LOCUS       NM_145387               3171 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Mus musculus protein glucosylgalactosylhydroxylysine glucosidase
            (Pgghg), transcript variant 1, mRNA.
ACCESSION   NM_145387
VERSION     NM_145387.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3171)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC162287.4 and BC056953.1.
            
            On Feb 15, 2018 this sequence version replaced NM_145387.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC056953.1, AK077662.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-228               AC162287.4         119716-119943
            229-3167            BC056953.1         1-2939
            3168-3171           AC162287.4         125986-125989
FEATURES             Location/Qualifiers
     source          1..3171
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 86.16 cM"
     gene            1..3171
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /note="protein glucosylgalactosylhydroxylysine
                     glucosidase"
                     /db_xref="GeneID:212974"
                     /db_xref="MGI:MGI:2444047"
     exon            1..253
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            254..534
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            535..745
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            746..1181
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1182..1301
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1302..1433
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1434..1545
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1546..1618
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1619..1755
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1756..1889
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1890..1985
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1986..2083
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            2084..2295
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     exon            2296..3171
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3140..3145
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /note="hexamer: ATTAAA"
     polyA_site      3167
                     /gene="Pgghg"
                     /gene_synonym="5730511L01Rik; Athl1"
                     /note="major polyA site"
ORIGIN      
        1 aaacgtcact gtagagtggt atctcaggtc tgtcccagcc ttgcatacat cttagagcca
       61 aagctcaact aacccctagt cctattgcgt ggtctcttcc ccaaaaccat gacagtttcc
      121 caggtcccgc ctaaactcag acccgcccac ctgccacgcg gcagggccgc ttcttcttcc
      181 taccgccagg ggcagctcgc acccacagag ccttcttaca cccggatccc cgcactgagt
      241 ggagagggca gcggccgtct gggctgaggc agctttccat ggacggctct gaagatgacc
      301 cgaccatatt cagtgcccgt tgtctgccca gtgaccccag gctctgggcc actgtaacga
      361 actcatacct aggtacacgt gtgtatcatg acaccatcca tataaacggt gtgtacaatg
      421 gagctgtcgg ggacactcac cgggccagtc tgcccagccc cctcaatgtc cagctggagg
      481 cccctgcagg gacagaacag ctgacagaga cctttaccct ggacaccaac acaggttcct
      541 tcctccacac cctggaaggc cccagcttcc gggcttccca gcggatctat gctcaccgtg
      601 tgttacccca tgtcctggtc ttcagtgtgt ccattgcacg cttgaccaca gggaacaaac
      661 ccatcacagt gccgttacgg gcagacttct cccccgaaag cccagacctg gacctgcgtg
      721 tggggcctga cttccaggga ctccggtacc tgcatggcca cgtacttaac cctgagcagc
      781 ctggagagcc acagcaggaa gtgcatatgc tatggatgcc tgtcccccca gccttgaccc
      841 ttggggaaga ggagaaggac aggacctggg agtttctgac tgttgtgggt agcagccagg
      901 ctgaagccca ggactgcttt gctgaggccc tacagctgca gaccaggggt gttctgtata
      961 caatccatgc agactcctgg ggccggctct gggcaggctg tggcctggat gtggctgggc
     1021 ccctggccct gcgccaggcc cttcgtggct ctctctacta cctgttcagt gagcttcccc
     1081 agcctggcac tcaaggattc atcagccatg ggcttagccc cggaggactc tccaatggga
     1141 gtaaggagga atgctactgg ggccatatct tctgggatca ggacatctgg atgttcccaa
     1201 atattttgat gttccaccca gaagccgcca gggccatcct agaataccga gtccgtacgc
     1261 tgggaggagc cctgaagaat ggccagaacc tgggctacca gggagccaag tttgcttggg
     1321 agagtgcaag cactggcctg gaggtctgcc ctgaggacat ttatgggacc caggagatcc
     1381 atatcaatgg ggctgtggcc ttggcctttc agctgtatta ctattacact caggactcga
     1441 agctcttcca agaggatggt ggctgggatg tggtcagttc tgtggctgag ttttggtgta
     1501 gccgtgtaga atggagctcc caggacaaga tgtaccacct gaaaggagtc atgccccccg
     1561 atgagtacca ttcaggagtc aacaactctg tctacaccaa tgtcctggtc cagaacagcc
     1621 tgcacttcgc tgctgctttg gccaaggact tgggtttgcc tatccgaaaa cagtggctgg
     1681 aggtggctga taggatcaag ataccatttg actctgagca gaacttccac cctgagtttg
     1741 atggctatga gcgtggagaa gaggtgaagc aggcagatgt tgtgctcctg gggtacccag
     1801 tcccctttcc cctgacacct gacatccgaa ggaaaaactt ggagacttat gaggccgtga
     1861 catcccccca gggccctgct atgacctgga gcatgtttgc tgtgggctgg atggaactga
     1921 gggacccctc aagggctcag gtccacctga gcaggagttt cgccaatgtc actgagccct
     1981 tcaaggtgtg gacggagaat gcagacgggt ctggtgcagt gaacttcttg actggcatgg
     2041 ggggcttcct gcaggcagca ctcttcgggt gcacaggatt caggatcact gaggcaggtg
     2101 tgacctttga ccccctgtgt ccagacctgg tctccagagt atctgtctct ggtatctcct
     2161 acctggggaa caagatcaac ttcgcctttt ccaaggactc ggtgacactt gaggtcacag
     2221 cccgtgcaga gccctgggca cccctactag aagctgagct gtggccatcg ctggctcatc
     2281 ttcccctgac accaggacag aaggtctcct ttccccactc agctggccgg atacaaaggt
     2341 catccccata gctgcccaga aattcttccg tggttcctga taggagtttt ggcattagaa
     2401 gtccctttca gttcctctgg gacactcttt tgccctcaac tgcatcccca acctcacaac
     2461 ctcttagtct ggatccagcc ctgaagcagt aaggttacag ggtgtccctt ctgtcccttc
     2521 tgtcccctcc ctcctttcct caccctcgcc agtcctgggc tctctaggcc tcacagatcc
     2581 tttgtttggg gctgaccgca gcaccctccc ctccttatct ccccaccttc ctgtctctct
     2641 aggccttaac ttcctgttca cacgtctgtt ctctgggaaa ctctggtcag caggctaggt
     2701 gggaagtggc cagtgactcc gctgagaagt gagtcacagt caggggctta gctacaggag
     2761 tttcttgtgg caggcagttg acaccaggta gggctagcca agtgctcaga ggttttgcgg
     2821 ctttgaactt cctagtcttt gattcctttc tgacgtcaga tggtatctag cgtactgggc
     2881 taaggtgaga gctgtcctta accactcagc ccgtgagaag gaaggcagtg ttatcacagg
     2941 acagggtaaa tgaagtcaga ctggcgacca gagggaatgg agtcagatgg acagggttcc
     3001 aggccatggt cctggccatc agtgctgagc agcagcgtgg ccttcacttc cattcttagt
     3061 gtttctccag aacaaggttc atagcgtagg accacgatcc tggtaaaccc tgtgctcctg
     3121 taccaagcca acttggctaa ttaaagtcag tgctggcaaa ggctgaagtc a
//
