LOCUS       XM_006498191            2861 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus prenyl (solanesyl) diphosphate synthase,
            subunit 1 (Pdss1), transcript variant X7, mRNA.
ACCESSION   XM_006498191
VERSION     XM_006498191.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006498191.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2861
                     /gene="Pdss1"
                     /gene_synonym="2610203G20Rik; 2700031G06Rik; mDLP1; mSPS1;
                     Tprt; TPT; TPT 1"
                     /note="prenyl (solanesyl) diphosphate synthase, subunit 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 ESTs, 1695 long SRA reads, 1 Protein, and
                     82% coverage of the annotated genomic feature by RNAseq
                     alignments, including 35 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:56075"
                     /db_xref="MGI:MGI:1889278"
     CDS             1787..2563
                     /gene="Pdss1"
                     /gene_synonym="2610203G20Rik; 2700031G06Rik; mDLP1; mSPS1;
                     Tprt; TPT; TPT 1"
                     /codon_start=1
                     /product="all trans-polyprenyl-diphosphate synthase PDSS1
                     isoform X4"
                     /protein_id="XP_006498254.1"
                     /db_xref="GeneID:56075"
                     /db_xref="MGI:MGI:1889278"
                     /translation="MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGE
                     KKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHY
                     LEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSD
                     QMGKPTSADLKLGIATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQ
                     TTYLAQQYCHKAVREIRKLRPSTERDALIQLSESVLTRDK"
ORIGIN      
        1 gaacatgaaa gtatttattg ctacacttat ctaggcaaag cctacctatt tgattatttc
       61 attcactcat tcattaagta atttgtggtg ttgggatgga acccaggatg ttgtgcatgc
      121 taggaaaaca cccaaccact cagtcaaaac cctaaacagc aaacgtttta ttttgacaag
      181 tttcatacat gtataacctc catttttaac atagaaacct aataagaaaa taatgagctc
      241 aactttaggg ttaaccctct ttaagtgtgt tgcaaacaag aaaaaaaatt atgattcaga
      301 aaattacagc tggtttattt cttcctagga gggagactgg gaggagaggg gggtcgagat
      361 gtaaaatgaa ttaatgaatg aatgggaaaa aaaacatcaa catgggaagg cagtaaactt
      421 cttcagtctc cccagcgctt gcctctcatt gcctccacct aagattatgg cgtaagatta
      481 ttacgagcat gtataatcat ttgatgaaag tgttataaaa atgctgtttc aacttcggaa
      541 taaatccgac atgcgacagg caaaatgaac aaatgaaaca acgacaataa aaacattttc
      601 ttgagcatcc tgagctgcac tgtatgcatt agcaaataga gttggaaatg gggacgcagg
      661 tcggtaatct cagcagcaat aggctgaggc aggatggtca atttgaaccc aatctggtct
      721 atacaaagcc aatctggtct acacggcgag ataagataac gaaaaaaaat taattttgcg
      781 tagttcatta catccaaggg ttggtctccc atatccagac atgaacaaaa ccgctaaact
      841 atgcatgtat acatctctaa ggctttcagg atagagtcca aaagctaaga gataaggtca
      901 acttagcttc tgttacacaa taacccacag cgtagactaa ttagaggaag ttggcacgtc
      961 cactcggagc ttggcattgc gaaaacaatg gcctcagggt tagcaggtac cggaaccaga
     1021 tttctgcacg ctttgtcccg cgtaggacaa cagttcggac gcacatttct ggataaaagc
     1081 ggacgcggct cccgactaga gccagtggct ccgaggaggg ttgaagagga caggcgaccg
     1141 ggtggggaac agggtgcggc ttcgcgcttc cggtgcccag cttccggctc cgggtttggg
     1201 cttggggcag aggcggagct acggcccgcc gcgactttca gacttgaacc atggctatgc
     1261 gctggtcgtg ctggcggcgt ggctgctcct ggaggccgac cgcggtcggg agcccgcggc
     1321 gggaacgacc tggctgtgtg gagcctctcg gaacacgtgc cgcctcggac acccgcgcgc
     1381 agatacccta ttttagtctt atgaagattt taatgtctgc ctccccaact atgcatagta
     1441 tatcacagtt tcatcaaagg acaccagcaa tgtgcagttg tcgtcaaact cagagtggtg
     1501 agaaatacag tgatcctttt aaacttggct ggagagactt gaaaggtctg tatgaagaca
     1561 ttagaaagga gctgcacatc tccaccagag aactaaagga catgtccgaa tactacttcg
     1621 atggcaaagg aaaagccttt agaccgatta ttgtggtgct aatggcccga gcgtgtaata
     1681 ttcatcataa taatgcccga ttcgatatcc agttttcaca agatgattgc tgagaaggtt
     1741 ctaggcggcg tctgttaaaa agcattgctt tctgttaatt agagagatgc aagccagcca
     1801 gcgctccata gccttagttg cagaaatgat ccacactgct actctggttc atgatgacgt
     1861 tattgatgat gcaagttctc gaagaggaaa acatacagtt aataaaatct ggggtgagaa
     1921 aaaggctgtt cttgctggag atttaattct ttctgcagcg tctgtagctc tggcacggat
     1981 tggaaacaca gctgttgtat ctatgttagc ccaagttatt gaagatttgg tgcgtggtga
     2041 atttcttcag ctagggtcaa aagaaaatga gaatgaaagg tttgcccact accttgagaa
     2101 gaccttcaag aagacagcca gcctgatagc caacagttgt aaagcagtct ctgtcctggg
     2161 ttgccctgac ccagtggtgc atgagatagc ctatcagtat gggaaaaatg ttggaatagc
     2221 ttttcagctc atagatgatg tattggattt cacctcatgt tctgaccaga tgggcaagcc
     2281 aacatctgca gacctgaagc taggcatagc cactggccct gtcttgtttg cttgccagca
     2341 gttcccagaa atgaatgcta tgataatgag acggttcagt ttgccaggag atgtggacag
     2401 agcacgacag tatgtattac agagtgatgg cgtgcagcaa acaacctacc tcgcccagca
     2461 gtactgccac aaagctgtga gagagatcag gaagcttaga ccatctacag aaagggacgc
     2521 cctcattcag ctttcagaaa gtgtgctcac cagagataaa tgacaattcc tcctcttctt
     2581 tctggcagct attttaccag actgtgccta atgattttgt gaaacactat ttgcttcatg
     2641 tgcagaaaac caaaaatcat tttaagaaat aatttcaacc ttattgatgg gcaattttta
     2701 ttggcaaagt ttttcggaaa actttttaaa tgtaattaaa ccagtgtcat tatagtccta
     2761 taaattctaa tcgaggtatc ctgatggtta tatgtggtat tgtttacact gttaatgccc
     2821 acatgtaaag ccattacaca aataaataat caacgttaaa a
//
