LOCUS       NM_026441               1551 bp    mRNA    linear   ROD 05-AUG-2024
DEFINITION  Mus musculus penta-EF hand domain containing 1 (Pef1), mRNA.
ACCESSION   NM_026441
VERSION     NM_026441.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Sargeant,J., Seiler,D.K., Costain,T., Madreiter-Sokolowski,C.T.,
            Gordon,D.E., Peden,A.A., Malli,R., Graier,W.F. and Hay,J.C.
  TITLE     ALG-2 and peflin regulate COPII targeting and secretion in response
            to calcium signaling
  JOURNAL   J Biol Chem 297 (6), 101393 (2021)
   PUBMED   34762908
  REMARK    GeneRIF: ALG-2 and peflin regulate COPII targeting and secretion in
            response to calcium signaling.
REFERENCE   3  (bases 1 to 1551)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1551)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. doi:
            10.1038/nature24643. PMID: 29144450]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL606925.16.
            
            On May 1, 2007 this sequence version replaced NM_026441.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK075978.1, AK013238.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-95                AL606925.16        72950-73044
            96-369              AL606925.16        86562-86835
            370-525             AL606925.16        90457-90612
            526-669             AL606925.16        91048-91191
            670-1551            AL606925.16        92647-93528
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 63.43 cM"
     gene            1..1551
                     /gene="Pef1"
                     /gene_synonym="2600002E23Rik; Peflin"
                     /note="penta-EF hand domain containing 1"
                     /db_xref="GeneID:67898"
                     /db_xref="MGI:MGI:1915148"
     exon            1..95
                     /gene="Pef1"
                     /gene_synonym="2600002E23Rik; Peflin"
                     /inference="alignment:Splign:2.1.0"
     exon            96..369
                     /gene="Pef1"
                     /gene_synonym="2600002E23Rik; Peflin"
                     /inference="alignment:Splign:2.1.0"
     exon            370..525
                     /gene="Pef1"
                     /gene_synonym="2600002E23Rik; Peflin"
                     /inference="alignment:Splign:2.1.0"
     exon            526..669
                     /gene="Pef1"
                     /gene_synonym="2600002E23Rik; Peflin"
                     /inference="alignment:Splign:2.1.0"
     exon            670..1551
                     /gene="Pef1"
                     /gene_synonym="2600002E23Rik; Peflin"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaaatccaac caggagcggc attgggagca ggaaactccg cctaccacag ttgtgtgacg
       61 tcataaccgc catggccagc tatccaaacg gacagagttg cccaggagct gcaggacagg
      121 tgcctggagt acccccgggg ggctattatc ctggtcctcc ccatggtggg ggccagtatg
      181 gcagtggact gcccccaggt ggtggctatg gagctcctgc ccctggagga ccctatggat
      241 accccagtgc tggaggagtc ccctcgggaa ctccaagtgg accatatggc ggtatacctc
      301 cagggggtcc ctatggtcag ctacctccag ggggtcccta cggtacccag cctggacatt
      361 atggacaggg tggtgtcccc ccgaatgtgg atcctgaggc ctactcctgg ttccagtcag
      421 tggatgccga tcacagtggc tatatctccc tcaaggagct gaagcaggcc ctagtcaact
      481 ccaactggtc ctcattcaat gacgagacat gcctcatgat gataaacatg tttgacaaga
      541 ccaagtctgg ccgcattgat gtcgccggct tctcagcctt atggaaattc ctccagcagt
      601 ggaggaacct ctttcagcag tatgaccggg accgctcggg ctccattagc tccacagagc
      661 tgcagcaagc gctctcccag atgggctaca acctgagccc tcagttcacg cagctcctgg
      721 tttcccggta ctgcgcacgc tctgctattc ccgccatgca gcttgactgc ttcatcaagg
      781 tgtgtaccca gctgcaggtg ttgactgagg ccttccggga aaaggatacc gctgtacagg
      841 gcaacatccg gctcagcttt gaggactttg tcaccatgac ggcttcaagg atgctatgac
      901 ccagcctccc taaagggagt ggagcacacc aggggatgtg ggcccctcct ttcctcctct
      961 cctagcaaag agtgtttcct agcctgagct aggaagggcg gagcttgact atcctgggct
     1021 gtggagtggt cttgccttgg agtaggggcc ctagagtagc aatggagtta gtgtctggcc
     1081 agctgtcctg gcctctggct ttccccctct actccctgat gccagtgcta agtgctcatt
     1141 ggctgcctac ttgtcatccc tcaccgagac catcgggtca gacgagccca ggttctgcac
     1201 agtggagtca gactgagctg agagagattt gctgggacca gagcctgggg tccctcagct
     1261 cctcagtcct tgtatgttaa cattaatttt cctgaggctt tgcctgcaca agaagcttgg
     1321 acattctgcc atctcggcca tatctgatga ggctcatgac caccaaaact cggacccctc
     1381 actgggctgc cacgttccac ccagcttctc tccccaggaa cattgtcaca tcctactgcc
     1441 aacattgtaa tttgcttgtt tgtttgtttt ttttccccca tttggggcca aaagtccagg
     1501 aaactgtaag tgtcaataaa agaaagactc tgtagtccca tgttttccac c
//
