LOCUS       NM_001042407            1647 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus peroxisomal biogenesis factor 10 (Pex10), mRNA.
ACCESSION   NM_001042407 XM_131847 XM_910320
VERSION     NM_001042407.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Hanson,M.G., Fregoso,V.L., Vrana,J.D., Tucker,C.L. and
            Niswander,L.A.
  TITLE     Peripheral nervous system defects in a mouse model for peroxisomal
            biogenesis disorders
  JOURNAL   Dev Biol 395 (1), 84-95 (2014)
   PUBMED   25176044
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ176766.1, CJ064027.1, CB203398.1, BY385428.1, BB265326.2,
            CJ313453.1 and CF537727.1.
            
            On or before Jun 17, 2006 this sequence version replaced
            XM_989035.1, XM_131847.6, XM_910320.2, XM_989919.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC147304.1, SRR9219381.69878.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-429               CJ176766.1         2-430
            430-590             CJ064027.1         404-564
            591-863             CB203398.1         165-437
            864-1098            BY385428.1         224-458
            1099-1422           BB265326.2         353-676
            1423-1591           CJ313453.1         140-308
            1592-1647           CF537727.1         12-67               c
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 86.17 cM"
     gene            1..1647
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /note="peroxisomal biogenesis factor 10"
                     /db_xref="GeneID:668173"
                     /db_xref="MGI:MGI:2684988"
     exon            1..145
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..1014
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /EC_number="2.3.2.27"
                     /note="peroxin-10; peroxisome assembly protein 10"
                     /codon_start=1
                     /product="peroxisome biogenesis factor 10"
                     /protein_id="NP_001035866.1"
                     /db_xref="CCDS:CCDS19021.1"
                     /db_xref="GeneID:668173"
                     /db_xref="MGI:MGI:2684988"
                     /translation="MARAGAPEVIRAAQKDEYYLGGLRSAAGEALHSLAGAKKWLEWR
                     KEIELLSDIAYFGLTTIAGYQTLGEEYVGIIQVDPSQQRVPSRLRRAALVALHAVLPY
                     LLDKALLPLEQELQADGDAPRASQGSLLPGGRSRSGARRWVRHHAATLTEQQRKALQR
                     AVFILRQGFACLHRLHVAWFYIHGTFYHLAKRLAGITYLRTRRLPGEDQKARTSYGLL
                     GLISLLHLVLSMGLRLYSFRQKQRARKEWRLHRNLSHRRSSLEDRAVCRTPLCTLCLE
                     ERRHSTATPCGHLFCWECITEWCNTKTECPLCREKFPPQKLVYLRHYR"
     exon            146..226
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /inference="alignment:Splign:2.1.0"
     exon            227..633
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /inference="alignment:Splign:2.1.0"
     exon            634..809
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /inference="alignment:Splign:2.1.0"
     exon            810..945
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /inference="alignment:Splign:2.1.0"
     exon            946..1647
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1079..1084
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /note="hexamer: TATAAA"
     polyA_site      1098
                     /gene="Pex10"
                     /gene_synonym="Gm142"
                     /note="major polyA site"
ORIGIN      
        1 gaggtgcgca ggcgcggtgc gagctctgcg attcgggcca tggcgcgggc gggtgcccct
       61 gaagtgatcc gggcagcgca gaaggacgag tactacctgg gaggcctgcg gagcgcggcg
      121 ggtgaagcgc tgcacagcct agcgggtgca aagaaatggc tggaatggag gaaagagatc
      181 gagttgctct cggacatagc ctactttggc ctcaccacaa ttgcaggcta ccagaccctt
      241 ggggaggagt acgttgggat catccaagtg gacccatccc agcagcgtgt gccctccagg
      301 ctccgccgtg cagcgctggt tgcactgcat gctgtcttgc cctacctgct agacaaggca
      361 ctgctgcccc tggagcagga gctgcaagcc gatggcgatg ctccccgggc ttcacagggc
      421 agtctgctac ctggaggacg cagccgatca ggggcacggc gctgggtgcg tcaccacgca
      481 gccaccctga ctgaacaaca gaggaaggcc ctccagcggg cagtcttcat cctgagacag
      541 ggcttcgcct gcctccatcg gctccacgtg gcttggtttt atattcatgg taccttctac
      601 cacctggcca agagactagc agggatcacg tatctccgca ctcgtcgcct gcctggagag
      661 gaccagaagg ctcgcactag ctacggactg ctggggctga tctccctctt gcatctggtg
      721 ctgtccatgg ggctgcggtt gtacagcttc aggcagaagc agcgagccag gaaggagtgg
      781 cggctgcacc gcaatctatc ccaccgcagg agttcccttg aagacagagc cgtgtgcaga
      841 accccactct gcaccctatg cttagaggaa cgaagacact ccacggccac accttgtggc
      901 catctcttct gctgggagtg catcaccgag tggtgcaaca ccaagacaga atgtcccctg
      961 tgccgggaga agtttccacc tcagaagctg gtctacctga gacactaccg ctgacagctc
     1021 caagaagtgg atggaactca tggaagagtt tctcctcaga actgtggctg cacagaaata
     1081 taaaacctcc acaccgttct tttgtcacat aagctactac agttacctgg aaaaaagggg
     1141 gggtcaggta caagtgggga aaattcagta tgggggtggg gtgggagagt ctgtcacatg
     1201 taatttacag cttcttcagt ctctggagat agtgggcttc ccctcccttc ccaagccaca
     1261 cagctgagca ctgcttcaga agttcagggt gttttactca ggcctgtaaa gaagaggcca
     1321 ccatcgggct gaggcagggc tcaggatagg ctggaaggga agtataacac tctgggctca
     1381 ccaacaccag taccccccct aaacccatgt tgccaactcc ctaagaaaat gatgcctcag
     1441 aggctaagag cactggatgt tctgcagaag ttctgagttc aattcccagc agccacacgg
     1501 tggctcacaa ccatctatgc tgggatctga tgccctttct ggtgtgcagg cagaacgcta
     1561 taatacataa taaataaatc tttaaaaaaa gaaaaataga aaatgaaggt cttcatcttg
     1621 gcctagcagg tagggagggg gtctccc
//
