LOCUS       NM_001310689            4373 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus phosphatidylinositol glycan anchor biosynthesis, class
            G (Pigg), transcript variant 1, mRNA.
ACCESSION   NM_001310689 XM_006535065
VERSION     NM_001310689.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4373)
  AUTHORS   Shishioh N, Hong Y, Ohishi K, Ashida H, Maeda Y and Kinoshita T.
  TITLE     GPI7 is the second partner of PIG-F and involved in modification of
            glycosylphosphatidylinositol
  JOURNAL   J Biol Chem 280 (10), 9728-9734 (2005)
   PUBMED   15632136
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC124107.8.
            
            On Jun 20, 2019 this sequence version replaced NM_001310689.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longest isoform (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660813.240472.1,
                                           SRR1660825.65351.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-266               AC124107.8         109219-109484       c
            267-472             AC124107.8         108133-108338       c
            473-682             AC124107.8         104825-105034       c
            683-871             AC124107.8         103284-103472       c
            872-1013            AC124107.8         102260-102401       c
            1014-1226           AC124107.8         95268-95480         c
            1227-1444           AC124107.8         90105-90322         c
            1445-1726           AC124107.8         89332-89613         c
            1727-2184           AC124107.8         85736-86193         c
            2185-2376           AC124107.8         83551-83742         c
            2377-2686           AC124107.8         80193-80502         c
            2687-2850           AC124107.8         77910-78073         c
            2851-4373           AC124107.8         72938-74460         c
FEATURES             Location/Qualifiers
     source          1..4373
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 52.9 cM"
     gene            1..4373
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class G"
                     /db_xref="GeneID:433931"
                     /db_xref="MGI:MGI:3576484"
     exon            1..266
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..3064
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /note="isoform 1 is encoded by transcript variant 1; GPI
                     ethanolamine phosphate transferase 2"
                     /codon_start=1
                     /product="GPI ethanolamine phosphate transferase 2 isoform
                     1"
                     /protein_id="NP_001297618.1"
                     /db_xref="CCDS:CCDS80354.1"
                     /db_xref="GeneID:433931"
                     /db_xref="MGI:MGI:3576484"
                     /translation="MRLGSGAFAASCVAIEVIGVAIFIRGFFPAPVRSSARPEHDAET
                     PAPEPVAGVRSNWTKLPPPLFSKVVIVLIDALRDDFVFGSKGVKYMPYTTYLVEKGAS
                     HSFVAEAKPPTVTMPRIKALMTGSLPGFVDVIRNLNSPVLLEDNVLRQAKAAGKRIIF
                     YGDETWVKLFPKHFVEYDGTTSFFVSDYIEVDKNVTRHLDKVLKRGDWDVLILHYLGL
                     DHIGHISGPNSPLIGHKLSEMDSVLMKIHTSLLSKDRETLLPSLLVLCGDHGMSETGS
                     HGASSTEEVSTPLLLISSAFERKPGDIRHPKHVQQTDLAATLAIGLGLPIPKDSVGSL
                     LFPVIEGKPMREQLRFLHLNTLQLSKLLQENVPSYEKDPGFEQFKMAEKLHGNWVKLH
                     LEENHSDILLGLGTKVLRHYLGALKTLSLSLSTQVAQYDMYSMAVGTLIVLEVLALFL
                     LSTPHVLCRKAELDVPLLSPVFSLLFYLVFLVLSAIHVLVCTSSESSCYLCSLSWLAV
                     GAVMLLVSALFCAILSALIRMVIDSTLLKKNAADASSGWSEVNLLLLLGTVGHVLSLG
                     ASSFVEEEHQTWYFLINTLCLALSQETCRSYFLGDECEPQRHSHVEQQCVNLLACPLQ
                     DSTSYNTPESGTAGKRVSLLEAQGSCKWWTVLASPWLVLLCCRLLRSLNQTGVQGAHR
                     PDFSHWLTSSDHKVQLSGLAALSLVVIFMLVQRRCSLVSKVALALGLLGVFCYRAAIG
                     IVQFPWQSDNKGISKGIIEARFVYVFVLGILFTGTKDLLKAQVIATDFKTKTVGLWEM
                     HSGLVLLAALLLRPHNLPVLAFSLLIQTVMTKFIWKPLRHDAAEITVMHYWFGQAFFY
                     FQGNSNNIATIDISAGFVGLDTYMEVPATFLTVFGTYVGPVLWASHLVYFLSSEGNNS
                     ALSRSCFCYALICSVPVATYIVLVTSLRYHLFIWSVFSPKLLYEGMHLLITAAICAVF
                     TATNQTRHRRA"
     exon            267..472
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            473..682
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            683..871
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            872..1013
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            1014..1226
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            1227..1444
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            1445..1726
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            1727..2184
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            2185..2376
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            2377..2686
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            2687..2850
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
     exon            2851..4373
                     /gene="Pigg"
                     /gene_synonym="Gpi7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggcaggct gggagggagc tcttgacagt ccgggtgtgg gctctgggtg cgggtttgca
       61 acgcccgctg ttacactaag tttcgggccg accggcccag cggcagggca gaatgcggct
      121 gggctccggg gccttcgctg ccagctgcgt agcgattgag gtgatcgggg tcgcgatatt
      181 tattcgggga ttcttcccag ctcctgttcg ttcctctgct agaccagagc acgatgcaga
      241 gaccccagcg cccgaacccg tagcaggagt ccgttcgaac tggaccaagc tgccaccacc
      301 tctcttcagt aaagtggtta ttgtgttgat agatgcatta agagatgatt ttgtgtttgg
      361 gtcgaaaggt gtgaagtata tgccctacac aacgtatctg gtagaaaaag gagcatctca
      421 tagctttgtg gctgaggcaa agccacccac agttactatg cctcgaatca aggcattgat
      481 gacaggaagt ctccctggct ttgttgatgt catcaggaat ctcaattctc ctgtgctcct
      541 agaagacaat gtgttaagac aggcaaaagc tgctgggaaa agaattatct tttatggaga
      601 tgaaacatgg gttaaattat tcccaaagca ctttgtggaa tatgatggga caacatcatt
      661 ctttgtgtca gattatatag aggtggataa aaatgtcaca aggcatttgg acaaagtatt
      721 aaaaagagga gactgggatg tgttaatcct tcactatcta ggactggatc acattggcca
      781 catttctggg cccaacagcc ccctgattgg tcacaagctc agcgaaatgg acagtgtgct
      841 gatgaagatc cacacttcac tgctgtcgaa ggacagagag actctcttac ccagtttgct
      901 ggttctctgt ggtgaccatg gaatgtctga gactgggagc catggggcct cttccactga
      961 ggaagtgagc acacctctgc tcctaatcag ctctgcattt gaaagaaaac ctggggatat
     1021 tcgacacccg aagcatgtcc agcagactga cttggctgca acactggcaa taggacttgg
     1081 tttgccaatt cctaaagaca gtgtaggaag cctcttattc ccagttatag agggaaaacc
     1141 gatgagagaa caactgagat ttttacattt aaacacatta cagcttagca aactattgca
     1201 agaaaatgta ccatcctatg aaaaagatcc tggatttgag caatttaaaa tggcagaaaa
     1261 gttacatgga aactgggtca aactgcactt ggaggaaaac cattcagaca ttctgcttgg
     1321 cctggggacc aaagtactca ggcattacct gggtgccctg aagaccctga gtctgtccct
     1381 gagcacacaa gtggctcaat atgacatgta ctccatggca gtgggaacac tcatagtttt
     1441 ggaggttctc gccctgttcc tccttagcac tccacatgtg ctgtgcagaa aggctgagct
     1501 ggatgttcct ctgttgtcgc ctgtgttttc gctgctcttt tacttggtgt ttttggttct
     1561 ttcggccatt catgtcctgg tgtgcacctc atctgagagc tcgtgctacc tctgtagcct
     1621 ctcgtggctg gcagtggggg ctgtgatgct acttgtgtct gcgctgttct gtgcaatttt
     1681 gtctgctctt atcaggatgg tcattgacag cactctgctg aagaagaatg cagctgatgc
     1741 cagctcaggg tggtcagagg tgaacctcct tcttcttctg ggcacagtgg gccatgttct
     1801 gagcctggga gccagcagct tcgtggagga agagcaccag acgtggtatt ttcttattaa
     1861 tactctgtgc ctggctctga gccaggaaac ctgtaggagt tactttctgg gagatgaatg
     1921 tgaaccccag cgtcactccc atgtggaaca acaatgtgtg aatctccttg cctgtcctct
     1981 gcaggacagc acaagctaca atacccctga gtctggcacg gcaggtaaac gggtctccct
     2041 tctggaagca caaggaagct gcaaatggtg gacagtgctg gcaagtccat ggctggtgct
     2101 gctctgctgt cggctgctgc ggtccttgaa ccagacaggg gtgcagggag cgcatcgccc
     2161 cgactttagc cactggctta ccagctctga ccacaaagta cagctttcag gcctggctgc
     2221 cctctccctg gttgtaatct tcatgttagt tcaaaggagg tgctcccttg tatccaaggt
     2281 ggcccttgca ctggggctgc tgggtgtctt ctgctacagg gcggccattg ggattgtgca
     2341 gttcccatgg caatcagaca acaaaggcat ttcaaaggga attattgaag ctcgttttgt
     2401 ttatgtcttt gtccttggta ttctgttcac cggtaccaaa gatttactta aagcacaagt
     2461 cattgcaaca gacttcaaaa ccaagactgt aggcttgtgg gaaatgcata gtggattagt
     2521 tcttctggca gctttgctct tgagaccaca caatcttcca gtgttagcat ttagtctctt
     2581 gattcagact gtgatgacta agttcatctg gaagcccctg agacatgatg cagctgagat
     2641 cactgtaatg cattattggt tcggtcaagc attcttctat ttccagggta attccaacaa
     2701 cattgctacc atcgacattt cagcaggctt tgtgggctta gatacctaca tggaagttcc
     2761 agccacattc ctcacagtat ttggaacata tgtagggcct gtgctctggg ccagccacct
     2821 tgtgtacttc ctgagctcag aaggaaacaa ttcagcactg agccgttcgt gcttctgcta
     2881 tgcactgatt tgttctgttc cagttgccac atacattgtc ctggtgacat ctctgcgcta
     2941 tcatttattc atatggagtg tattttctcc aaagcttctc tatgaaggaa tgcatctgct
     3001 catcacggct gccatttgtg cagtgttcac tgccacaaac cagactcgcc acaggagggc
     3061 ttaggtggag gcagatagct ggagctgagg tacttttagt tcctgtttgc atcgtggatt
     3121 tgagtattga actgcttaca tacaagattt ttctgaggtg gaaaaaaaag gatgtgaagc
     3181 ctgtgaaatg aatggataac ttaattttag atttaaatta aatagatgat taataaaaga
     3241 ccattttaaa tactatgtat taaaatttcc ctattgacaa tcactctgaa atttcagaaa
     3301 ttttagtttc ctctgagtga gttgtggcta ttatatgctt aaattgatgg aagaaaaagt
     3361 tctggacttt atcattatgt ttatctcaga gagcccagga gccctgtagg aggaggtgtg
     3421 tctgctacag gggctacatc aaagacctca caatcctaag aactcttaaa atcagggtta
     3481 gtagcacttg aagtgaaaac taaatcactt ccaaacacta ttcatttaaa aaataatgtg
     3541 ctggtggaca aggtagaaca cacttgtata atcccagtac tcaagaaggc aggaccaaga
     3601 atattatcat gtccagactg cttaggctgt gaggatgacc atgtctcaac tcctccccag
     3661 cctcaataaa aactactgta tattaataga acaaaataat tatatttttc aaaacaaata
     3721 tttaatgaga aaaataatat ttttaatgtt tttacaaata tcttaaatga ctcgctcaac
     3781 tgaagatagt tggaatccac atttgatcca ttgtaattta tgtttgaaaa ataagtaatc
     3841 cagcctcact ccgatctgtg gcgacatttt aacatgcgtg gggagggcgc ctgcgctacc
     3901 accccggctg aagagctagt gttagctagt ggctgctgga gaaggagtca gtttgcttca
     3961 gacactaacc gcaaacacat ctaagtaacc ctaattaaac tctgtactgg ggggagaggc
     4021 atgaaaggag gaggaggagg aggaagagtt cagagggagg aggaggggtg taagagagga
     4081 agatgggggt gaaaatgatc aaaatgtatg atatagatgt ataaaattat caaggattaa
     4141 atactatatt ttaaaagggt aagttatgtt aagtctgtgt gtatatacta tagcttgtga
     4201 gtttaaagag gggaagaaaa atgtacagta tatttcattt cataaaaaat ttatagtttt
     4261 attatctatc tcattttcta gaggaaataa ataatatgat ttctttgttg tttagacatt
     4321 taaactcctt agatacttca ataaaaacaa gctgtatgac ctcatgacat taa
//
