LOCUS       XM_017320036            3089 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus period circadian clock 3 (Per3), transcript
            variant X9, mRNA.
ACCESSION   XM_017320036
VERSION     XM_017320036.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017320036.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3089
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..3089
                     /gene="Per3"
                     /gene_synonym="2810049O06Rik; mPer3"
                     /note="period circadian clock 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 140 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     6 samples with support for all annotated introns"
                     /db_xref="GeneID:18628"
                     /db_xref="MGI:MGI:1277134"
     CDS             75..2486
                     /gene="Per3"
                     /gene_synonym="2810049O06Rik; mPer3"
                     /codon_start=1
                     /product="period circadian protein homolog 3 isoform X9"
                     /protein_id="XP_017175525.1"
                     /db_xref="GeneID:18628"
                     /db_xref="MGI:MGI:1277134"
                     /translation="MKVLKYAGHPPFEHSPVRFCTQNGEYVILDSSWSSFVNPWSRKV
                     SFIIGRHKVRTSPLNEDVFATRIKKAASNDKDIAELQEQIHKLLLQPVHASASSGYGS
                     LGSSGSQEQHVSITSSSESSGHCPEEGQHEQMTLQQVYASVNKIKNVGQQLYIESMAR
                     SSVKPVAETCVEPQGGDEQKDFSSSQTLKNKSTTDTGSGGNLQQEQPSSSYQQMNCID
                     SVIRYLTSYSLPALKRKCISCTNTSSSSEEAKPIPEVDSSQRDTEQLLDIRKQETTGP
                     STDIEGGAARTLSTAALSVASGISQCSCSSTSGHAPPLQSAESVAVACKPWALRTKAS
                     HLAAGGFKHVGLTAAVLSAHTQKEEQNYVDRFREKILTSPYGCYLQQESRNRAQYSCV
                     QAGSTAKHSRCAGSERQKHKRKKLPAPVDTSSPGAHLCPHVTGLLPDEQHWGPSASPS
                     PLGAGLAFPSALVVPSQTPYLLPSFPLQDMASQGVGVSAAWGAAAGCPPLSAGPQAVA
                     AFPSAYVDTLMTIFLHNAPLFPLWPPSFSPYPSLGAAGSSELAPLVPAMAPNPEPTTS
                     GHSQRRVEENWEAHSEELPFISSRSSSPLQLNLLQEEMPAPSESADAVRRGAGPDAKH
                     HCVTGPSGSRSRHCTSGELATATAQQESAAASGSSASSIYFSSTDYASEVSENRQRPQ
                     DRQRDEALPGAAEESIWRMIERTPECVLMTYQVPERGREEVLKQDLEKLQSMEQQQPL
                     FSPAQREELAKVRSWIHSHTAPQEGHLQLNLNRTLSQKESKLGCLFGPQLQPPLCLIK
                     PFRCI"
ORIGIN      
        1 agctcctcga atccctgtag ataaaagaat ttttaccaca acacacactc caggatgtgt
       61 gtttcttgaa gtagatgaaa gttttaaagt atgccggcca ccctccgttt gaacactcgc
      121 ccgtcagatt ctgcactcag aacggagagt atgtcattct ggattccagc tggtccagct
      181 ttgtcaaccc ctggagccgg aaggtctcct tcatcattgg tcgacataaa gtccgaacga
      241 gtccattaaa tgaagatgtt tttgccacca gaataaaaaa ggcagccagt aacgacaaag
      301 acatagcaga attacaagaa caaattcaca aacttctctt gcagccggtt catgctagtg
      361 cttccagtgg ctacgggagc ctgggcagca gcggctcaca ggagcagcac gtcagcatca
      421 cctcttcgag tgagtccagc gggcactgtc cggaggaagg ccagcatgag cagatgaccc
      481 tgcagcaggt ctatgccagt gtaaacaaaa ttaagaatgt gggccaacag ctctacatcg
      541 agtccatggc cagatcatca gtgaagccag tggcagagac gtgcgtggaa ccgcagggtg
      601 gtgatgagca gaaggacttt tcttcctctc agacactgaa aaataaaagc accacggata
      661 ctggctccgg tggcaatctg cagcaagagc agcccagctc gtcctatcag cagatgaact
      721 gtatcgacag tgtcatcagg tacctgacaa gctacagcct cccggccttg aaaagaaagt
      781 gcatctcctg cacaaacaca tcttcatcct cagaagaagc caagccaatc ccggaggtgg
      841 acagcagcca gagagacacg gaacagctcc tggacatacg gaaacaggaa acaactggac
      901 catccacaga catcgaagga ggtgctgctc ggaccctgtc caccgccgca ctgagcgtgg
      961 cgtctggcat cagccagtgc agctgcagca gcacctctgg ccacgctccg cccctacagt
     1021 cagcagaaag tgttgccgtg gcgtgtaagc cgtgggccct gagaacgaag gcctctcacc
     1081 tggctgcagg aggatttaag cacgtggggc tcacagcagc tgtcctctct gcacacacac
     1141 agaaggaaga gcagaactac gttgacaggt tccgggaaaa gatcctgacc tcgccctacg
     1201 gttgctatct tcagcaagag agcagaaacc gtgctcagta ctcctgtgtt caagcagggt
     1261 ccactgctaa gcacagcaga tgtgctggaa gcgagaggca gaagcacaaa cgaaagaagt
     1321 tgccagcacc tgtggacacc agcagccccg gtgcccacct ctgtccccat gtcacaggac
     1381 tcctcccgga tgagcagcac tggggcccat ccgctagccc ctcccccctc ggcgcaggct
     1441 tagcattccc ctcggccctg gtagttccca gccagacccc ttatctcctc ccctcttttc
     1501 ccctccaaga tatggcctct cagggagtgg gggtctcggc agcctgggga gctgcagccg
     1561 gatgtccacc tctgtccgcc ggcccccagg ctgttgccgc gttcccctcc gcttacgtgg
     1621 atactttgat gaccatcttc ctgcacaacg cccctctctt ccctctgtgg ccgccctcgt
     1681 tctccccata cccatccctg ggggccgcag ggtcttctga actggcaccc ttagtaccag
     1741 caatggctcc aaacccggaa ccaaccactt caggccacag ccaaaggaga gtggaggaga
     1801 actgggaggc acacagtgaa gagcttccgt tcattagctc acggagcagt tcaccgttac
     1861 agttaaattt actccaggaa gaaatgcctg cgccgtcaga gtccgcagac gcagtgagaa
     1921 gaggcgctgg gccagacgct aagcatcact gtgttacagg tcccagtggc agtaggagcc
     1981 gtcactgcac ctctggtgag ctggccacgg caacagcgca gcaggagtct gctgctgcct
     2041 caggaagcag tgccagcagt atatacttca gtagcactga ctatgcttct gaagtctctg
     2101 aaaacagaca gaggccacag gatagacaga gagacgaagc ccttcccggg gcggctgaag
     2161 agtccatctg gagaatgata gagcggacac cagagtgtgt tctcatgaca taccaggtgc
     2221 ccgagagggg tcgagaggag gtgctgaagc aggacctgga gaagctccag agcatggaac
     2281 agcagcagcc cctgttctct cccgcgcaga gggaggagct ggccaaggtg cgctcctgga
     2341 tccacagcca cacagcccct caggagggac acctccagct gaacctgaat agaacattaa
     2401 gtcaaaagga aagcaaactt ggatgcctct ttggtcccca gcttcagccg ccgctctgct
     2461 taattaagcc ttttcgttgc atatagcaca cgcagaggcg tgctttctaa ctcacaacag
     2521 agtacactac tctctgtcgt tggaaaacac tactcctgta ttcaaccatt tcactccaaa
     2581 acccaaggta atgttttaag tctgtccaat ttttatgaac aaaagtgaca aggaaagttc
     2641 ggaagtacat ttgttacatg aaatacgcac tttgtttaga gaagaccatg cccatcgcta
     2701 aagctaagac ctgcagtaag gatccctcag agcctctttt caaagcatgg ttgctcctac
     2761 agaggaccct tttcagccag cctcctcctc ttcctcctcc tcctcctcct cctgcccctg
     2821 agtggcaccc agaactgaaa aaaaaaaaca aaaaacaaaa agtcacctca cctggaagct
     2881 gaagagtcct ctcaccagtg tccgtgacgg gaagggacag cagtggattc agaagtccta
     2941 tgaagagcag gcagcagaag ggcaccctgt ccatgatgcg gcgagaagtc cgtctgggcg
     3001 tctgctctgg agaacttccg acactcctca ttgagggatt gcccgtttta tctatcatcc
     3061 tgtgacctca tacgtcccct ccaaaaaaa
//
