LOCUS       NM_199015               2696 bp    mRNA    linear   ROD 17-DEC-2022
DEFINITION  Mus musculus PHD finger protein 11D (Phf11d), mRNA.
ACCESSION   NM_199015 NM_001164324 XM_127867
VERSION     NM_199015.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Zhang Y, Dean C, Chessum L, Nguyen D, Stewart M, Taylor M, Cookson
            WO and Moffatt MF.
  TITLE     Functional analysis of a novel ENU-induced PHD finger 11 (Phf11)
            mouse mutant
  JOURNAL   Mamm Genome 25 (11-12), 573-582 (2014)
   PUBMED   25091723
  REMARK    GeneRIF: Only Phf11d is present in multiple mouse tissue cDNAs.
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Hoffman BG, Zavaglia B, Witzsche J, Ruiz de Algara T, Beach M,
            Hoodless PA, Jones SJ, Marra MA and Helgason CD.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   3  (bases 1 to 2696)
  AUTHORS   Roma G, Cobellis G, Claudiani P, Maione F, Cruz P, Tripoli G,
            Sardiello M, Peluso I and Stupka E.
  TITLE     A novel view of the transcriptome revealed from gene trapping in
            mouse embryonic stem cells
  JOURNAL   Genome Res 17 (7), 1051-1060 (2007)
   PUBMED   17540781
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BG083212.2 and EU155107.1.
            
            [WARNING] On Apr 20, 2023 this sequence was replaced by
            NM_199015.5.
            
            On or before Sep 28, 2010 this sequence version replaced
            NM_001164324.1, NM_199015.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK156583.1, SRR12282455.28536542.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849375,
                                           SAMN00849380 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-437               BG083212.2         1-437
            438-2696            EU155107.1         49-2307
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 31.48 cM"
     gene            1..2696
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /note="PHD finger protein 11D"
                     /db_xref="GeneID:219132"
                     /db_xref="MGI:MGI:1277133"
     exon            1..124
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     CDS             82..1044
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /note="PHD finger protein 11 family member"
                     /codon_start=1
                     /product="PHD finger protein 11"
                     /protein_id="NP_950180.3"
                     /db_xref="CCDS:CCDS27170.3"
                     /db_xref="GeneID:219132"
                     /db_xref="MGI:MGI:1277133"
                     /translation="MAQETAPPCGPVSRGDSPIIEKMEKRTCALCPEGHEWSQIYFSP
                     SGNIVAHENCLLYSSGLVECETLDLRNTIRNFDVKSVKKEIWRGRRLKCSFCNKGGAT
                     VGCDLWFCKKSYHYVCAKKDQAILQVDGNHGTYKLFCPEHSPEQEEATESADDPSMKK
                     KRGKNKRLSSGPPAQPKTMKCSNAKRHMTEEPHGHTDAAVKSPFLKKCQEAGLLTELF
                     EHILENMDSVHGRLVDETASESDYEGIETLLFDCGLFKDTLRKFQEVIKSKACEWEER
                     QRQMKQQLEALADLQQSLCSFQENGDLDCSSSTSGSLLPPEDHQ"
     exon            125..246
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            247..354
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            355..488
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            489..538
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            539..606
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            607..670
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            671..802
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            803..874
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            875..1041
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
     exon            1042..2686
                     /gene="Phf11d"
                     /gene_synonym="D14Ertd668e; Phf11; Phf11l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgaaactagg agctagaagt agaatctgga aaccagaaac tagaaactca gtcgtgctta
       61 taggagtaca ggcgcccagt catggcccaa gagacagcac caccgtgtgg cccagtctca
      121 aggggtgaca gtccaatcat agaaaagatg gaaaaaagga catgtgccct gtgccctgaa
      181 ggccacgagt ggagtcaaat atacttttca ccatcaggaa atatagttgc tcatgaaaac
      241 tgtttgctgt attcatcagg actggtggag tgtgagactc ttgatctacg taatacaatt
      301 agaaactttg atgtcaaatc tgtaaagaaa gagatctgga gaggaagaag attgaaatgc
      361 tcattctgta acaaaggagg cgccaccgtg gggtgtgatt tatggttctg taagaagagt
      421 taccactatg tctgtgccaa aaaggaccaa gcaattcttc aagttgatgg aaaccatgga
      481 acttacaaat tattttgccc agaacattct ccagaacaag aagaggccac tgaaagtgct
      541 gatgacccaa gcatgaagaa gaagagagga aaaaacaaac gcctctcatc aggccctcct
      601 gcacagccaa aaacgatgaa atgtagtaac gccaaaagac atatgacaga agagcctcat
      661 ggtcacacag atgcagctgt caaatctcct tttcttaaga aatgccagga agcaggactt
      721 cttactgaac tatttgaaca catactagaa aatatggatt cagttcatgg aagacttgtg
      781 gatgagactg cctcagagtc ggactatgaa gggatcgaga ccttactgtt tgactgtgga
      841 ttatttaaag acacactaag aaaattccaa gaagtaatca agagtaaagc ttgtgaatgg
      901 gaagaaaggc aaaggcagat gaagcagcag cttgaggcac ttgcagactt acaacaaagc
      961 ttgtgctcat ttcaagaaaa tggggacctg gactgctcaa gttctacatc aggatccttg
     1021 ctacctcctg aggaccacca gtaaaagctg ttcctcagga aaactggatg gggcctccat
     1081 gttctccaag gatcgaggaa gtcttcctgc ctaccctgcc caccccagtc aagggcagca
     1141 acaccagagc tttgctcagc cttaaatgga atcttagagc tttctcttgc ttctgctact
     1201 cctacagatg gcctcatcat ggtctccact cagtattaat aactccatca gcatagagca
     1261 aactcaacac tgtgcattgc acactgttac catgggttta tgctcactat catatcacat
     1321 tgccaatatt tagcacactt aataaatgct tgtcaaaacc actgaagtgt gcaccgttta
     1381 tttaatacag tcccaggcag ccctcagatg tagcaagaca caatgcactc ttctgttttt
     1441 accaattttg tgggtcttca tcagactctt tttaaaaagt gtctttttgg catcagtcat
     1501 tacaagggca tgcttcatgt tcaagaccaa ctccagcttt tgaatctggg ctctttgact
     1561 cgagcaccat tagggggaat aggggatgtg gagcactaag actttcccca cctgacagta
     1621 tgcatcagat ctgtgtaccc acactgcccc tgacccttga ctcctctcac atccacattt
     1681 ctcatttcct cccatgatcc tctgggtcac agtaatgcgc ctgacagaat tggattgagc
     1741 tgtgtcccag catggtatct agtttgttat gtgtgctcac acacttgtga aggaatcact
     1801 cctggtgcaa tactgtgggt accaaggcct gtctaagcca cttcaggagg gatcaactgg
     1861 aatgactgcc atctgagcac ctgtcagaac cagctgggac ccttttatgt tagtgcttcc
     1921 tctgctgctt tacatacagc tggaatctgt tcatctcagt agattatacg gcacaaaaag
     1981 caccacgttt ggtgttcata atgtagatgt atatggggca aattgctaaa agaaacctgc
     2041 tgtgttatta ctgaaaaatg agccaaataa tcatagccct cagtttaata ccagaaccca
     2101 gagagctaaa ctctggcctt gttgccctct ggcctccgga aggatatcgt ggcccatgca
     2161 cacctctggg tacaacgttc atgttagaat ctttaggtat ccctttttag cctcggttgt
     2221 tatccccttc tcaccttctc ctaagaacta ttttgactta tgaggatagt ggctttttac
     2281 ataggaagtt caacagtcct cttctatcag aaataagatc ttttgcttcc tgaggtagtt
     2341 gagaactagt tgacacagta ttgctgtcta cagtattgct gtagacaagc atctacataa
     2401 gactgttcaa ttgattgttg ttttatatca aacaactttt gtaatactca tttttattgt
     2461 tacagtattt tataaatttt aaagaatatg ataaaaaatg aaaggtattt caggttttaa
     2521 aaggggtctc caggaggagt tggggtataa aaaagaaagg agcatgtgat gtgagtctat
     2581 ttactcaaaa tatgttttta aatgttaata aattcagata aaatgaaatt aggtatcttt
     2641 tctcatgata atgaaataaa acttaaataa aaaattcaca acttaaaaaa aaaaaa
//
