LOCUS       NM_001145644             537 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus proline/histidine/glycine-rich 1 (Phgr1), mRNA.
ACCESSION   NM_001145644
VERSION     NM_001145644.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Herron,B.J., Silva,G.H. and Flaherty,L.
  TITLE     Putative assignment of ESTs to the genetic map by use of the SSLP
            database
  JOURNAL   Mamm Genome 9 (12), 1072-1074 (1998)
   PUBMED   9880682
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK019007.1 and BY707466.1.
            
            On Feb 15, 2019 this sequence version replaced NM_001145644.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY707466.1, AK019007.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-532               AK019007.1         2-533
            533-537             BY707466.1         535-539
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 59.46 cM"
     gene            1..537
                     /gene="Phgr1"
                     /gene_synonym="1810007E14Rik"
                     /note="proline/histidine/glycine-rich 1"
                     /db_xref="GeneID:53906"
                     /db_xref="MGI:MGI:1858382"
     exon            1..30
                     /gene="Phgr1"
                     /gene_synonym="1810007E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            31..78
                     /gene="Phgr1"
                     /gene_synonym="1810007E14Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             69..407
                     /gene="Phgr1"
                     /gene_synonym="1810007E14Rik"
                     /codon_start=1
                     /product="proline, histidine and glycine-rich protein 1"
                     /protein_id="NP_001139116.1"
                     /db_xref="CCDS:CCDS57182.1"
                     /db_xref="GeneID:53906"
                     /db_xref="MGI:MGI:1858382"
                     /translation="MHPGGKGHCGPPPGHGPGHCHEGHHPPGPGGPHPGHGPGHCPGG
                     HHPPGHGGPSHGHGPGHCPGGHHPPGHGGPSHGHGPGHCPGGHHPPGHGGPSHGHGPG
                     HCGPHPGPHH"
     exon            79..86
                     /gene="Phgr1"
                     /gene_synonym="1810007E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            87..537
                     /gene="Phgr1"
                     /gene_synonym="1810007E14Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      500..505
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Phgr1"
                     /gene_synonym="1810007E14Rik"
                     /note="hexamer: AATAAA"
     polyA_site      524
                     /gene="Phgr1"
                     /gene_synonym="1810007E14Rik"
                     /note="major polyA site"
ORIGIN      
        1 agccttcctg ttcctactct acactctcag gtgctccgtg tgtcacttcc tgctcttgcc
       61 ctgtaaagat gcatccaggt ggcaaggggc attgtgggcc accccctggc catggtccgg
      121 gacactgtca tgagggacat caccctccag gacctggtgg tccacaccct ggccatggcc
      181 caggacactg tcctggagga catcaccctc caggacatgg tggcccatcc catggccatg
      241 gcccagggca ctgtcctgga ggacatcacc ctccaggaca tggtggccca tcccatggcc
      301 atggcccagg gcactgtcct ggaggacatc accctccagg gcatggtggc ccatcccatg
      361 gccatggccc agggcactgt ggccctcacc ctggtccaca tcactgagaa atcagaagaa
      421 atgaagacac aagatgagga gtctgcatgg aatccccagc tgacctggca ccgggtctaa
      481 actagaattt tcccttgcaa ataaatagcc tcttggaggc catatttgtt gttgtta
//
