LOCUS       NM_001416137            2345 bp    mRNA    linear   ROD 14-JUN-2024
DEFINITION  Mus musculus PC-esterase domain containing 1B (Pced1b), transcript
            variant 5, mRNA.
ACCESSION   NM_001416137 XM_006520963
VERSION     NM_001416137.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC102914.9 and AC161194.14.
            
            On Jan 18, 2023 this sequence version replaced XM_006520963.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR13422589.31786.1,
                                           SRR7345562.2310326.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849379
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-198               AC102914.9         57074-57271
            199-281             AC102914.9         87441-87523
            282-346             AC102914.9         89958-90022
            347-482             AC102914.9         171307-171442
            483-676             AC102914.9         184063-184256
            677-2345            AC161194.14        32660-34328
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 52.91 cM"
     gene            1..2345
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /note="PC-esterase domain containing 1B"
                     /db_xref="GeneID:239647"
                     /db_xref="MGI:MGI:2446270"
     exon            1..198
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /inference="alignment:Splign:2.1.0"
     exon            199..281
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /inference="alignment:Splign:2.1.0"
     exon            282..346
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /inference="alignment:Splign:2.1.0"
     exon            347..482
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /inference="alignment:Splign:2.1.0"
     exon            483..676
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /inference="alignment:Splign:2.1.0"
     exon            677..2345
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /inference="alignment:Splign:2.1.0"
     CDS             734..2035
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /note="protein FAM113B; family with sequence similarity
                     113, member B"
                     /codon_start=1
                     /product="PC-esterase domain-containing protein 1B"
                     /protein_id="NP_001403066.1"
                     /db_xref="GeneID:239647"
                     /db_xref="MGI:MGI:2446270"
                     /translation="MVRLLASEVQQLLHNKFVVVLGDSVHRAVYKDLVLLLQKDCLLT
                     NKQLRTKGELSFEKDQLKMGGELDTLHNRTDYREVREFCSDHHLVRFYFLTRVYSEYM
                     ESVLEELQSGNHAPDVIIMNSCLWDVSRYGRNSLSSYKQNLENLFGRMDQVLPKSCLL
                     VWNTAMPLGDKIKAAFLPQKCKGQYPRISVATLKRKVTQANLYSHAEATKHYFDVLDL
                     NFHFRQARKHLQGDGVHWNEHAHRKLSYLLLAHMADAWGVELPQRDSWEPDFEAWESS
                     GQVEERQPQDNLGPQVFAPSPHCPFRPPPLLPSPGLPIRPPPLLGCPLPQPQQMPPFP
                     LYPQVSYFSSDPVFQSDEFYIHSDSPPPTHTGYAFEGDFSFYPQPPVPNFRPPCHQRQ
                     APVVHRGFPRHFARGPYSNPWRDRPRRPPKHSPAGLESRPQ"
     regulatory      2313..2318
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /note="hexamer: AATAAA"
     regulatory      2324..2329
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /note="hexamer: AATACA"
     polyA_site      2333
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /note="major polyA site"
     polyA_site      2345
                     /gene="Pced1b"
                     /gene_synonym="Fam113b"
                     /note="major polyA site"
ORIGIN      
        1 actcacagcg ctgggaagcc gcagcggctc ggagaggccg ccgacggcgg tgcgctcgga
       61 aggtccgcgc gtccgcctgc cggtttgcgc cccgcgcgct cgcaccttcc ctccagctcc
      121 cggtgggcgg cagcctctca actttggcga gtttcgaggc agcggcgcgg gctccccggc
      181 tctctcgctc ggctgcaggt aatgagaggc cctcagatcc cagaggacac cctacaagaa
      241 gaagtcagga tcgtgctgaa gacccggtct ccagcaaaca taggaatgaa caggaaggtc
      301 gcctaaagcc tccacccaga gcctcgggtt tgattctcgc tagaagggcc gggatgactc
      361 ggcaatgaga acgaggcaac gtggagatca ccacctttct ctcctctcgc cttccttcct
      421 ctttccttct cggcgcccag cgatggaggg actggacaat aggatcttcc ttgcacagac
      481 ataggccacc ggaaatggca tcacctcccc agacactgcc ttgtgaaagt tgcagcaccc
      541 agcgctgaac ttatttaccc cgaagacaga gcctgggcca ttctgatcta cagccaggaa
      601 aggactctat ctagggaagg atctagaatc aacagagagt cacctttttt aaaaaagtca
      661 ccagtggttt ccataacagt tcccagaccc agcttgtgca aaagagggag ctaagaggca
      721 caccgcaggc accatggtcc gcctgttggc ctccgaagta cagcagctac tccacaacaa
      781 gtttgtggtc gtccttgggg actctgtgca tagggcggtg tacaaggacc tggtgctcct
      841 gctgcagaag gattgcctgc tcactaacaa gcagctcagg accaaggggg agctgagctt
      901 tgagaaggac cagctgaaga tgggaggcga gctggatacc ctgcacaacc gcacggacta
      961 ccgcgaggtg cgcgagttct gctctgacca ccatctggtg cgcttctact tcctcacgcg
     1021 ggtctactct gagtacatgg agagcgtcct agaggagctc caatccggca atcacgcccc
     1081 agatgtgatc attatgaact cttgcctctg ggacgtctcc aggtatgggc ggaattcctt
     1141 gagtagctac aagcagaacc tggaaaactt gtttgggcgc atggaccagg tgctgcccaa
     1201 gtcgtgcctg ctagtgtgga acactgctat gcctttgggt gacaagatca aggcggcctt
     1261 cctcccacag aagtgtaagg gccagtaccc ccggatctcg gtagccaccc tgaaaaggaa
     1321 agtgacccaa gccaatctct atagccatgc ggaagcaaca aagcactatt tcgatgtgct
     1381 ggacttaaat ttccacttcc ggcaagccag aaagcacctg cagggagatg gcgtgcactg
     1441 gaatgagcat gcgcaccgca agctctccta cctgctgctg gcccacatgg ccgatgcatg
     1501 gggtgtggag ttgccccaga gagactcatg ggagcctgat tttgaggcgt gggaaagttc
     1561 aggccaggta gaggaaaggc agccccaaga caacctagga cctcaggtgt ttgccccttc
     1621 tccacattgt ccttttagac cacctcccct tctcccatcc cctggcttgc ccataaggcc
     1681 cccaccccta ctaggatgtc ccctgcccca gccccagcag atgcccccat tcccactcta
     1741 tcctcaagtt tcctattttt cctcagaccc tgttttccag tcagatgaat tctatatcca
     1801 ttccgatagc cccccaccta cccacactgg atatgccttt gagggcgact ttagctttta
     1861 tccccagcca cctgtgccca acttccgccc accctgtcat cagcgtcagg ccccggtagt
     1921 acataggggc ttcccaaggc attttgctcg tggcccctat agtaatcctt ggagagacag
     1981 acccaggcga ccgccaaaac attctccagc cggcctagag tcaaggcccc agtagtgttc
     2041 tgactaagcc ttacctctgg atggggccgt gtgacgtctg tctttttttt tttttttttt
     2101 ttgtctcatt gttggtctaa tacagtgacc ttgctaaccc aaccccagct agtcctgtct
     2161 tggacttctc tttgtttatt gctgttagaa actgaggcag ggaagagcag actggccccc
     2221 ctcctgctgc ctgaggccat ctcttccccc taagtgacca agcaagcatt cttactacct
     2281 cccccttgct attcttgttg cctttttgta aaaataaaat tgaaatacag aaattgtttc
     2341 caaaa
//
