LOCUS       NM_001346526            6670 bp    mRNA    linear   ROD 01-AUG-2024
DEFINITION  Mus musculus PHD finger protein 24 (Phf24), transcript variant 1,
            mRNA.
ACCESSION   NM_001346526 XM_006537812
VERSION     NM_001346526.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6670)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 6670)
  AUTHORS   Park,J.C., Luebbers,A., Dao,M., Semeano,A., Nguyen,A.M.,
            Papakonstantinou,M.P., Broselid,S., Yano,H., Martemyanov,K.A. and
            Garcia-Marcos,M.
  TITLE     Fine-tuning GPCR-mediated neuromodulation by biasing signaling
            through different G protein subunits
  JOURNAL   Mol Cell 83 (14), 2540-2558 (2023)
   PUBMED   37390816
REFERENCE   3  (bases 1 to 6670)
  AUTHORS   Hoeffel,G., Debroas,G., Roger,A., Rossignol,R., Gouilly,J.,
            Laprie,C., Chasson,L., Barbon,P.V., Balsamo,A., Reynders,A.,
            Moqrich,A. and Ugolini,S.
  TITLE     Sensory neuron-derived TAFA4 promotes macrophage tissue repair
            functions
  JOURNAL   Nature 594 (7861), 94-99 (2021)
   PUBMED   34012116
REFERENCE   4  (bases 1 to 6670)
  AUTHORS   Salio,C., Aimar,P., Malapert,P., Moqrich,A. and Merighi,A.
  TITLE     Neurochemical and Ultrastructural Characterization of Unmyelinated
            Non-peptidergic C-Nociceptors and C-Low Threshold Mechanoreceptors
            Projecting to Lamina II of the Mouse Spinal Cord
  JOURNAL   Cell Mol Neurobiol 41 (2), 247-262 (2021)
   PUBMED   32306148
REFERENCE   5  (bases 1 to 6670)
  AUTHORS   Jiang,D., Burger,C.A., Casasent,A.K., Albrecht,N.E., Li,F. and
            Samuel,M.A.
  TITLE     Spatiotemporal gene expression patterns reveal molecular
            relatedness between retinal laminae
  JOURNAL   J Comp Neurol 528 (5), 729-755 (2020)
   PUBMED   31609468
REFERENCE   6  (bases 1 to 6670)
  AUTHORS   Liu,Z., Wang,F., Fischer,G., Hogan,Q.H. and Yu,H.
  TITLE     Peripheral nerve injury induces loss of nociceptive neuron-specific
            Galphai-interacting protein in neuropathic pain rat
  JOURNAL   Mol Pain 12, 1744806916646380 (2016)
   PUBMED   27145804
  REMARK    GeneRIF: GINIP is predominantly expressed by small nonpeptidergic
            nociceptive neurons and that nerve injury triggers loss of GINIP
            expression.
            Publication Status: Online-Only
REFERENCE   7  (bases 1 to 6670)
  AUTHORS   Gaillard,S., Lo Re,L., Mantilleri,A., Hepp,R., Urien,L.,
            Malapert,P., Alonso,S., Deage,M., Kambrun,C., Landry,M., Low,S.A.,
            Alloui,A., Lambolez,B., Scherrer,G., Le Feuvre,Y., Bourinet,E. and
            Moqrich,A.
  TITLE     GINIP, a Galphai-interacting protein, functions as a key modulator
            of peripheral GABAB receptor-mediated analgesia
  JOURNAL   Neuron 84 (1), 123-136 (2014)
   PUBMED   25242222
REFERENCE   8  (bases 1 to 6670)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   9  (bases 1 to 6670)
  AUTHORS   Munton,R.P., Tweedie-Cullen,R., Livingstone-Zatchej,M.,
            Weinandy,F., Waidelich,M., Longo,D., Gehrig,P., Potthast,F.,
            Rutishauser,D., Gerrits,B., Panse,C., Schlapbach,R. and Mansuy,I.M.
  TITLE     Qualitative and quantitative analyses of protein phosphorylation in
            naive and stimulated mouse synaptosomal preparations
  JOURNAL   Mol Cell Proteomics 6 (2), 283-293 (2007)
   PUBMED   17114649
REFERENCE   10 (bases 1 to 6670)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Aizawa,H., Yuasa,S.,
            Nakajima,D., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: II. The complete nucleotide sequences of 400 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (1), 35-48 (2003)
   PUBMED   12693553
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL772334.17, AL672276.9 and CJ250336.1.
            
            On Oct 19, 2016 this sequence version replaced XM_006537812.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1). Variants 1, 3, 4 and
            6 encode the same isoform (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660821.185718.1,
                                           SRR9219382.71383.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-172               AL772334.17        202952-203123
            173-299             AL772334.17        208276-208402
            300-681             AL672276.9         69824-70205
            682-867             AL672276.9         70841-71026
            868-946             AL672276.9         74049-74127
            947-1152            AL672276.9         74381-74586
            1153-1313           AL672276.9         74823-74983
            1314-1409           AL672276.9         75294-75389
            1410-6644           AL672276.9         75713-80947
            6645-6670           CJ250336.1         439-464
FEATURES             Location/Qualifiers
     source          1..6670
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 22.91 cM"
     gene            1..6670
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /note="PHD finger protein 24"
                     /db_xref="GeneID:230085"
                     /db_xref="MGI:MGI:2140712"
     exon            1..172
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     exon            173..299
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     exon            300..681
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     exon            682..867
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     exon            868..946
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     exon            947..1152
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     exon            1153..1313
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     exon            1314..1409
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     exon            1410..6657
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /inference="alignment:Splign:2.1.0"
     regulatory      6034..6039
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /note="hexamer: AATAAA"
     polyA_site      6053
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /note="major polyA site"
     regulatory      6631..6636
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /note="hexamer: AATAAA"
     polyA_site      6657
                     /gene="Phf24"
                     /gene_synonym="GINIP"
                     /note="major polyA site"
ORIGIN      
        1 gtgctcaggg cgcgcgccac cgctgccgcc gcctcagcct gtcgtgccgc ccgcgccgcc
       61 cgctcccggt gctcggccca gcacgtcggc tctggagcgg ccgtgggcag cgcgggcccg
      121 cggcgtagag tccgccggcc tcggacccgc gtcccgcacg cggactgtcc cggttactgc
      181 caggagaacg gcgactagaa acagactccc aggacactgg atggagaaac tggattccta
      241 aagcaacagg cagaggagaa cagctggacc acttgggttg cctcaaagac ctgccgagga
      301 gccatggggg tgttgatgtc caagcggcag acagtagagc aggtgcagaa ggtgagcctg
      361 gctgtgtcag ccttcaagga tgggctacgg gacaggcctt ccattagacg tgggggtgag
      421 ctgccagggt cccgccgtgg cactgtggag ggctctgttc aggaagtaca ggaggagaag
      481 gaagcagagg cgagcgcccc cgtggtccag gaagagagca gtatcaaccg cgcagcctgg
      541 gagcggctcc gagatgggcg tggcgtcgag cctgaggagt ttgacaggac cagccgattc
      601 acgcctcctg ccttcatccg gcccacgcgg aagctggacg atgacaaacc tccagatatc
      661 tgcttggaac cccgggagcc tgttgtcaac gacgagatgt gtgacgtctg tgaagtctgg
      721 accgctgaga gcctcttccc atgcagagtc tgcaccaggg ttttccacga tggttgcctg
      781 cgccgcatgg gctacctcca aggggacagt gcagtggagg tgactgagat ggcccataca
      841 gagacaggct ggagctgtta ctactgtgac aaccttaacc tgctgcttac tgaggaggag
      901 atgtatagcc ttactgagac ctttcagcgg tgtaaagtca tccctgattg ctccctgaca
      961 ctggaggact ttgtgcgcta ccgccaccaa gcagcaaagc gaggggagag cagcagggcc
     1021 ctgactgacg agcaagagga gcaggcagcc cgccagtttg cagccttgga ccctgaacaa
     1081 cggggtcacg tagagtggtc cgacttcttg tcccacgaat cccttcttct gctgctgcag
     1141 ctgcgtcccc agaactctct cttgaggctc cttactgtca aggagaggga acgagcccga
     1201 gccaccttcc tggcacgggg cagagggagc accatcagcg aggcggagtg ccaccatgcc
     1261 cggcattctt ggttctgtaa acgccttaca gaggctcctt cctgcagtgt cagcatcagc
     1321 catgttgggc ctatagcaga cagcagccca gctgccagca gcagcaagag tcaggagaag
     1381 gccctgctgc ccacagagca ggagtccaga tacgtggatt ggcccacctt cctaagagag
     1441 aacgtcatct acatcttggc tgctcgtcct aacagcggag cgatccacct gaagccccca
     1501 ggataggtgg gacagagaag ctcagttctg ggacggtggc atcctctctc tctctctctc
     1561 tttcctttct ttttccttta ccaacctctg gcactgagac tcatgggaat gggacactgc
     1621 caacatctta atttgtcatt aagctttatg gcactgaagc caccgttccc ctcacaaccg
     1681 aggcagtatt gccatagtga gaggccccaa gagctgtggc attacctgct atggatcacc
     1741 tcctgcccgc acatcataaa actacctgcc acctcacgca tacgtgtgtg cacatgcgca
     1801 tacaaccaca tacatgccta gacatccatg ccttcaaact cctttggttc tttctttgat
     1861 gaaaaaggac caaaagcctt ttgttgagcc cccctggttt agataagagg gtctcttctc
     1921 actcttttta ttggtcagtt ctgattccca ggagaaagaa ggggacaatt taaattcact
     1981 tcccctccag gagatgccga gaggcccccc tgcccacatg gaaacgccct tcggtgatga
     2041 ccactgttat ttgtgagtgt ctgtatgtcc ctcaggtatg ccatggtggg agaacagttc
     2101 aaaaccatcc cgaagtttgt gtttaaattc tgattccttg tgatagagaa ggaacctagt
     2161 ttgtggattt ctgcctggag aaagtggaga cagtctctcc cagagagcca gaagtctagg
     2221 aacttttcag ccaggtcatc caacttcaca agtccttagc agaacaggaa aaccaagatg
     2281 agacccctgg tccctagtct tcaagtggtc caaagctcta gggacccaag aagaacagat
     2341 acactggcag gaatcactgt gtgtgaggtg ctttagccta ggtggcggcc tcagaggccg
     2401 atgaggatgc agaaaagaaa gcccgggctt ttcctacttt ccagcccaac tcagccacag
     2461 acatagaact gtggcatcat atggagggca agccaccctc ttacatagcc agaggagctc
     2521 tgcagaatgc ctacgcagtt gtgcttttta agaagagaca acaaaggctc gagaagattt
     2581 gtatctcaac tgtcaagaag tcctagtcag cgtcagaagg gggacagtgt gtccttctcc
     2641 cgtctcccca gtcgctgctt ctccctgatg ctcactccgt gtcttcccct cacctgagag
     2701 gaccttgtgg acaagtggag aacgaacgcc atgggtgtag caagcttggc ctccaggctt
     2761 tgtgtaaccc atcacccagt tctgaagctc tggagtcaga acatggtgtg ggtcagccct
     2821 aagacctagg gatccaggtt ctggatttct gttttcaacc agatgacttg ggtatgggca
     2881 gttctgacaa ctagttcttc atgagagaac tgagcaaagt cccgcagaaa gcttgcattg
     2941 tctccactgc tgaaagcact tgtactaaag tggatggttt caggagaagg agcatgctgc
     3001 tcagtgttga gaggctcaga tgccatgggc acctccagcc aagccttgct aagaaccctg
     3061 catgctctcc ttctgtagga cctgccttac ctagaagcag ggtagtatac tgctggagac
     3121 agattattta ggactgaaat gaagcaggca ggagatacat gtgggttcat tttgaaaccc
     3181 acagctttta aaaactatta cttaaagctg ggcatggtgg tacataccct taatcccagc
     3241 ccttgaggga cagaggcagg tggatctcta tgagttgaag gccagactgg tctaaatagc
     3301 aagttctagg ccagccagga ttacacaagt gagacttggt ctcaataaca acaatgaaaa
     3361 tgactcggcc atgttcccag gactgatcag taagatggcc cattattgaa tcgagtcgaa
     3421 aacaaagcac aaacctgctg ggctcaagga ctgcatctgt agcagccagc cctggggttt
     3481 tccattgaga agattaaagc atgctaaatt caggggctct tgctcgctct cccgatgagt
     3541 catctttctc tctctctgtg gctgtgggct gctgaaccgc acagagataa ttcatctctg
     3601 ggctttggga attggacagt gcttgtctgc cactccccag ctgtggacac tgggagtcca
     3661 tctcttctgt tccatggtcc tctacagacc aagacgatgc ttaccacctt ggagcagctg
     3721 tttgttgctt ctgtacggtt gaatggcaga agcccacagg ctgaatcgga ctgtgcagag
     3781 ccagccccgc agctcatcct caacaggacc aggcctatct gggatcacct ctttacccag
     3841 gatggcacag gacagctgac cttttctcca taagcatcca gtgttgttcc aaaaggaggg
     3901 cccattgctc cctagtccgt tgttacagaa gcccgcccca gccctatgtc cataatctct
     3961 ctttggtgtg ggctcagtgt ttatagaggt acactgtcat caacctagta agactcattc
     4021 cctttccaag cctttctatc actgtgactg tctaaaattc tgccaagtgc aaaggttaat
     4081 gtctggctct gatgagggtc tgagaaatgt ttcagtcttt cccatcttgg ctgctgaaag
     4141 ttaagatcaa tgcttttctc aacaccgccc atcctgagct ccaaccaata gaggcttggg
     4201 ttgcatatat acttctctga agaccacttc ccccaggcct ggttctcatc cagaagttct
     4261 catccttata ttcagattaa ctaagggaac atcaggatgc cacagcagag ctgcagggac
     4321 agagccgctg agagcggctc agcactgcat aacctctccg ggtctgtccc ttggcctcct
     4381 tcccccacaa gacatttgag cagcagcccc tatggtatcc agggatgaag cagtttcctt
     4441 attcctaggt actgattcaa ctcaagtgct cttcctttga ggaaagctgc agcagaagcc
     4501 atgaatacat tgcctctttc tagccccagc ccaagcaatg ggctggcagg gtaaacactt
     4561 gcctttctgg acctagtgct tcctaaggga ggtcacctgg accttgttta agtggccaag
     4621 tcttggagtt cccccattcc tatcaccaaa acagaaagca cagaattcaa ctgcctggga
     4681 agagggcact ccactgggaa gtgggtgcca gggttgtccc atgccttagt ccaaagcaca
     4741 ataatcattg caggcatcac ggcttcccaa agtgcataaa tcagtaaggc gaagagaaag
     4801 gatcaacaga aactgtctag taggggccca tccagccgtg actccccaag aggcaaaagc
     4861 aagcaacctt aaggcacaaa acttgaactg gcagcaggct ctggtagtcc acgtctcctt
     4921 ccaaccagca gagtaaaggc acagacacag ttgtgcaccg catatgtatt cagagagaca
     4981 caagtatgta gagtcattca tggcccagag cgtggaaaat aggggcaagt cttgtctgga
     5041 ctgatgatta agagacccgt ttccattctg gaaatccatt ccaaaaaccg tatcactcgt
     5101 cagcatcttc gtagtacaag catcgaagag tgctcttaca caaaccaaac agctaccaca
     5161 ttagtaggca atataactta tgggaccacc attgtgcatg ccatctgttg ttggttgaaa
     5221 tgtcactatg tgacacgtga ctattctgta cttggctcta aaaggccaaa caaccttaat
     5281 gccaaaattt cagaacatcc tgacagcatc tgtaaccatg gcccctttct agcctgccat
     5341 ttacagtgga gccaagtcgt cacatcctcc ttgccatctg ggtttcgtct gctcgctgta
     5401 tctctcttgt cctggctgca gccaagacaa aggagctctt gagtgggcat gatcattata
     5461 cggcctggtc ccacagctca gcctgggaat atggtggagc cgagcattcc tcctgctgtt
     5521 gctggcctat tgccactatg tttggcaacc ttgtaaagaa aatgataggc tacagaatcc
     5581 ccactagacc aacactaaag aaaagctgct tccctctggg atgcatgccc caggggccca
     5641 gagcttggag acacgggtta ggtcttatct agacaaatag tttagaagcc catttcattc
     5701 tagtttggaa tagaaagggt tgccctttct atatccataa tcatcaaagg ccttcaagtt
     5761 cagcctccaa gcattaaggg gtatccatag tttgtttcca gccaaacaga ctgggagggg
     5821 ggttctgaga gcccttcagt aagtgaggac ccaaggccct ctggctcctc gtgaccttcc
     5881 cgtgtacttt cttgctgaag gtaacttaac agtaatcaga ggggaccaac cccaagccct
     5941 gtcttcctgt ctacagctgc atgattctcc ctgtgacagc cttcacagta ctccaagcag
     6001 gagcccccag aggctgggca ctgcagacac cataataaac caattgcaat gttgtttctg
     6061 ctgcttgctt cctagtgttt gggggatcct cccatctccc tgtcctgtcc catcaatgac
     6121 caattcctgg ctcgagtata agacaggaca ctgtagcctt cagtccatct tcagtggtca
     6181 tgttctttgc atgcacgcac atgtggtgcc tgtcaaagct cccttcaagg gacctgctgt
     6241 agtgtagtct agcaccaccc ctcccgactc tcaaaacaga ccgagaaccg ggcttgtagc
     6301 cacattactg aagcttctgc cgccgccgac acaactttca cacctcagct tccatcttcc
     6361 atacctcttc ccatagggca gggagtgtcc accaggctca agatgacacc gcatgagtcc
     6421 cttcctatct ccagactcag gggagctgag cattggggta gcagaaggca taaaaattag
     6481 atcctgggct accaagatgg cttcagagag caaaggcgct tactgtcaag ctgatgaact
     6541 gagttcaatc cccacggcag atgacgagaa ccaactcctc tgagatgtcc tctgatctcc
     6601 acgtgtgtca tagcatgcgt acatacacaa aataaacatg acactaaaaa attaaaaaaa
     6661 aaaaaaaaaa
//
