LOCUS       XM_030248394            1876 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X23, mRNA.
ACCESSION   XM_030248394
VERSION     XM_030248394.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..1876
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 23 ESTs, 851 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 54 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
     CDS             166..1434
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X15"
                     /protein_id="XP_030104254.1"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQ
                     SHFPMTHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA
                     NPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQAASVTIPDHLSINLSQPST
                     PSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKG
                     TGASATTTTTSTVPCVTNKLKGEKQRFSPY"
ORIGIN      
        1 ttcccgcccg cccctattgt tccgcccccg gcctcccgcc cttccccttc ccgcccgctc
       61 cccttttccc ctcagtcgac tcgcgcctcc agtttttggc tttcactctt caccagtgac
      121 caaagacttg accactcaaa gtccagctcc ctgtaactgc tagacatgga caccggtgtg
      181 attgaaggtg gattaaatgt cactctcacc atcaggctac ttatgcatgg aaaggaagtt
      241 ggcagtatca tcggaaagaa aggagaatct gttaagaaga tgcgcgagga gagtggtgca
      301 cgtatcaaca tctcagaagg gaattgtcct gagagaatta tcactttggc tggaccgact
      361 aatgccatct tcaaagcctt tgctatgatc attgacaaac tggaagagga cataagcagc
      421 tctatgacca atagtacagc tgccagtaga cccccggtta ccttacggct ggtggttcct
      481 gctagtcagt gtggctctct tattggaaaa ggtggttgca agatcaagga aataagagag
      541 agtacagggg ctcaggtcca ggtggcaggg gatatgctcc ccaactcaac tgagcgggca
      601 atcactattg ctggcattcc gcagtccatc attgagtgtg tcaaacagat ctgcgtggtc
      661 atgttggagt cccccccgaa gggcgtgacc atcccgtacc ggcccaagcc ctccagttct
      721 ccagtcatct ttgcaggtgg tcaggcctat accattcaag gacagtatgc cattccacag
      781 ccagatttga ccaagctgca ccagttggca atgcaacagt ctcattttcc catgacccat
      841 ggcaacaccg gattcagtgg tttggatgca tctgctcaaa ctacttctca tgaactcacc
      901 attccaaatg atttgattgg ctgcataatc gggcgtcaag gcgccaaaat caatgagatc
      961 cgtcagatgt ctggggcgca gatcaaaatt gcaaacccag tggaaggatc tactgatcgg
     1021 caggttacca tcactggatc tgctgccagc attagcctgg ctcagtatct aatcaatgtc
     1081 agtttagaaa acgctaaacc ctcctcccag gcagcctccg tcacgatccc tgatcacctc
     1141 agcatcaacc tctctcaacc ctccacccct tcttcttctt cttcctcttc caccaccacc
     1201 ccctcgctcg ccacagcggg gacttccgac gcaccctcca gcctccccaa ccctcttccg
     1261 accgcccctt gtgtctccag tctgcttggc atgaaaccca tccctctcct ggctctaaat
     1321 gttgtgtctg ctgctaaggg taccggggct tcagctacca ccaccaccac ctctactgtg
     1381 ccatgtgtaa ctaacaaact gaaaggcgag aagcagagat tctctcccta ctgagtgctt
     1441 atcttggcat ttcctcaagt gtttgtttat tttgtttttc tttgttaaca ttggtgagaa
     1501 ccaaactatt gtgagcttgt gatcattttc tttttactac tttgggggat aactgggtgg
     1561 gaatggaaac aggggtaata cttgtttagg gttaggtctt cacagctcag tgcctgttca
     1621 gagtctgact tgttgattga aatctctatc tagagccaca gttcttactc tttaattctg
     1681 ttatactttt ttgtagcttt attctgcctt gcaatataaa aaatgtgtta ggctctgtgt
     1741 tgatgaataa aagcttctcc tttagtcctt tctttttttt ttaactttaa atcatttaat
     1801 ggttaaagct gtcagctgga cttcttggct gaatctgtgt tctagttata ataaagttgc
     1861 cacagtaaga acagta
//
