LOCUS       XM_036155140            3841 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus phosphatidylinositol glycan anchor
            biosynthesis, class B (Pigb), transcript variant X2, mRNA.
ACCESSION   XM_036155140
VERSION     XM_036155140.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3841
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..3841
                     /gene="Pigb"
                     /gene_synonym="Pig-b"
                     /note="phosphatidylinositol glycan anchor biosynthesis,
                     class B; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 6 ESTs, 90 long SRA reads,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 11 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:55981"
                     /db_xref="MGI:MGI:1891825"
     CDS             107..1396
                     /gene="Pigb"
                     /gene_synonym="Pig-b"
                     /codon_start=1
                     /product="GPI mannosyltransferase 3 isoform X2"
                     /protein_id="XP_036011033.1"
                     /db_xref="GeneID:55981"
                     /db_xref="MGI:MGI:1891825"
                     /translation="MDGAIERLHLPPHLRQYLQGSASSGERQCSIPDLDSQTWPSSSV
                     CCSGYKALLPPEAAGKPGSGTMGVPLPAVLLVHMVLLHTDPHEHHGDLPHCPRPFLLS
                     SGRLEVREQRQVLAPGGTCLCGPPHSSYPMGAAALQTFLPRTEKAPSDSASFFTCRWT
                     LVQLNFLKFNVLQNLGTFYGSHPWHWYLSQGFPVVLGTHLPFFIHGCFLAPRRLHILL
                     LTVLWTLLVYSMLGHKEFRFIYPVLPFCMVFCGYSLAHLKTWRKAALSFLLLSNVPLA
                     FYTGLVHQRGTLDVMNHIQKVCPRGPDPASASVFIMMPCHSTPYYSHVHCPLSMRFLQ
                     CPPDLTGKTQYLDEADMFYLNPLRWLQQEFHSNASLPTHLVTFNVLEKEINTFLTSGN
                     YERAATFFHTHWPERRTGSHIHVYERRLPGRVNTGGN"
ORIGIN      
        1 tacttaactg cttcttagtg cagacaagct ttgttcctga tgaatactgg cagtccctcg
       61 aagttgcaca ccgcatggtt ttcagttatg gttatttgac ctgggaatgg acggagcgat
      121 tgagaggcta cacttacccc ctcatcttcg ccagtattta caaggttctg catcttctgg
      181 ggaaagacag tgttcaattc ctgatctgga ttcccagact tggccaagct cttctgtctg
      241 ctgtagcgga tataaggctc tactccctcc tgaagcagct ggaaaaccag gaagtggcac
      301 aatgggtgtt cctctgccag ctgtgctcct ggttcacatg gtactgctgc acacggaccc
      361 tcacgaacac catggagacc tccctcactg ccctcgccct tttctactat cctctggaag
      421 gctcgaggtc cgtgaacagc gtcaagtact cgctcctggt ggcacttgct tgtgtggtcc
      481 gccccacagc tcttatccca tgggtgccgc tgctcttcag acatttctac caagaacaga
      541 gaaagctcca tctgactctg catcattttt tacctgtagg tggacgctgg tccaattaaa
      601 tttcttgaaa tttaacgtgc tgcagaacct agggacgttt tatggctccc atccatggca
      661 ctggtacctc agtcaagggt tcccagttgt cctggggacc cacttacctt tcttcattca
      721 cggttgcttc ctagccccaa ggaggctcca catactgctg ctgaccgtgc tgtggacact
      781 gctggtatac agcatgttgg gccacaaaga attcaggttt atctatccag ttttaccatt
      841 ctgcatggtg ttctgtggtt actcactagc ccacctgaag acatggagga aggcagccct
      901 gagcttcctg ctcttgtcaa atgtgccact ggcattctac actggcctag ttcatcagag
      961 aggcaccctg gatgtcatga atcacattca gaaagtctgc ccccgaggtc ctgacccagc
     1021 ttcggcctca gtattcataa tgatgccctg ccactccacg ccttactaca gccatgttca
     1081 ctgcccactg tccatgcggt ttctccagtg tcccccagac ttgactggaa aaactcagta
     1141 tcttgatgaa gcagatatgt tctacttaaa ccccttaaga tggttacaac aagaatttca
     1201 cagcaatgcg tcactcccca ctcacttggt caccttcaat gttctggaga aggagatcaa
     1261 taccttcctc acctcaggga actacgagag ggccgctaca ttcttccaca ctcactggcc
     1321 agagcgccga actggaagtc acatacacgt ctacgagcga aggttacccg gcagggtcaa
     1381 cacaggaggg aactgaactg taaggacttc tgcagagacg ttggcataac tgagagaaac
     1441 tgtaggtgac cgtgaaatga gaggaagcca ctggggacag ctgtcccata cactgtcctg
     1501 aggcattctc agagaacaca aatacggcgc cagacttgag agagaccttt agttttcctc
     1561 acggtgcagt ttattgtttc ttccatagca ttcaggtgtg caagagagtt cacaagacaa
     1621 gccagccagc tcttcacaaa ccaacgggct cttgaaccca cagagagaca aaagcgtgag
     1681 agtagagatg ttagcgcgga gtcccgcctc agcacagtcc tcaggccctg ctgcacacct
     1741 ccacacggca cgaaatgcct gtgtgagctg agctcagctc ctcaaaccaa gccctgtttc
     1801 atgcacagac tatttcatgc ctggcttcct taataaaact accatttccc ccaccccccc
     1861 ccagcaggaa aaaaagtttt tgtttttaac aaacctaagc tacaggaaaa tgcaagttag
     1921 taagctttgc ttttgcataa tataaagaca gtcatgggga gttcatctca acatcaaacc
     1981 aagtagatag catccacagc tcttaacttc ctaacttaat cacaaatcag tacttaggat
     2041 cgaaaggtaa ctgccccagt tctagctcaa gatttgccgt gtgtcttccg ttagcgcgac
     2101 cgtatttttg ccatttacct tccctttcat aaggctgtgg atgaaggtgc ttctgctctt
     2161 gttttcggtg cctggcgttt tcaatagtta ccatacgttg ctttttatca ggtcgactga
     2221 aagtagtaaa cacatttttt taatctatgt tagagttcag ttttctaaaa gtaaaaagaa
     2281 caatgttttt ccccacttat ctacctgaac actgcaaaaa gataaaacag aaaataacat
     2341 cctactctaa ttccaggaaa aaggggtatt atttcaacac tgaaggaaaa agggcagaca
     2401 tcaatactcc cgcactggcc ggaaggggag gcctgacagg tgacgaggag caggaatgta
     2461 accataaaat aatgaggcgt ttccgttatc actccaggaa gcataagaac aaccagcctc
     2521 gtctccatcg gctttatccc tcaatgagag aagagacaca gctcgcagag cagtctccaa
     2581 ccttcccccg ttccaggcaa gtgcagtgag caggcactgc tgtcttccca ctctgcctgc
     2641 tggctcctcc actgccttac gccaggacct gcacacaagc gctctgcagc gctcagctct
     2701 aagcacctga cttgacatct ctgggttcac gtgcatcact ctgcactctt ctcgcttagc
     2761 cttctctcta accagcacag atagcattgt cccctgcact agaccaatgg ggactggctt
     2821 cgaagtgagt agaaatggcc atgtacctac caacccgtcc tctccaaata aatgtcaaca
     2881 gatacctcca aaatcaagtt gcttctggtt cctcttgctt agagcttcct tctggagttc
     2941 tgagtaatct cagcatccaa cagtgaagtc attccaggtg aacctacacc acttactttc
     3001 tacttccctt acacaaggta gaagtgtctg gctatgtgac ttgttgacaa tgtatcttgt
     3061 ctgctcctca ccacctctga tgacctcatt caaactccca tcagtttctc atgtgcagac
     3121 caccacagct ggcttcacac cttgccaatc aaccctcttg gctgctgcca gtcatctaga
     3181 ggactaggca ccatcccacc ccgtgacaag atccttcaga aattctccat ctcacaagac
     3241 aggcacttga gggcaaaagg gagaccttcc tgatcacgcc agctcacctg gtttctgtaa
     3301 agtaggtctc catctctcca acctctgcaa aggaccttcc gttccaggga ggccctgctc
     3361 tatccacgca ccaaccctca cttctctccc agaagctagt ttcatagcaa gtttagatgc
     3421 aaggtcactt caatcatgaa gattttctaa ccatctctag acaacctgag gtcactacac
     3481 cttcatgcct ctctctgcac acctaactct tgaacagcaa gaagttatcc acgcttcctt
     3541 aaagcagcct ccaacattgc tcattaaagc atccgcttca ggaactaaag acatcagaaa
     3601 gcagtctcat tattttatag gcacactgca tttattcata aagatggaac ttgactctca
     3661 aaagtaaaca gacatttaca gttacagaat aaaaagctga aggacaacag acagtcttga
     3721 agaacattat gggattttgt ggctcctgag cgtccagcac ccttctcagt tttaaccctg
     3781 taaccagtac tcctaaactc aataaacctg acagtgatta tagctgggca gctccacatg
     3841 a
//
