LOCUS       NM_001164327            1163 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus PHD finger protein 11B (Phf11b), mRNA.
ACCESSION   NM_001164327 XM_135671 XM_923001
VERSION     NM_001164327.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Zhang Y, Dean C, Chessum L, Nguyen D, Stewart M, Taylor M, Cookson
            WO and Moffatt MF.
  TITLE     Functional analysis of a novel ENU-induced PHD finger 11 (Phf11)
            mouse mutant
  JOURNAL   Mamm Genome 25 (11-12), 573-582 (2014)
   PUBMED   25091723
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC114007.6.
            
            On or before Aug 21, 2009 this sequence version replaced
            XM_923001.3, XM_135671.8.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EU155108.1, SRR13862062.136518.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849375,
                                           SAMN00849379 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-58                AC114007.6         144846-144903
            59-180              AC114007.6         147434-147555
            181-288             AC114007.6         154879-154986
            289-422             AC114007.6         158023-158156
            423-472             AC114007.6         160117-160166
            473-604             AC114007.6         161179-161310
            605-676             AC114007.6         162937-163008
            677-843             AC114007.6         164556-164722
            844-1163            AC114007.6         164893-165212
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 31.48 cM"
     gene            1..1163
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /note="PHD finger protein 11B"
                     /db_xref="GeneID:236451"
                     /db_xref="MGI:MGI:3645789"
     exon            1..58
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..846
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /codon_start=1
                     /product="PHD finger protein 11 family member"
                     /protein_id="NP_001157799.1"
                     /db_xref="CCDS:CCDS49510.1"
                     /db_xref="GeneID:236451"
                     /db_xref="MGI:MGI:3645789"
                     /translation="MDQEKPGCSNPVPNGDCPIIEKMEKRTCALCPEGHEWSQIYFSP
                     SGNIVAHENCLLYSSGLVESEAPDLPNTIRNFDVKSVKKEIGRGRRLKCSFCKNKGAT
                     MGCDLQSCTKNYHLSCAMEDHAILQVDEDHGTYKLFCQKHAPEAQEPTQRDATVKAPF
                     LKKCQEAGLLNVLLEYILEKMDLIHGRLLDETASESDYEGIETLLFESGLFEDTLIQF
                     QEVIKSKACEWEERQRLMKQQLEALADLQQSLCSYQENGDLDCSSSTSGSLLPPEDHQ
                     "
     exon            59..180
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
     exon            181..288
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
     exon            289..422
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
     exon            423..472
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
     exon            473..604
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
     exon            605..676
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
     exon            677..843
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
     exon            844..1163
                     /gene="Phf11b"
                     /gene_synonym="EG236451; Gm4902"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacaacacc cagccatgga ccaagagaag ccagggtgct ctaacccagt tcccaatggt
       61 gactgtccaa tcatagaaaa gatggaaaaa aggacatgtg ccctgtgccc tgaaggccat
      121 gagtggagtc aaatatactt ttcaccatca ggaaatatag ttgctcatga aaactgtttg
      181 ctgtattcat caggactggt ggagagtgag gctcctgatc tacctaatac aattagaaac
      241 tttgatgtca aatctgtaaa gaaagagatc gggagaggaa gaagattgaa atgctcattt
      301 tgtaaaaaca aaggagccac catgggatgt gatttacagt cctgcaccaa gaattaccac
      361 ttatcctgtg ccatggaaga ccacgcaatt ctacaagttg atgaagatca tggcacttac
      421 aaattatttt gtcaaaaaca tgctccagag gctcaagaac ccacacaacg tgatgcaact
      481 gtcaaagctc cttttcttaa gaaatgccag gaagcaggac ttcttaatgt tttacttgaa
      541 tacatactag aaaaaatgga tttgattcat ggaagactcc tggatgagac tgcctcagag
      601 tcagactatg aagggatcga gaccttactg tttgagagtg ggctgtttga agatacatta
      661 atacaattcc aagaagtaat caagagtaaa gcttgtgaat gggaagaaag gcaaaggctg
      721 atgaagcagc agcttgaggc acttgcagac ttacaacaaa gcttgtgctc atatcaagaa
      781 aatggggacc tggactgctc aagttctaca tcaggatcct tgctacctcc tgaggaccac
      841 cagtaaaagc tgttcctcag gaaaactgga tggggcctcc atgttctcca aggatcgagg
      901 aagtcttcct gcctaccctg cccaccccag tcaaggacag caacaccaga gctttgctca
      961 gccttaaatg gaatcttaga gctttctctt gcttctgctg ctcctgcaga tggtctcatc
     1021 atggtctcct ttcagtatta aaactccatc agcatagagc agaagctgtc ctgtgcattg
     1081 cttgctgtta ccctggaatt tctgctcact accataccac attgccaata tttagcacac
     1141 ttaataaatg cttgtcaaaa gga
//
