcagccag
     3601 tggagggttt tggtgaagat gaatcctgat cctgtgatga caataaaaat ctcatgaatc
     3661 tggagta
//
