LOCUS       XM_030248393            1854 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X22, mRNA.
ACCESSION   XM_030248393
VERSION     XM_030248393.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..1854
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 21 ESTs, 819 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 54 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
     CDS             141..1412
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X14"
                     /protein_id="XP_030104253.1"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQ
                     SHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI
                     ANPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQAASVTIPDHLSINLSQPS
                     TPSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAK
                     GTGASATTTTTSTVPCVTNKLKGEKQRFSPY"
ORIGIN      
        1 tcccgcccgc ccctattgtt ccgcccccgg cctcccgccc ttccccttcc cgcccgctcc
       61 ccttttcccc tcagtcgact cgcgcctcca gtgaccaaag acttgaccac tcaaagtcca
      121 gctccctgta actgctagac atggacaccg gtgtgattga aggtggatta aatgtcactc
      181 tcaccatcag gctacttatg catggaaagg aagttggcag tatcatcgga aagaaaggag
      241 aatctgttaa gaagatgcgc gaggagagtg gtgcacgtat caacatctca gaagggaatt
      301 gtcctgagag aattatcact ttggctggac cgactaatgc catcttcaaa gcctttgcta
      361 tgatcattga caaactggaa gaggacataa gcagctctat gaccaatagt acagctgcca
      421 gtagaccccc ggttacctta cggctggtgg ttcctgctag tcagtgtggc tctcttattg
      481 gaaaaggtgg ttgcaagatc aaggaaataa gagagagtac aggggctcag gtccaggtgg
      541 caggggatat gctccccaac tcaactgagc gggcaatcac tattgctggc attccgcagt
      601 ccatcattga gtgtgtcaaa cagatctgcg tggtcatgtt ggagtccccc ccgaagggcg
      661 tgaccatccc gtaccggccc aagccctcca gttctccagt catctttgca ggtggtcagg
      721 cctataccat tcaaggacag tatgccattc cacagccaga tttgaccaag ctgcaccagt
      781 tggcaatgca acagtctcat tttcccatga cccatggcaa caccggattc agtgcaggtt
      841 tggatgcatc tgctcaaact acttctcatg aactcaccat tccaaatgat ttgattggct
      901 gcataatcgg gcgtcaaggc gccaaaatca atgagatccg tcagatgtct ggggcgcaga
      961 tcaaaattgc aaacccagtg gaaggatcta ctgatcggca ggttaccatc actggatctg
     1021 ctgccagcat tagcctggct cagtatctaa tcaatgtcag tttagaaaac gctaaaccct
     1081 cctcccaggc agcctccgtc acgatccctg atcacctcag catcaacctc tctcaaccct
     1141 ccaccccttc ttcttcttct tcctcttcca ccaccacccc ctcgctcgcc acagcgggga
     1201 cttccgacgc accctccagc ctccccaacc ctcttccgac cgccccttgt gtctccagtc
     1261 tgcttggcat gaaacccatc cctctcctgg ctctaaatgt tgtgtctgct gctaagggta
     1321 ccggggcttc agctaccacc accaccacct ctactgtgcc atgtgtaact aacaaactga
     1381 aaggcgagaa gcagagattc tctccctact gagtgcttat cttggcattt cctcaagtgt
     1441 ttgtttattt tgtttttctt tgttaacatt ggtgagaacc aaactattgt gagcttgtga
     1501 tcattttctt tttactactt tgggggataa ctgggtggga atggaaacag gggtaatact
     1561 tgtttagggt taggtcttca cagctcagtg cctgttcaga gtctgacttg ttgattgaaa
     1621 tctctatcta gagccacagt tcttactctt taattctgtt atactttttt gtagctttat
     1681 tctgccttgc aatataaaaa atgtgttagg ctctgtgttg atgaataaaa gcttctcctt
     1741 tagtcctttc tttttttttt aactttaaat catttaatgg ttaaagctgt cagctggact
     1801 tcttggctga atctgtgttc tagttataat aaagttgcca cagtaagaac agta
//
