LOCUS       XM_006512852            4180 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus prenyl (solanesyl) diphosphate synthase,
            subunit 2 (Pdss2), transcript variant X1, mRNA.
ACCESSION   XM_006512852
VERSION     XM_006512852.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006512852.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4180
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..4180
                     /gene="Pdss2"
                     /gene_synonym="5430420P03Rik; Gm60; kd; mDLP1; Plmp"
                     /note="prenyl (solanesyl) diphosphate synthase, subunit 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 mRNAs, 3 ESTs, 115 long SRA reads, 1
                     Protein, and 98% coverage of the annotated genomic feature
                     by RNAseq alignments, including 29 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:71365"
                     /db_xref="MGI:MGI:1918615"
     CDS             2363..3535
                     /gene="Pdss2"
                     /gene_synonym="5430420P03Rik; Gm60; kd; mDLP1; Plmp"
                     /codon_start=1
                     /product="all trans-polyprenyl-diphosphate synthase PDSS2
                     isoform X1"
                     /protein_id="XP_006512915.1"
                     /db_xref="GeneID:71365"
                     /db_xref="MGI:MGI:1918615"
                     /translation="MSLRQLLLRLSGYLGASGPPSRHWWYFRSLDSISSAGSWRGRSS
                     RSPAHWNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQVRKLVGTGHPLLTTARAL
                     VHDSRHNLQLRGLVVLLISKAAGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTAL
                     LVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLSS
                     ALMDLVHGVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAAMELAKHDA
                     AVQDMAFQYGKHMAMSHKINADLQPFIKDKASDSKTFNLNSAPVVLHQEFLGRDLWIK
                     QIGELRETIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIVFAVTRFS"
ORIGIN      
        1 ttaattttcc aaaactgatt accactagat acaatgcaac cttttaactg ttaagtataa
       61 aggaaagtgc tggttattta aagtaaatgg gagcagaagt cccatgaata atcaaaaacg
      121 tggctaacag accaagacca gagaataatg cacttggctt ttgtgaagaa attaaagtac
      181 atactgtgaa ttttcattaa agcaaatgtg tgaaaagtta ctcttaaggt accatgatct
      241 tgaagaagca gcctcagatg ctcgatatat tacactcagt ctctctcttt ctctggattt
      301 ttctgacttc cttctccttg gacaacccag cttaggtctt agaactcttt agaatgataa
      361 aatatttcac cttttacatt tatttttaca tagtagtata cttggatttt attgctagga
      421 atcttacata ggaactccct tatggggaga ctgtttttaa atataattca cctttaatta
      481 atatgctgtt ttatctatgg agccctcact ctggagccct ggctagccta gaactggcta
      541 tgtagaccag gctgctcttg aacctagaga tccttctgcc tctgcctcct gagtgcttgt
      601 aagcaccacc attcctggct caaaaacaga atctttaaat cacaggagac ttggcactca
      661 aagggagttt gccgctaaac cttctgtggc taaaagcatc ttgtgtgaac aatttctctt
      721 tgtttttcta gttcatttac ataatgtgag cttaaaaaat accaactatg aattttgaaa
      781 gctcacatga attttaaaaa ccattcctga gtgtaaaatg taggtaacaa gtcgtttatt
      841 atttttatat tactgatctt aatgttactt ttttcttccc aagggattga atttaaggtt
      901 ttgtaatttt taattttttt atgattaaca aggacttcaa cacttgtttt gtctaattag
      961 aaagggcaag atgctagacg tgcttgaata ggtggcaccc gaagagcaga gtggccctct
     1021 ggccctcgtc tgtaatccca ggacttgaga ggtggatggg gtcaagaagt tacaggtcag
     1081 tttgctacac agtaagaagt ctcaggccac tgtggcctag gggaaaaaaa aaacgttcca
     1141 tccaacactg aaagcgtcgt cacactgaca attttacttt agcaatgaga aagaattttt
     1201 ggtaacatat tacttaatgt tgtggttaag agtatgtatt caaataacca aattgttagg
     1261 tcgggtatgt ggttccgaag tagagcacta gcctagcatt actgcatgag gcctggcctc
     1321 tatccctagt acccaaagga gaggagaaaa aaagatacca gatcctctag gttcacattt
     1381 tgcttaatgt gaccataaca acttacaatt tggctgtgcc tcattccgtt cccccccatc
     1441 ccccctaaaa tccggggaat agtattatct ttaaaactca acaaaagatt aagtgagcta
     1501 atatgtgaaa tgcactcatg ccagtgaatt ttcagtcccg gagcaagcga cgtttcattc
     1561 cattctcaca gcatccttat tttctggatt tttcacagaa atcctggcac ttcggccagg
     1621 aagctgaggg aagcagggct cagcctcacc gatccacttg cgttccagct ctgggggggc
     1681 cgcggaggag acgtcgtcgc ccagctagcg gggccgccct cccgggtccg cggcccccac
     1741 caagggccta aggcgcccag gagcaaaagg cttccggacg agcctgcgcc acgggcctac
     1801 gatctcgccg cggacccacg atacagacat ttatttacat aagcttcact ctgcgttggg
     1861 ccgggagaaa cgctgcagag accccgagag cgcctagatc cagggctagc ggggtgccaa
     1921 agggcggaca ccgacgtcct ggggcacagg ctcccttcca tctctcgcct tccggtcatc
     1981 actgagggtc cgccccttag tggggaggtc ccagctgtgc cgtaaagtaa agagcactct
     2041 ttgccgctca tcagcccgcc cctatcttta cggcaggccg catttcatgc ctccaacatg
     2101 gcgcccccca tgtaggcact ggctgtggtt accagcgcag gtatccagtg cagttctgag
     2161 cagccgctgg ggttacgcca gtctgcgctg cagaagcagc aaacgttatt cctggttacg
     2221 gctccagaaa gccatacttc tctgagggtt tggaatcgcc gtctcctgtt agattctgaa
     2281 agtttctcct cagcccttgt ttgcttcccg tgtcatttct ggccaccttc ctcaggtccc
     2341 cgaccctctc agactcaaaa ctatgagcct ccggcagctg ctgttgcgct tgtccggtta
     2401 cctcggggct tcaggtcccc ccagtcgcca ctggtggtac ttcagatccc tcgacagcat
     2461 ctcctcggcg ggctcctggc gcgggcgctc ctccaggtca ccggcccatt ggaaccaggt
     2521 ggtgtccgag gcggagaaga tcgtgggcta ccccgcatcc ttcatgagcc tgcgctgcct
     2581 gctgagcgac gagctcagca atatcgccat gcaggtgcgg aagctggtgg ggacgggaca
     2641 ccctctgctt accactgcca gggccctcgt gcacgacagc cggcataacc tacaactgcg
     2701 gggcctggtc gtgctcctca tatcaaaggc tgcggggccc agcactcgga acgctgcgtg
     2761 tcagaactac gacatggtca gtggggtata ctcatgtcaa agaagtttgg cagagatcac
     2821 agaacttatc catactgctc tcctggtgca tcgtgggata gtaaacttaa gtgaattaca
     2881 gtcatctgat ggaccactga aagacatgca gtttggaaac aaaatagcta tcctgagtgg
     2941 agacttcctt ctagcaaatg catgcaatgg actagctctt ctacagaaca ccaaggttgt
     3001 ggagctttta tcaagtgctc ttatggactt ggtgcatgga gtataccagg agaactctgc
     3061 ttccaccaag gaaaattcta tcccagatga tattggaatc tcgacctgga aggagcagac
     3121 tttcctgtcc cattgtgcct tgctagcgaa gagctgccag gctgcaatgg agttagcaaa
     3181 gcatgatgct gcggtccaag acatggcatt ccagtatggg aagcacatgg ccatgagtca
     3241 caagatcaat gctgacctcc agccttttat taaagacaag gccagtgact ctaagacttt
     3301 taacctaaac tcagcacctg tagtcttaca tcaggagttt cttggaagag atttgtggat
     3361 taagcagatt ggagagttgc gagaaacaat caaagctggc aaaggtgtga cttcagctat
     3421 tgacctgtgt cgttaccatg gaaacaaggc actagaggcc ctggagagct tccctccctc
     3481 agaggccaga tcggctttag aaaacattgt gtttgctgtg accagatttt cttgacacca
     3541 aattaaaaag acactattgt tccttagctg aaaaacccag agaatgaggc ggacaggaga
     3601 gcttttggtg atgaaataag taacgtgttt aatgacttta gaaatatatg tatttttttt
     3661 ttctgtcctt tatctgactg cttaatgaat ctatcctttg gaaccactac aaacaaaacg
     3721 agaaggaaaa aggtcacgcg gttttcactt gtcacgccag agcacacttg aggcttcagc
     3781 aacagaaata attaatgaga ctcgctcccg tgacctcagc aaatggacag gaaataagtc
     3841 cttattgatt ggaccaagcc cgggatggcg ccagggcggt ggctgtggtt ttccttccac
     3901 agaggacaga gcaagctgga agctgcaggt gtcgagcgaa gcactggatg ccagctctgg
     3961 gggacacatc aacaccaatg accagtctgt cgtagtggag aagacctcaa cgcattaagc
     4021 aaaagtctgt gttgcctgct gtcttgaaat catgtgcata tagtgtgaga ggcttgggca
     4081 tcctagttct tatcagattt gggagaagtg aaggagatgt taagctgcca aatacttgaa
     4141 attgaatatt aaaatgttac caagtgttga ctcaattgta
//
