LOCUS       NM_027629               8641 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus phosphoglucomutase 2-like 1 (Pgm2l1), mRNA.
ACCESSION   NM_027629
VERSION     NM_027629.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 8641)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8641)
  AUTHORS   Rutledge,E.A., Benazet,J.D. and McMahon,A.P.
  TITLE     Cellular heterogeneity in the ureteric progenitor niche and
            distinct profiles of branching morphogenesis in organ development
  JOURNAL   Development 144 (17), 3177-3188 (2017)
   PUBMED   28705898
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC121815.4, BB633030.1, CF531609.1, AK016437.1, AC122269.4 and
            CK379061.1.
            
            On Oct 5, 2007 this sequence version replaced NM_027629.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK039189.1, BC020351.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-19                AC121815.4         44890-44908         c
            20-527              BB633030.1         1-508
            528-650             CF531609.1         425-547
            651-687             CF531609.1         549-585
            688-2452            AK016437.1         47-1811
            2453-8334           AC122269.4         51127-57008
            8335-8641           CK379061.1         21-327
FEATURES             Location/Qualifiers
     source          1..8641
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.33 cM"
     gene            1..8641
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /note="phosphoglucomutase 2-like 1"
                     /db_xref="GeneID:70974"
                     /db_xref="MGI:MGI:1918224"
     exon            1..428
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     CDS             318..2183
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /EC_number="2.7.1.106"
                     /codon_start=1
                     /product="glucose 1,6-bisphosphate synthase"
                     /protein_id="NP_081905.1"
                     /db_xref="CCDS:CCDS40035.1"
                     /db_xref="GeneID:70974"
                     /db_xref="MGI:MGI:1918224"
                     /translation="MAENADDDLNSNLLHAPYLTGDPQLDTAIGQWLRWDKNPKTKEQ
                     IENLLRNGMNKELRDRLCCRMTFGTAGLRSAMGAGFCYINDLTVIQSTQGMYKYLERC
                     FSDFKQRGFVVGYDTRGQVTSSCSSQRLAKLTAAVLLAKDIPVYLFSRYVPTPFVPYA
                     VQELKAVAGVMITASHNRKEDNGYKVYWETGAQITSPHDKEILKCIEECVEPWNDSWN
                     DNLVDTSPLKKDPLQDICKKYMEDLKKICFYRDLNSKTTLKFVHTSFHGVGHDYVQLA
                     FQVFGFKPPIPVPEQKDPDPDFSTVKCPNPEEGESVLELSLRLAEKENARIVLATDPD
                     ADRLAVAELQENGRWKVFTGNELAALFGWWMFDCWKKNKPNADVKNVYMLATTVSSKI
                     LKAIALKEGFHFEETLPGFKWIGSRIKDLLGNGKEVLFAFEESIGFLCGTSVLDKDGV
                     SAAAVVAEMASFLDTRKVTLMEQLTKVYEIYGYHMSKTSYFLCYDPPTIKTIFERIRN
                     FESPKEYPKFCGAFAILHVRDITTGYDSSQPNKKSVLPVSKNSQMITFTFQNGCVATL
                     RTSGTEPKIKYYAEMCASPGQSDTTFLEEELKKLIDALIENFLEPSKNALVWRSV"
     exon            429..596
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            597..703
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            704..788
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            789..872
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            873..1066
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            1067..1256
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            1257..1354
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            1355..1532
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            1533..1626
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            1627..1756
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            1757..1946
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            1947..2080
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     exon            2081..8626
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3202..3207
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /note="hexamer: AATAAA"
     polyA_site      3223
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /note="major polyA site"
     regulatory      4189..4194
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /note="hexamer: TATAAA"
     polyA_site      4210
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /note="major polyA site"
     regulatory      8603..8608
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /note="hexamer: AATAAA"
     polyA_site      8624
                     /gene="Pgm2l1"
                     /gene_synonym="4931406N15Rik; BM32A"
                     /note="major polyA site"
ORIGIN      
        1 gcggggccta aggcggcgcg ggcgaaggcg gcgacccaga catctgggac tgttgttgtt
       61 ctctcgcctc acgcccgcct cagtcagttc gagctgagat ccggagctag tctgctggga
      121 ggcggctgtc ctgtctccgc cctctctccg ggttcgctgg agctgcggca ggagctggcg
      181 cggactgaac agctcgcggt tggtctccga tgcccttcgt caaggagggg gtttctggac
      241 cctggtgagc gcacctagag cccccctgac tcagtgtctt cgcccgcccc tcgggcccgc
      301 aaacccgtgt gtctaccatg gctgagaacg cagatgatga cctgaactct aacctgctcc
      361 acgcccccta cctcactggg gacccccagc tagacacggc catcgggcag tggctgcgtt
      421 gggacaagaa tcccaaaaca aaagagcaga ttgaaaatct cttgcggaat gggatgaaca
      481 aggaattgcg tgatcgtctt tgttgccgga tgacttttgg gactgcagga cttcgatctg
      541 ccatgggagc agggttttgc tacatcaatg accttacagt aatacagtca acacagggga
      601 tgtacaaata cctggagaga tgtttttcag acttcaagca aagaggcttt gttgtgggct
      661 atgacactcg gggtcaagtg actagcagct gcagcagcca gaggcttgct aaactcacag
      721 ctgcagtgct gcttgctaaa gatattcctg tttacctttt ctcaagatac gttcctacac
      781 ctttcgtacc atatgccgtt caggagctca aagcagttgc aggtgtgatg attactgcat
      841 ctcataaccg caaagaggac aacgggtaca aggtttattg ggaaactggt gctcaaatca
      901 catctccaca tgataaagaa attctgaaat gtatagaaga gtgtgtggaa ccctggaatg
      961 attcttggaa tgataattta gtggacacca gcccactgaa gaaagatcct ctgcaggaca
     1021 tttgcaagaa atacatggaa gatctgaaga agatctgttt ttacagggac ttaaattcaa
     1081 agaccacctt gaaatttgtt catacctcct tccatggagt tggacatgac tacgtgcagt
     1141 tggcttttca agtatttggt tttaagcctc caattccagt cccagaacag aaagatccag
     1201 atccagactt ttctactgtt aaatgtccaa accctgaaga aggagaatct gtgctggaac
     1261 tgtccctgag actggcagag aaagaaaatg cccggatagt gctagccaca gatcctgatg
     1321 ccgaccggct ggctgtggca gaacttcagg agaatggccg ttggaaagtt ttcacaggaa
     1381 atgagctggc agctttgttt gggtggtgga tgtttgattg ctggaagaaa aacaaaccaa
     1441 acgccgatgt gaagaatgtt tacatgctag ccaccactgt ctcttctaaa attttaaagg
     1501 caattgcact taaagaagga tttcattttg aagaaacatt accaggcttt aaatggattg
     1561 gaagtaggat aaaagacctc ctaggaaatg gaaaagaagt cctttttgca tttgaagagt
     1621 ctattggctt tctgtgtgga acctccgtgt tggacaaaga tggagtgagt gcagctgctg
     1681 ttgttgctga gatggcctct ttcctggata ccaggaaggt aacactgatg gagcaactga
     1741 caaaagtgta tgaaatatac ggttaccata tgtccaaaac ttcatatttc ttgtgttatg
     1801 atccacctac catcaaaacc atatttgaaa ggattcgaaa ttttgagtct ccaaaggaat
     1861 atccaaaatt ttgtggggct tttgctattt tgcatgtacg ggacataacc actggatatg
     1921 atagcagcca gccaaataag aaatcagtac tgcctgtgag taaaaacagc caaatgatta
     1981 catttacctt ccaaaacggc tgtgtcgcta ctctccgaac aagtgggaca gaaccgaaga
     2041 taaagtatta tgcagagatg tgtgcatcgc ctggccagag tgacactacc ttcctggaag
     2101 aagaattaaa gaaactcatt gacgcgctga tagagaattt tcttgagccc agtaagaacg
     2161 cactggtctg gcgctctgtg tagggcacat cagtacgtta tgactctgca ctgacatatg
     2221 gaacgaaacc ttcaagaact ccactcagtg aaccttgtgt tagaattctc tcatctgcca
     2281 agttatcttt tcccttttct ttcctgtgtt cagctggcta aatagattat atacatttga
     2341 aatgaaaata tttggatatg agtcaaatat tttcataatc ttaagtgaca gtcattacaa
     2401 tgaaagtgtt ccagtggcac gctgttcttc ctgtatcaca aacagtacaa aagtgagttt
     2461 tcatattgaa ctgtgcttaa gcttagttac gtatcttgta attgtgtata gcatggttta
     2521 aaagaagtca aacattatat aactataggg ttagttaagg aaattacttc ttaaaggtgt
     2581 ttgtgtgttt gtggctggga gtactgttcc tgcctgtttt tcaaattaga aacccagctt
     2641 ggtggcatat tcctgccgtc acagccctta ggaggctgag gcaggaggat cattagtagg
     2701 aggatcatta gttagtttat ggctagcctg ggctgcacag taattctttg tctaggaagg
     2761 gagggaggga gggagggagg gagggaggga gggaggaagg aaggaaggaa ggaaggaagg
     2821 aaggaaggaa ggaaggaagg aaggaaggaa ggaaaaaatg tttataggtt atttaggttt
     2881 tctgatttag gacagatgtt accgtctgtg gtttggcacc agtgtttcgg gtgcccttgg
     2941 tgtggtgtat atttactgta tgtatttaag acggatgttt actgaacata aaacagtagt
     3001 ggcagcactc ctcatggctt tattcttgtc aaattcctca gtgcattctc agggtctagt
     3061 gggaactgaa atgatgttcc tgtgttgaat ataacacagt ccattttcag atagttaagg
     3121 aaaatcttcc aaactatata ggtgcttcct ctataggaaa cagatttgtt cactctaaag
     3181 atggttgtag aaaaaggtct taataaattt tggcttaatg taactgtagc tgagtcttcc
     3241 tgctaggatt cagttatcat aacctataag tgaaaaactc tgtcctatgg catcagcatg
     3301 gcatttattt ggcagtcttt tttaattaca tttttatagc cagatttatt tatctgataa
     3361 ggtaatgcta attttaataa aaaatgaaac atcaagatat aagtattttc tacagccaca
     3421 ctaccttgat tcaataccca atctcattct cattatctca gaagctaaac aaggctaagc
     3481 acggtgcttg aatgggaaat tttaggtatt atgaaacact gaaactgaag ttagaactaa
     3541 ggtcaattta ttttagtatg ctccatcagg ctttggaatt tctgatcata taaatacgtt
     3601 tcatcttttt caatgcgaaa cagttttcag gaaagtcatt tgtggttgac tctgtagcct
     3661 tctgaaaagc ctaatggaaa aatactgtct aagctttcca aattatatat ttccccaaat
     3721 agtttacaga atacacacac tacagttatg ataacagtag caaggccttc aggtataatc
     3781 atttaagaaa agttgcctat aggagacaat actgatgtta gatgattagt ttcctaaaaa
     3841 taaataatat aaagcctata ctgattggaa tattaattaa accatggtgt gttttgttgc
     3901 agcttgagga taattttggt tgagcttata taatccaaag ataggtttta cattatgttg
     3961 ccactactgc tctgtgttcc ttccttactg tcttagaact gggtcctaca ttatatagat
     4021 gatagctagt taatgttcag tgccattttc ctgtatgagt ttattttaga ggctttgtgc
     4081 taaaaaaaaa gtagcatgta gaattttttg ttttattttt aaaacatttt gttggctttt
     4141 aggagtgtaa attgtaattt aggaaataac atgtattcta cgacgtggta taaaaaaaca
     4201 tgcccattca gttttagtgt ctgtgtctca gtggcccaag gacaaaatga aaactaaagc
     4261 aatgtgacag cctgtttata acaagaaagc cacgccatga ttgctattca cttgtgaaga
     4321 gaatatcttt gcttcagtgc taaacataca agaaataagt catcgtcacg tgacgttact
     4381 gacatttgag cccttatctt gaaaggctac atcccagctg tgtataaagg ttcccagagt
     4441 gtgtaagttg aggagaccgt ttgattcttg tctacattct tgagtctgtc tgagcatgtt
     4501 taacatgaac atgacacagt gggtgcacag gtgcctaaca ggctaaattt aataacagct
     4561 caagataggc atgccagcct gtgggtctcg accttggaat gataactgca ttgtttatct
     4621 catccctctt ttcagcaata gcatgggaat atattctctt tgagcaaata aatcaaaata
     4681 agtaatttct ggagttctga ggaaaagaat taggctggaa catagctcag tggtaaagca
     4741 cgtacctagc atgcagatga agcaaagctt acatttgatc cctggcaata caaaaagaga
     4801 gaaagttatt attgatgaag cgaagtcaaa tcataaagtg gtaataacca acaaacaata
     4861 tataaaggcc agtaatgatg gtataaaaat gctggagacg tgcaaacatg caccgtaatg
     4921 gtgggtaaac tgtatgcaag gctgtttact tgtgtttgtt aggatgctca gacagcaagc
     4981 ctgtattgtt ttcctttagt ggtggtcact gaaaagaagc ccacttctag gaggtgaggt
     5041 tcaattgaac tgtgggctca attcctagtg gggtgttgtt tcagaatcac gtgagaatga
     5101 gagaagataa agaacaaaat taaaagaaac aaaaccaaga ttggaaagta taacctctaa
     5161 gaaaaagttc aaggaattag gattgttgga ctctgaaaca aaaagctatt gagttcattt
     5221 actaaaccat aaattactca ttgggatttt tgctaaaggt atcaaagtaa gaagcagtag
     5281 tggcaccctg attatctcta gtgaagacac cacagggaat aaggttgcaa aaaaaaaaaa
     5341 aaaaaaaaaa actaaaaatg gccgattcta aaaacacaaa aagaagacct agaagggaac
     5401 tagttgaaaa gtgagacaaa tgggtaggag agggctaaga gaaggatgat ggggttactg
     5461 tgatcataat acattctata cacatgtgta atggtcagaa atgaatgaat ggacaacatg
     5521 aaatgtttaa gaggttagaa tttcctgggt ggaagtgatc atgaaaccta tttaaaacct
     5581 tatttttgat ggaatgatat ttgaaatatt aagggatata ccaaatggca gtttaaagat
     5641 tccttcaaat acatttttaa gaatcagttt gagacagaat tatgaataga gatctatcag
     5701 taacttttgc atttcacacc atagctagag tttggctcac caataacttg tatatatttt
     5761 gaatgggaaa cacatgggtg cagcagtgag cgttctcttt aattttcaag ctgtatgaga
     5821 cttgaacaca ctggcgttca tctgggagaa tgggcgggca gctttataag atagttaaga
     5881 tttattgcaa atataaagta tcagcatttg gatatagtaa cttaagagag tccaagagat
     5941 tggatacttt gtgatgtctg catgtagtaa atagacccca ccccccattg cttttggaat
     6001 tgatgcaaca gagacgcaag tgggagtctc ctgcggcttc tgctgctgtt ctcagacttc
     6061 ccactgatat ttgtaaactt gaaaaataca aattccactt ggatacattt aatttcccac
     6121 ctttcctgct ctacctccct cctccctgtg catcctctac cttctgtact gtgaaatgct
     6181 actaccctgt tacctcactg atacgagtct taactgttca ttcagatggc tttaaactta
     6241 gtagtgaatt gtttgtttat agactgtcat tttcattgtt gtgagaatat ttgagatgca
     6301 ctatatgaag taacttcagt gtctttcaaa gcccatttct ggttgctgga caccactaga
     6361 tggcgacact gtgggctttt acaatgattt tttttttttt ttcctgaatt tgttctagaa
     6421 actgatgagg aaacagatat accaaccaaa gtaatgagct gaccaaggat tttgttgggg
     6481 gttctctgtg ctctgggaaa taagagtaca aaaatttgag gaaatttttt tttcacactg
     6541 tccctcaaag aattttacca taagctgaaa ggagttgaag agagctggtt gtgataactc
     6601 atatgtataa tctcagccct ggagaggcag gagaattggc tgtgagttaa aggtcagttt
     6661 aggctacatg gagagatcta gaccaataag atagatagat agatagatag atagatagat
     6721 agagcaagca agcttaaaat agaagagaat ggcacattgt ctgcctctca caaagcattt
     6781 gtttagtacc aggtagaaac aaaatcagta ttatttttaa ctattcaaaa aatgagaacc
     6841 tgtacattaa ttaagaggcc aagacaagga caaagtgacc agagtttgct ttctaaattt
     6901 tctatcaaca gaaccctaaa gtagaagaat gtgaacagga tgaggaacgg gccttgagag
     6961 caaaacccaa agaagccgca cagggacatg agagcccatg ggggagcctc taagtcacga
     7021 gtaaattctc agttctctac agtaaactat aaagatgagc ttcagtcatt aggagagacg
     7081 cacggggcgc tggggatgtc gctcagtgga gagtgcttgc ctgacatgcc gaaggttcta
     7141 ggtacaacat ccccagaacc attagaaaat aaaaataaaa ggaaactatc agaaaggaac
     7201 acaagtttac tacgtaattc ctaaattccc agccccaccc ccacccccga cctgcaattg
     7261 ctgctttttc ctggaagaac acataatgat cttataataa atacgcattc taggatattc
     7321 tctgtcttcc taacctatac ttccaaagtg ttaatgccag attaattggc ctgcaatata
     7381 tgttaccctt gagccttata atattgtctg atgtataagg caattgattt tgtttaattc
     7441 actgacactc cttaacccac ctgtcagctg cctgagagca aagatcatgg tttattattt
     7501 ttaatatctt ttgcttattc agtatctcct gttatgcagt atttaactgg tggtaatagt
     7561 aaaggaaaaa gcttaaaaga taataaaaca gtaattttcc aattcaattt taaaaatagc
     7621 attactgaaa tatccagtaa gcagtgttta ctaagcatgc acacccttta aatactcatt
     7681 gtcttaggga ttctattgct gtgatgaaca ccatgaccaa aagcagcttg ggaagaaagg
     7741 ggtttatttc attttagaga ttatactcca tcagtggggg gagtcagggc aggaactcag
     7801 gtcaagaacc gggaggctga aactgaagca gaggccagcc atggaggggt gctacttcat
     7861 ggcttgtctg ctttctgata acacccagga ccacccgccc agggctggca ctacacaata
     7921 aaatgaaccc tcccacatca gtcatcaaga aaatgtccta caagccaatc tgatgggagc
     7981 attttcctga ctgaggtttc cacctctaaa aggactagct tttgtgtcaa gttgatataa
     8041 acctatgcag cacgctgttt ctttgacgag tacaaagcat ctttcaacat gaaaagtgtg
     8101 tatgtatgtg tatatataca cacccacata tgtaattttg ctcacaaaaa ggttttggcc
     8161 aggaaggcta agaatgtatc ttatatgggt ttaatgtcac tggtctagat gccattttga
     8221 acccaatagc tctacctttc aagtgagtca catctgattt aatagtgctt aatgcatttt
     8281 gtcaaatatt aggattcatc atgtgtgtta ttggagacac ttagacacaa aagaggggtg
     8341 agtctgcatc tgtatatggt gagactatat tatagattac tataagctct tggtgtacat
     8401 tattgaatat gacaaaacag aattaagaat gtaatacttt tctaatagta gctcagaatt
     8461 gtgcccttgt tttaacagtt tctgtcaata tctcatcttt ccctgtaaag ataacagggt
     8521 atattgtcag cctgtgagaa tttgcacttt atgtatttat gtgtggattt ctgtggtttt
     8581 aaccaaatga aacgttctca gtaataaaca ggcctcctca taggcaaaaa aaaaaaaaaa
     8641 a
//
