LOCUS       XM_030248392            1891 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X20, mRNA.
ACCESSION   XM_030248392
VERSION     XM_030248392.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..1891
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 18 ESTs, 718 long SRA reads, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 54 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
     CDS             166..1449
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X13"
                     /protein_id="XP_030104252.1"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL
                     AMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA
                     QIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQAASVTIPDHLSINL
                     SQPSTPSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVV
                     SAAKGTGASATTTTTSTVPCVTNKLKGEKQRFSPY"
ORIGIN      
        1 ttcccgcccg cccctattgt tccgcccccg gcctcccgcc cttccccttc ccgcccgctc
       61 cccttttccc ctcagtcgac tcgcgcctcc agtttttggc tttcactctt caccagtgac
      121 caaagacttg accactcaaa gtccagctcc ctgtaactgc tagacatgga caccggtgtg
      181 attgaaggtg gattaaatgt cactctcacc atcaggctac ttatgcatgg aaaggaagtt
      241 ggcagtatca tcggaaagaa aggagaatct gttaagaaga tgcgcgagga gagtggtgca
      301 cgtatcaaca tctcagaagg gaattgtcct gagagaatta tcactttggc tggaccgact
      361 aatgccatct tcaaagcctt tgctatgatc attgacaaac tggaagagga cataagcagc
      421 tctatgacca atagtacagc tgccagtaga cccccggtta ccttacggct ggtggttcct
      481 gctagtcagt gtggctctct tattggaaaa ggtggttgca agatcaagga aataagagag
      541 agtacagggg ctcaggtcca ggtggcaggg gatatgctcc ccaactcaac tgagcgggca
      601 atcactattg ctggcattcc gcagtccatc attgagtgtg tcaaacagat ctgcgtggtc
      661 atgttggaga ctctctccca gtcccccccg aagggcgtga ccatcccgta ccggcccaag
      721 ccctccagtt ctccagtcat ctttgcaggt ggtcaggcct ataccattca aggacagtat
      781 gccattccac agccagattt gaccaagctg caccagttgg caatgcaaca gtctcatttt
      841 cccatgaccc atggcaacac cggattcagt gcaggtttgg atgcatctgc tcaaactact
      901 tctcatgaac tcaccattcc aaatgatttg attggctgca taatcgggcg tcaaggcgcc
      961 aaaatcaatg agatccgtca gatgtctggg gcgcagatca aaattgcaaa cccagtggaa
     1021 ggatctactg atcggcaggt taccatcact ggatctgctg ccagcattag cctggctcag
     1081 tatctaatca atgtcagttt agaaaacgct aaaccctcct cccaggcagc ctccgtcacg
     1141 atccctgatc acctcagcat caacctctct caaccctcca ccccttcttc ttcttcttcc
     1201 tcttccacca ccaccccctc gctcgccaca gcggggactt ccgacgcacc ctccagcctc
     1261 cccaaccctc ttccgaccgc cccttgtgtc tccagtctgc ttggcatgaa acccatccct
     1321 ctcctggctc taaatgttgt gtctgctgct aagggtaccg gggcttcagc taccaccacc
     1381 accacctcta ctgtgccatg tgtaactaac aaactgaaag gcgagaagca gagattctct
     1441 ccctactgag tgcttatctt ggcatttcct caagtgtttg tttattttgt ttttctttgt
     1501 taacattggt gagaaccaaa ctattgtgag cttgtgatca ttttcttttt actactttgg
     1561 gggataactg ggtgggaatg gaaacagggg taatacttgt ttagggttag gtcttcacag
     1621 ctcagtgcct gttcagagtc tgacttgttg attgaaatct ctatctagag ccacagttct
     1681 tactctttaa ttctgttata cttttttgta gctttattct gccttgcaat ataaaaaatg
     1741 tgttaggctc tgtgttgatg aataaaagct tctcctttag tcctttcttt tttttttaac
     1801 tttaaatcat ttaatggtta aagctgtcag ctggacttct tggctgaatc tgtgttctag
     1861 ttataataaa gttgccacag taagaacagt a
//
