LOCUS       XM_036156768            1388 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus phosphatidylinositol glycan anchor
            biosynthesis, class L (Pigl), transcript variant X1, mRNA.
ACCESSION   XM_036156768
VERSION     XM_036156768.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..1388
                     /gene="Pigl"
                     /gene_synonym="Gm737"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class L; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, 32 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 19 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:327942"
                     /db_xref="MGI:MGI:2681271"
     CDS             45..449
                     /gene="Pigl"
                     /gene_synonym="Gm737"
                     /codon_start=1
                     /product="N-acetylglucosaminyl-phosphatidylinositol
                     de-N-acetylase isoform X1"
                     /protein_id="XP_036012661.1"
                     /db_xref="GeneID:327942"
                     /db_xref="MGI:MGI:2681271"
                     /translation="MISIPWSTEFTILSLVLVAFCQFDTSWSHLGRGNVNQEKASIKM
                     TCRALHSGGKLPKGCSVLTLQSVNALRKYAFLLDLPWTLLSPQDVLFVLTSKEVAQAK
                     KAMSCHRSQLLWFRYLYVLFSRYMRINSLRFL"
ORIGIN      
        1 gaacgcagga agtaggtggg tggaggaatg tcgctatctg ttttatgatt agcatacctt
       61 ggagcactga gtttactatt ctttcacttg tacttgtggc tttttgtcag tttgacacaa
      121 gctggagtca tttgggaaga gggaatgtca atcaagaaaa agcctccatc aaaatgacct
      181 gtagggccct gcactcagga gggaagctgc ctaaagggtg ctccgtgctc acgctccagt
      241 ctgtgaacgc gcttcggaag tacgccttcc tcctggatct gccctggact ctgctgtcac
      301 cccaggatgt tctctttgtg ctcaccagca aagaagtggc acaggccaag aaagccatgt
      361 cctgccaccg cagccagctc ctctggttcc gatacctcta cgtcctcttc tccagataca
      421 tgagaatcaa ctcactgcgg ttcctctgaa gccttggaga gtggtcagac cctcagaaca
      481 agagggagaa gcagagcaag aagtcgtctg gccaggcttt gggctgattt acctgcctga
      541 cccagggaaa ccccagcaaa gcagcgtctg ccaaacaggg accacatgaa ggatgggtca
      601 ccccaaccca gcttcctctt ctgaggaaaa cctgccaaaa ccaagcctac accaacacaa
      661 tagtagccac cccactaatt taccaatagt ttgcatgata acagagtttg caccagacat
      721 ccagcaaagc ctagggaagt tgtctttacc acaaatgtgt gtaaatgtgc catagaacta
      781 gttcacaggt gtgatgttta catggtttcc agaccaggct gttttggtca gtcttctgtt
      841 cctgtagctg aaacaccgct cacagggcat ctgcagagct gcggttttct tggatcacag
      901 ttctgaagcc tgtgaagtcc aagagcatag cagcctctac atgaccgcgg tgaggggcat
      961 cccgctgcat ctcaaaggca aaggcagtca gtcagaaaga gcccatgagc caaagagttc
     1021 ctttagaaca aagccacgcc tacaacaaat aaccctgtca cttccaaaag gcctcaccct
     1081 aaacactggg gctctgaaga cacatgaatt ccaggggaca cagccaaacc ctagcacagg
     1141 ttcatccaga cacccctctc ccctcccccc acagtcttca ggtgcttcaa actattcctt
     1201 gggtttttat ttgtgtcccc ttatgagaac tttacagtct agagaagctg taccttatca
     1261 tcatggtggt tctgctgtgt gtggagatga tcctgtgggt ccccccttta aggagccaat
     1321 aaacaccttg gttctctgcc ttttcacagt aggagctggg cccacacctt tatatatata
     1381 cttttttt
//
