LOCUS       NM_001110152             676 bp    mRNA    linear   ROD 13-JAN-2022
DEFINITION  Mus musculus prefoldin 4 (Pfdn4), transcript variant 1, mRNA.
ACCESSION   NM_001110152
VERSION     NM_001110152.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Ewart-Toland A, Briassouli P, de Koning JP, Mao JH, Yuan J, Chan F,
            MacCarthy-Morrogh L, Ponder BA, Nagase H, Burn J, Ball S, Almeida
            M, Linardopoulos S and Balmain A.
  TITLE     Identification of Stk6/STK15 as a candidate low-penetrance
            tumor-susceptibility gene in mouse and human
  JOURNAL   Nat Genet 34 (4), 403-412 (2003)
   PUBMED   12881723
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL954701.10.
            
            On Jan 13, 2022 this sequence version replaced NM_001110152.2.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longest isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU525981.1, CO803951.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-32                AL954701.10        10052-10083
            33-140              AL954701.10        14353-14460
            141-281             AL954701.10        15164-15304
            282-676             AL954701.10        17287-17681
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 91.91 cM"
     gene            1..676
                     /gene="Pfdn4"
                     /gene_synonym="0610025M10Rik; 1810063B06Rik; C-1; C1;
                     Pfd4"
                     /note="prefoldin 4"
                     /db_xref="GeneID:109054"
                     /db_xref="MGI:MGI:1923512"
     exon            1..32
                     /gene="Pfdn4"
                     /gene_synonym="0610025M10Rik; 1810063B06Rik; C-1; C1;
                     Pfd4"
                     /inference="alignment:Splign:2.1.0"
     CDS             9..413
                     /gene="Pfdn4"
                     /gene_synonym="0610025M10Rik; 1810063B06Rik; C-1; C1;
                     Pfd4"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="prefoldin subunit 4 isoform 1"
                     /protein_id="NP_001103622.1"
                     /db_xref="CCDS:CCDS50807.1"
                     /db_xref="GeneID:109054"
                     /db_xref="MGI:MGI:1923512"
                     /translation="MAATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKK
                     KHLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEDAKKTLQEEIDALE
                     SRVASIQRVLADLKVQLYAKFGSNINLEADES"
     exon            33..140
                     /gene="Pfdn4"
                     /gene_synonym="0610025M10Rik; 1810063B06Rik; C-1; C1;
                     Pfd4"
                     /inference="alignment:Splign:2.1.0"
     exon            141..281
                     /gene="Pfdn4"
                     /gene_synonym="0610025M10Rik; 1810063B06Rik; C-1; C1;
                     Pfd4"
                     /inference="alignment:Splign:2.1.0"
     exon            282..676
                     /gene="Pfdn4"
                     /gene_synonym="0610025M10Rik; 1810063B06Rik; C-1; C1;
                     Pfd4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtccaagat ggcggccacc atgaagaagg cggctgcaga agacgtgaat gttactttcg
       61 aagatcagca aaaaataaac aaatttgctc ggaatacgag tcgaatcaca gagctaaagg
      121 aggaaataga agtgaagaag aaacatctcc agaacttaga ggacgcctgt gatgacatca
      181 tgctggcaga tgacgactgc ttaatgattc cctaccagat cggagacgtt ttcatcagcc
      241 actctcaaga agaaacacag gaaatgttag aagatgcaaa gaaaactttg caagaagaga
      301 ttgatgcctt agagtccaga gtggcgtcca tccagcgggt gttagccgac ctgaaggtgc
      361 agctatacgc gaaatttggc agcaacataa acctcgaggc agatgaaagc taaacatttt
      421 ataatacttt ttttttatct tgttttaata aacttgaata ttgtcttaaa tgataatttc
      481 ccttctccaa atgaaacaaa aggaaaactt tcttttttaa gaattttcat ttaattaatg
      541 gaaacgccta ttttcacatg tcttgcttat ttattttata tttttaaaag aagacagtgt
      601 tcatgtatgt attttgcata atgattgtat caattttagg agctttatgt catgttatta
      661 aaatcggtta aacagt
//
