LOCUS       NM_024250               1665 bp    mRNA    linear   ROD 17-DEC-2022
DEFINITION  Mus musculus PHD finger protein 10 (Phf10), transcript variant 1,
            mRNA.
ACCESSION   NM_024250
VERSION     NM_024250.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Polanetzki V, Frob F, Baroti T, Schimmel M, Tamm ER and Wegner M.
  TITLE     Role of the Pbrm1 subunit and the PBAF complex in Schwann cell
            development
  JOURNAL   Sci Rep 12 (1), 2651 (2022)
   PUBMED   35173232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Busby T, Chen Y, Godfrey TC, Rehan M, Wildman BJ, Smith CM and
            Hassan Q.
  TITLE     Baf45a Mediated Chromatin Remodeling Promotes Transcriptional
            Activation for Osteogenesis and Odontogenesis
  JOURNAL   Front Endocrinol (Lausanne) 12, 763392 (2022)
   PUBMED   35046892
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1665)
  AUTHORS   Ji S, Yang Z, Gozali L, Kenney T, Kocabas A, Jinsook Park C and
            Hynes M.
  TITLE     Distinct expression of select and transcriptome-wide isolated
            3'UTRs suggests critical roles in development and transition states
  JOURNAL   PLoS One 16 (5), e0250669 (2021)
   PUBMED   33951080
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1665)
  AUTHORS   Basta JM, Singh AP, Robbins L, Stout L, Pherson M and Rauchman M.
  TITLE     The core SWI/SNF catalytic subunit Brg1 regulates nephron
            progenitor cell proliferation and differentiation
  JOURNAL   Dev Biol 464 (2), 176-187 (2020)
   PUBMED   32504627
REFERENCE   5  (bases 1 to 1665)
  AUTHORS   Elsen GE, Bedogni F, Hodge RD, Bammler TK, MacDonald JW, Lindtner
            S, Rubenstein JLR and Hevner RF.
  TITLE     The Epigenetic Factor Landscape of Developing Neocortex Is
            Regulated by Transcription Factors Pax6--> Tbr2--> Tbr1
  JOURNAL   Front Neurosci 12, 571 (2018)
   PUBMED   30186101
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 1665)
  AUTHORS   Xue Y, Canman JC, Lee CS, Nie Z, Yang D, Moreno GT, Young MK,
            Salmon ED and Wang W.
  TITLE     The human SWI/SNF-B chromatin-remodeling complex is related to
            yeast rsc and localizes at kinetochores of mitotic chromosomes
  JOURNAL   Proc Natl Acad Sci U S A 97 (24), 13015-13020 (2000)
   PUBMED   11078522
REFERENCE   7  (bases 1 to 1665)
  AUTHORS   Zhang HS, Gavin M, Dahiya A, Postigo AA, Ma D, Luo RX, Harbour JW
            and Dean DC.
  TITLE     Exit from G1 and S phase of the cell cycle is regulated by
            repressor complexes containing HDAC-Rb-hSWI/SNF and Rb-hSWI/SNF
  JOURNAL   Cell 101 (1), 79-89 (2000)
   PUBMED   10778858
REFERENCE   8  (bases 1 to 1665)
  AUTHORS   Phelan ML, Sif S, Narlikar GJ and Kingston RE.
  TITLE     Reconstitution of a core chromatin remodeling complex from SWI/SNF
            subunits
  JOURNAL   Mol Cell 3 (2), 247-253 (1999)
   PUBMED   10078207
REFERENCE   9  (bases 1 to 1665)
  AUTHORS   Reyes JC, Muchardt C and Yaniv M.
  TITLE     Components of the human SWI/SNF complex are enriched in active
            chromatin and are associated with the nuclear matrix
  JOURNAL   J Cell Biol 137 (2), 263-274 (1997)
   PUBMED   9128241
REFERENCE   10 (bases 1 to 1665)
  AUTHORS   Wang W, Xue Y, Zhou S, Kuo A, Cairns BR and Crabtree GR.
  TITLE     Diversity and specialization of mammalian SWI/SNF complexes
  JOURNAL   Genes Dev 10 (17), 2117-2130 (1996)
   PUBMED   8804307
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB247892.1, AK007873.1, BF467016.1, CA322732.1, CD363469.1 and
            AC182749.2.
            
            [WARNING] On Jun 29, 2023 this sequence was replaced by
            NM_024250.5.
            
            On Aug 6, 2009 this sequence version replaced NM_024250.3.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK007873.1, SRR7345562.1589316.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                CB247892.1         1-31
            32-409              AK007873.1         12-389
            410-591             BF467016.1         405-586
            592-1110            AK007873.1         572-1090
            1111-1154           CA322732.1         669-712
            1155-1311           AK007873.1         1135-1291
            1312-1397           CD363469.1         569-654
            1398-1650           AK007873.1         1378-1630
            1651-1665           AC182749.2         66643-66657         c
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17"
     gene            1..1665
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /note="PHD finger protein 10"
                     /db_xref="GeneID:72057"
                     /db_xref="MGI:MGI:1919307"
     exon            1..150
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..1560
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     BAF45a; BRG1-associated factor 45a"
                     /codon_start=1
                     /product="PHD finger protein 10 isoform 1"
                     /protein_id="NP_077212.3"
                     /db_xref="CCDS:CCDS28407.2"
                     /db_xref="GeneID:72057"
                     /db_xref="MGI:MGI:1919307"
                     /translation="MAAAGPGAALSPGRCDSDPASPGAQSPKDDNEDNSNDGTHPCKR
                     RRMGSGDSSRSCETSSQDLSFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSF
                     KRKYPDLERRDLSHKEKLYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEY
                     SVILQEKERQRITDHYKEYSQMQQQSTQKVEASKVPEYIKKAAKKAAEFNSNLNRERM
                     EERRAYFDLQTHVIQVPQGKYKVLPTDRTKVSSYPVALIPGQFQEYYKRYSPDELRYL
                     PLNTALYEPPLDPELPALDSDGDSDDGEDGGGDEKRKNKGTSDSSSGNVSEGDSPPDS
                     QEDTFHGRQKSKDKMATPRKDGSKRSVLSKSAPGYKPKVIPNALCGICLKGKESNKKG
                     KAESLIHCSQCDNSGHPSCLDMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFC
                     DVCDRGYHTFCVGLGAIPSGRWICDCCQRAPPTPRKVGRRGKNSKEG"
     exon            151..257
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            258..388
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            389..472
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            473..606
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            607..756
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            757..866
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            867..1020
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1176
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1177..1285
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1286..1474
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1475..1665
                     /gene="Phf10"
                     /gene_synonym="1810055P05Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcggcgg ccgctgggac taggcgaagg cggcgacgac gacggaggcg cggggcgctt
       61 gggctgatgg cagcggccgg gcccggggcg gcgctgtccc cggggcggtg cgacagcgac
      121 ccggcctccc ccggagcgca gtccccaaag gatgataatg aagataactc aaatgatggg
      181 acccatccat gtaaaaggag gcgaatgggc tcaggagaca gctcaagaag ttgtgagact
      241 tcaagtcaag atcttagctt cagttactac ccagcagaaa acttaatcga atacaaatgg
      301 ccacctgatg aaacaggaga atactatatg cttcaggagc aagtcagtga atatctgggt
      361 gtgacctcct tcaagcggaa atatccagat ttagagcgac gagatttatc tcacaaggag
      421 aaactatacc tgagagaatt aaacgtcatc acggaaacac agtgcacact gggtttaaca
      481 gcattgcgca gtgatgaagt gattgactta atgataaaag aatatccagc taaacacgct
      541 gaatattcgg ttatcctaca agaaaaggaa cgtcagagaa ttacagatca ttataaagag
      601 tattctcaaa tgcaacaaca gagtactcag aaagtcgaag ccagcaaagt acctgagtac
      661 attaagaaag cagccaagaa ggcagctgag ttcaacagca acttaaaccg ggagcgcatg
      721 gaagaaagaa gagcctattt tgacttacag acacatgtta tccaagtgcc tcaaggaaag
      781 tacaaagtgt tgccgacaga ccgaacgaag gtcagttcct acccagtggc tctcatcccg
      841 ggacagttcc aggagtatta taagaggtac tcaccagatg agcttcggta cttgccatta
      901 aacacagccc tgtatgagcc gcccctggac ccagagctcc cggcactaga tagtgatgga
      961 gactcagatg atggcgaaga tggcggaggg gatgagaagc ggaagaataa aggcacttcg
     1021 gacagctcct caggcaatgt gtctgaagga gacagccccc ctgacagcca ggaggacacc
     1081 ttccacggaa gacagaaatc aaaagacaaa atggccactc caagaaaaga cggctccaaa
     1141 cgttctgtac tgtccaaatc agctcctggg tacaagccaa aggtcattcc aaatgctcta
     1201 tgtggaattt gtctgaaggg taaggagtcc aacaagaaag gaaaggctga atcacttata
     1261 cactgctccc agtgtgataa cagtggccac ccttcttgct tggatatgac catggagctt
     1321 gtttctatga ttaagaccta cccatggcag tgtatggaat gtaagacatg cattatatgt
     1381 ggacagcccc accatgaaga agaaatgatg ttctgtgatg tgtgtgacag aggttatcat
     1441 actttttgtg tgggccttgg tgctattcct tcaggtcgct ggatttgtga ctgttgtcag
     1501 cgagctcccc caacacccag gaaagtgggc agaaggggga aaaacagcaa agaggggtaa
     1561 aataggcttt gaccctcatg tttgggatat ttggtgccaa tttatttaca acactttcat
     1621 ttttatgcca ataaaaactt ttttgaaatt aacgatgacc ttaaa
//
