LOCUS       NM_030101                955 bp    mRNA    linear   ROD 06-OCT-2024
DEFINITION  Mus musculus pyroglutamyl-peptidase I-like (Pgpep1l), mRNA.
ACCESSION   NM_030101 XM_133560 XM_978288
VERSION     NM_030101.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Ikegami,K., Saigoh,K., Fujioka,A., Nagano,M., Kitajima,K., Sato,C.,
            Masubuchi,S., Kusunoki,S. and Shigeyoshi,Y.
  TITLE     Effect of expression alteration in flanking genes on phenotypes of
            St8sia2-deficient mice
  JOURNAL   Sci Rep 9 (1), 13634 (2019)
   PUBMED   31541165
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK021221.1, BY728828.1 and AC101879.8.
            
            On or before Nov 20, 2009 this sequence version replaced
            XM_978288.1, XM_133560.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK021221.1, BY728828.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               AK021221.1         2-108
            108-146             BY728828.1         106-144
            147-475             AK021221.1         148-476
            476-496             BY728828.1         475-495
            497-953             AK021221.1         498-954
            954-955             AC101879.8         27402-27403
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 37.47 cM"
     gene            1..955
                     /gene="Pgpep1l"
                     /gene_synonym="C330024D12Rik"
                     /note="pyroglutamyl-peptidase I-like"
                     /db_xref="GeneID:78444"
                     /db_xref="MGI:MGI:1925694"
     exon            1..90
                     /gene="Pgpep1l"
                     /gene_synonym="C330024D12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            91..213
                     /gene="Pgpep1l"
                     /gene_synonym="C330024D12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            214..440
                     /gene="Pgpep1l"
                     /gene_synonym="C330024D12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             232..624
                     /gene="Pgpep1l"
                     /gene_synonym="C330024D12Rik"
                     /EC_number="3.4.19.-"
                     /codon_start=1
                     /product="pyroglutamyl-peptidase 1-like protein"
                     /protein_id="NP_084377.1"
                     /db_xref="CCDS:CCDS52271.1"
                     /db_xref="GeneID:78444"
                     /db_xref="MGI:MGI:1925694"
                     /translation="MDSSAKAIFLEQCGKNRGYRDSDVRGFQPEDGVCLPGGPEVRLS
                     VVNMKEVCRRVAVENVEVAFSRDAGRYICDYTYYLSLHLGTGHAALIHVPPLSHWLSA
                     SLLGKALRVIIQEMLEEIGKVQTQSTAA"
     exon            441..955
                     /gene="Pgpep1l"
                     /gene_synonym="C330024D12Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      903..908
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pgpep1l"
                     /gene_synonym="C330024D12Rik"
                     /note="hexamer: AATGAA"
     polyA_site      940
                     /gene="Pgpep1l"
                     /gene_synonym="C330024D12Rik"
                     /note="major polyA site"
ORIGIN      
        1 acgtggtctt ttccatcctg gatctcggct ggaccagcct agcgcagccg ggtctcatgg
       61 attcgcagtc ccgctgcgtg gtggtgaccg gaactttcta agctgggctt aggggtggac
      121 actgacatag aacttcgaac tctgcagctg cctgtggatt acagggaggt aaaacggagg
      181 cttaccacaa tctgggaaga ttttcaacca caacttgttg tgcatgtggg catggactct
      241 tctgccaagg ccatctttct ggaacagtgt ggtaagaacc gaggctatcg ggattcagat
      301 gtaagaggct tccagccgga ggatggagtg tgcctccccg gtggccccga agtgaggctg
      361 tctgttgtca acatgaagga ggtctgccgg cgtgtggctg ttgagaatgt cgaagtggcc
      421 ttttcccgag atgcgggcag gtacatctgc gattacacct actacctgtc tctgcacctt
      481 gggactgggc atgcggctct catccatgtc cctcctctgt cgcactggct ctcggccagc
      541 cttctgggca aagccttgcg agtcatcatc caagaaatgc tggaagaaat cgggaaagtc
      601 cagactcaaa gtacagcagc ttaagggaag cagcaggggg atgccttcct tagatgaaat
      661 ggagtgtttc aggcttggac ggagaagcca gctgtgctat gagaggctct aaaaaaggga
      721 aacagttaca aggctggggg tgggggtggg ggtgggggtg tggactcaca gaatcacaat
      781 cttactttag tgtctaaagc aagaagaaaa tccccaaagg cggatgcttc ataaaggatt
      841 aactagggga agttatgacc tttgtaactc caaagagcca ccaaaaccta gtgtcaagac
      901 caaatgaact gaataactct caagtgttct ttgaaaaaga ttttatttat ttgtt
//
