LOCUS       XM_036164692            7362 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus PDS5 cohesin associated factor B (Pds5b),
            transcript variant X4, mRNA.
ACCESSION   XM_036164692
VERSION     XM_036164692.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7362
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..7362
                     /gene="Pds5b"
                     /gene_synonym="Aprin; AS3; mKIAA0979; Tg(Wap-ERBB2)229Wzw;
                     WAP-Her-2"
                     /note="PDS5 cohesin associated factor B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 80 ESTs, 1324 long SRA reads, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 28 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100710"
                     /db_xref="MGI:MGI:2140945"
     CDS             261..4541
                     /gene="Pds5b"
                     /gene_synonym="Aprin; AS3; mKIAA0979; Tg(Wap-ERBB2)229Wzw;
                     WAP-Her-2"
                     /codon_start=1
                     /product="sister chromatid cohesion protein PDS5 homolog B
                     isoform X4"
                     /protein_id="XP_036020585.1"
                     /db_xref="GeneID:100710"
                     /db_xref="MGI:MGI:2140945"
                     /translation="MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMD
                     MDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDK
                     LKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT
                     LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLA
                     KALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQ
                     LEFKLKSNDNEERLQVVKLLAKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECV
                     KFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVSIVTAAKKDILLVNDHLLNF
                     VRERTLDKRWRVRKEAMMGLAQIYKKYSLQSAAGKDAAKQISWVKDKLLHIYYQNSID
                     DRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKD
                     LLDLIKQPKTDASVKAIFSKVMVITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEAL
                     VSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQ
                     VNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDE
                     KVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSK
                     ETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLL
                     MNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTT
                     ILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDE
                     CYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNITVRREY
                     LKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMA
                     KNENNSHAFIRKMVENIKQTKDAQGPDDTKMNEKLYTVCDVAMNIIMSKSTTYSLESP
                     KDPVLPARFFTQPDKPKTANVLGAVNKPLSSAGKQSQTKSSRMETVSNASSSSNPSSP
                     GRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKREDPDLSELEKPRSRKKAPVTDPEE
                     KLGMDDLTKLVQEQKPKGSQRGRKRGRTASDSDEQQWPEEKRHKEELLENEDEQNSPP
                     KKGKRGRPPKPLGGGTSKEEPTMKTSKKGNKKKLVPPVVDDDEEEERQIGNTEHKSKS
                     KQHRTSKRAQQSRAESPETSAVESTQSTPQKGRGRPSKAPSPSQPPKKIRVGRSKQVA
                     TKENDSSEEMDVLQASSPVSDDTTQEGAEEEDISVGNVRRRSSKRERR"
ORIGIN      
        1 cccacgcggc gctctgcctg ccccccaggc gctgtccgcc gcggttcgat tggagcagcc
       61 gcggagctgc tcttggcgcc attttgaagc ggagaggcgg aggaacggcc tggactggct
      121 gcggaagggg agggggggcg ggaggaggcg attggatgcg gcggcggcgg cggcggcggc
      181 gagggcggcg gatccccgag atcggaggag cgcgaggagt gtaggagccg ggcgaccgga
      241 ggggtacaga catttccatc atggctcatt caaagacaag gaccaacgat gggaaaatta
      301 cttaccctcc tggagtcaag gaaatctcag ataaaatctc taaagaggag atggtgaggc
      361 ggttaaagat ggttgtaaaa actttcatgg acatggacca ggactctgaa gaggaaaagg
      421 aactttatct aaacctagct ttacatcttg cttctgactt cttcctcaag catcctgata
      481 aagatgttcg tttactggtg gcttgctgcc ttgctgatat tttcaggatt tatgctcctg
      541 aggctcctta cacgtctccc gataaactaa aggatatatt tatgtttata acaaggcaac
      601 taaagggact agaagataca aagagccctc aatttaatag gtatttttat ttacttgaga
      661 acattgcatg ggttaaatca tataacatat gctttgagtt agaagatagc aatgaaatct
      721 ttactcaact ttacagaaca ttattctcag ttataaacaa tggccacaat cagaaagttc
      781 atatgcacat ggtggacctc atgagctcta tcatttgtga aggtgatacc gtatctcagg
      841 agctcttaga tacagtttta gtaaatctgg tacctgccca taagaactta aacaagcaag
      901 catatgattt ggcaaaggct ttgctgaaga ggactgctca agctattgaa ccatatatta
      961 ccaatttttt taaccaggtt ctgatgcttg ggaaaacatc tatcagtgat ttgtctgagc
     1021 atgtctttga tttgatcttg gaactctaca acattgacag ccatttgctg ctttctgttc
     1081 tgccccagct tgagtttaaa ttaaagagca atgataatga agaacgcctc caggttgtta
     1141 aactactggc gaaaatgttt ggggcaaagg attcagaatt ggcttctcag aacaaacccc
     1201 tctggcagtg ctacctgggc aggtttaatg atatccatgt accaatacgc ctggaatgtg
     1261 tgaaatttgc cagccactgc ctcatgaacc atcctgattt agcaaaggat ttaacagagt
     1321 atcttaaagt gaggtcacat gatcctgagg aagctattag acatgatgtt attgtgtcta
     1381 tagtaacagc tgctaaaaag gatattcttc ttgtcaatga tcacttactc aattttgtga
     1441 gagagcgaac attggacaaa cggtggagag tacgtaaaga agccatgatg ggactggccc
     1501 agatttataa gaaatactct ttacagtcag cagctggcaa agatgctgca aaacagatat
     1561 cctgggtcaa ggacaagctg ctgcatatat actatcagaa cagcatcgac gaccggctac
     1621 ttgttgagcg gatctttgct cagtacatgg tccctcacaa tttggaaacg acggaacgga
     1681 tgaagtgctt gtattacttg tacgctacac tggacttgaa tgctgtgaaa gcattgaatg
     1741 aaatgtggaa atgtcaaaat ctactccgac atcaagtaaa ggatttactt gatttaatta
     1801 aacaaccaaa aacagatgcc agtgtcaagg ccatattttc taaagtgatg gttatcacaa
     1861 gaaatttgcc agatcctggt aaggcccaag acttcatgaa gaagttcaca caagtgttgg
     1921 aagatgatga gaaaatacgg aaacagctgg aagcccttgt tagtcccaca tgttcctgca
     1981 agcaggctga aggctgtgtg cgtgaaataa ctaagaagtt gggcaaccct aagcagccta
     2041 caaacccttt cttggaaatg atcaagtttc tcttggagag gatagctcct gtacacatag
     2101 acactgaatc catcagtgct cttatcaagc aagtgaataa atcaatagat ggaacagcag
     2161 atgatgagga tgagggtgtt ccaactgatc aagctatcag ggcaggcctt gagctgctga
     2221 aggtgctgtc ttttacgcac cctatctcct ttcactctgc tgagacgttt gagtcccttc
     2281 tggcttgtct gaagatggat gatgagaagg tggcagaagc tgcactacaa attttcaaaa
     2341 acacaggaag caaaattgaa gaggatttcc ctcacatcag atcagccttg cttcctgtac
     2401 tacatcacaa atccaaaaaa ggaccacctc ggcaggccaa atacgccatc cattgtattc
     2461 atgccatatt ttctagtaaa gaaacccagt ttgcacagat atttgagcct ctgcataaaa
     2521 gcctagatcc aagcaacctg gagcatctta taacccctct ggtcactatt ggtcatattg
     2581 ctcttctcgc acctgatcag ttcgctgctc ctctgaagtc tttggtggca actttcattg
     2641 tgaaggacct cctcatgaat gaccggcttc caggaaaaaa gacaactaag ctttgggttc
     2701 cagatgagga agtctcacct gagacaatgg tcaaaattca ggctattaaa atgatggttc
     2761 gatggctact tggaatgaag aataatcaca gtaagtcagg aacttccacc ctcagattac
     2821 taacaacgat actgcatagt gatggggatt tgacagaaca agggaaaatt agtaaaccag
     2881 atatgtcacg cctgagactt gctgctggga gtgctattgt gaagctggca caggagccct
     2941 gttaccacga gatcattaca ctggagcagt accagctgtg tgcattagcc atcaatgatg
     3001 agtgttatca agtcaggcag gtgttcgctc agaaacttca caaaggcctt tcccgcttac
     3061 ggcttcccct tgagtacatg gccatctgtg ctctttgtgc caaagaccct gtgaaagaga
     3121 ggcgagccca tgctagacag tgcttggtga agaacatcac tgtgaggagg gagtacctga
     3181 agcagcatgc agctgttagt gaaaaattat tgtctcttct accagagtat gttgttccat
     3241 atacaattca ccttttggca catgacccag attatgtcaa agtacaggat attgaacaac
     3301 ttaaagatgt gaaagaatgc ctttggtttg ttctggagat attgatggct aaaaatgaaa
     3361 acaacagcca tgcatttatc agaaaaatgg tagaaaatat taaacagaca aaagatgctc
     3421 aaggaccaga tgatacaaaa atgaatgaaa aattgtacac cgtgtgtgat gttgccatga
     3481 acatcatcat gtccaagagc accacgtaca gcctggagtc tcctaaggac cccgtgctgc
     3541 cagctcggtt tttcacccag cctgacaagc ctaaaacagc caatgttctc ggagcagtta
     3601 ataagccact ttcatcagca ggcaaacagt ctcagaccaa atcatcaaga atggaaactg
     3661 tgagcaacgc aagcagcagc tccaacccaa gctctcctgg aaggatcaag gggaggcttg
     3721 atagctctga aatggatcac agtgaaaatg aagattatac aatgtcttca cctttgccag
     3781 gaaaaaaaag tgacaagaga gaagaccctg atctttctga gttggagaag cctagaagtc
     3841 ggaaaaaagc acctgtcaca gaccctgaag agaaattagg tatggatgac ctaactaagt
     3901 tggtacagga acagaaacct aaaggcagtc agcgaggccg gaaaagaggc cgtacagctt
     3961 cagactcaga cgagcagcag tggcctgagg agaagaggca caaagaggag ctcctggaaa
     4021 atgaggatga gcagaacagc ccaccaaaaa agggcaaaag aggcaggcca ccaaaacctc
     4081 ttggtggggg gacatcgaag gaagagccca caatgaaaac atccaagaaa ggaaacaaga
     4141 aaaaacttgt acctcctgta gtagacgacg atgaagaaga agaaagacaa attggaaaca
     4201 cagaacataa gtcaaaaagc aaacagcacc gcacatcaaa gagagcacaa cagagcagag
     4261 cagaatctcc tgaaacaagt gcagttgaat ccacacagtc cacaccacag aaaggacgag
     4321 gaagaccatc aaaagcacca tcaccatcac aaccccccaa aaaaatccgt gtaggacgct
     4381 ccaaacaggt agccactaaa gaaaacgatt caagtgaaga aatggatgtg cttcaggcca
     4441 gctctcctgt cagtgacgac actacacagg aaggagcaga agaggaggac atttctgtgg
     4501 gaaatgtacg acggcgaagc tccaaacgag agagacgatg aacacgtcat taacttctat
     4561 tgtgaaagct ttggggggaa aaaacatttt ttgtctaaat atgaggctaa ataaagcctt
     4621 ggatgcacaa accagaactg ccaaagcgtg gacagttgga cttcggatga ccatgggttt
     4681 gtggtcacac gtatcagcca tccacacagt gataacactg actccagagt cttgtgaaag
     4741 tgtcctgtgt gatggctgtg tagacacaaa ctaaagaaga cacatgtaaa taatcccact
     4801 cccccatttc tgacttctaa agtgcttgta tagcttttat ctgcggcttt aaactgacag
     4861 gacccagctg cttaccggat ctgttcattt gaaaagcatt tgctagggtg gatcttaagc
     4921 agtacgtagt ctgtcagtgt ttgtatttga attctctgca attttactgt gaaaatttgt
     4981 tttcaacaat tggtgtcatt ttctcaatgt cactgtttgt tggagttaaa tggtttcttc
     5041 ctgcccctct ttgtagctca tctatgttta ctccagggca ctgttgtctt ctgaggtgct
     5101 aaagcatctg ccagcacact agaacatgcc tctgtctggg gcacgacatg gattgtgaga
     5161 tagtcctgag cttatctgat gacttcacac ctcagtattg gtcccagaat tctctggcct
     5221 ttcatggcaa cgaaaatttt aagaaagaga tttaaaatat tttaatttta aagagtgtgt
     5281 tataaaataa tgtactaaat tctttattcc attctatcat cttttttcag tttatattaa
     5341 tctactgtat caataaaatt ctgtaatttg aatgggcttt taatagtcta gaatgttatt
     5401 gtgtatagat attacttctt gaacattatg ttcagaaatg caaattatta cactataata
     5461 taaaatctga tatatacacg ttaggaaagt tctcattctc cataaccatg taaagttaat
     5521 cagaaacaaa aaattttatt gatgcagtgt atctttataa atctgttctt gaaagccaag
     5581 tgttttgtat tttatagtga gttgcatgtt tatgaaaaat tgctgatcat gagatgtgct
     5641 tttctgtaaa ttcatactta gccatagtat atgatagatg accccctaac atagtttttc
     5701 atcaagagtt tataattgta ctttattttg gagccaaaaa aaaaattgtt tggtgggggt
     5761 ggtggtactg ggtggcagtg atttatctag tttgggctga gactttaggc gtcacactca
     5821 caaacactga gagagtccca ctgcatccag aataggaaag atggaaattt gcctgggttt
     5881 aatttagagg tctgcaaagt ctaaaaatgg attatcaagg cagtgccctt tacatagagt
     5941 atgaaccaaa atgtattggt tgctacctta tgctcacctg aattaacttt agatttacgg
     6001 gtgcagggtt ggttttgcac aattgttaac agtagaaaag aaaatgacat tttgagttac
     6061 caagttacta tatcaagtta acagagcagt ttcatatagt acacctttat gtttccaaaa
     6121 ttggatataa taaattggga tgctataaag aagtgactat tttagaaatg acatcatgct
     6181 attttctagt atgtatcgca aatgatgtga ttatttttct ttttaatatt tcctcatgtt
     6241 tatgaaacac tttatttttt aaaagatgtt tgaattgtgt cttaatcctt cagtgtttaa
     6301 ctttcttcat ttgcaacagt gttggcaccg tggtgatggg aggcctctgc ctgtgaggac
     6361 agctaaggct gggttatgat actttgtatt ttaaatgttt cattaactca gctctccaga
     6421 caatgatgtt tcgatttcaa cagtacagaa gcatgttttt aaacttacag cataagtaat
     6481 aaaggatagc attgtatttt tgtcatcaac taaacttcat tggaaatatt tatggaaata
     6541 tatgtttaaa accattttat aaaacaaaaa aaatattatg gaggattttt atttgcatga
     6601 tcatagttca ccagatttca ttgcacatta atgctgtgca tcagttcatt acagacatgg
     6661 tcactgtaga ttttgtttgt gtccaatgcc aatgagcctg taattttaca acccgcctgt
     6721 tcacttttgg gaggattata atgtaaaatt tccatttttg tgtagagaaa taggtgcaat
     6781 aatgatcaaa gtttttatgt cctgagtctc catcttgggg gcttattatt atgtttaaac
     6841 ttaacacttc ctgtactaac acttggagag ccacatactt taaaataaag ctaagtatgt
     6901 atacgacatt aattgctaca gttgttagca tactgcagtg gtcgtactca ttttgagaac
     6961 gtgtactgtc tgacattaag gacctgtaac aagctcattg taacaagccg actgtggaag
     7021 gaatctggtg actcccaggt gagccttgct tgctgcagta ccccactaag ctctttcagt
     7081 gatctccatt ctatgtgtaa attagaaatg tgctgtaaaa cttgttctag acattaaagt
     7141 ttaaatgact ttctacatct tcttacagct tgcaagtttg acttttaaag gttccttttg
     7201 cctactgaaa gaatattggg gatttaatga tttgtttaac ttaggcataa ccttctacca
     7261 catagtatta tgttatcaat gaacagttgg ttctagatgt ccagttttca gacacagttt
     7321 tggattttct gtgaacttaa ataaatatag atgctcatgt aa
//
