LOCUS       XM_030248389            1969 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X12, mRNA.
ACCESSION   XM_030248389
VERSION     XM_030248389.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..1969
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 33 ESTs, 919 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 54 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
     CDS             166..1527
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X8"
                     /protein_id="XP_030104249.1"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDL
                     EGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGLDASAQTTSHELT
                     IPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI
                     NVSLENAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTSDAPSSLP
                     NPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTTSTVPCVTNKLKGEKQRF
                     SPY"
ORIGIN      
        1 ttcccgcccg cccctattgt tccgcccccg gcctcccgcc cttccccttc ccgcccgctc
       61 cccttttccc ctcagtcgac tcgcgcctcc agtttttggc tttcactctt caccagtgac
      121 caaagacttg accactcaaa gtccagctcc ctgtaactgc tagacatgga caccggtgtg
      181 attgaaggtg gattaaatgt cactctcacc atcaggctac ttatgcatgg aaaggaagtt
      241 ggcagtatca tcggaaagaa aggagaatct gttaagaaga tgcgcgagga gagtggtgca
      301 cgtatcaaca tctcagaagg gaattgtcct gagagaatta tcactttggc tggaccgact
      361 aatgccatct tcaaagcctt tgctatgatc attgacaaac tggaagagga cataagcagc
      421 tctatgacca atagtacagc tgccagtaga cccccggtta ccttacggct ggtggttcct
      481 gctagtcagt gtggctctct tattggaaaa ggtggttgca agatcaagga aataagagag
      541 agtacagggg ctcaggtcca ggtggcaggg gatatgctcc ccaactcaac tgagcgggca
      601 atcactattg ctggcattcc gcagtccatc attgagtgtg tcaaacagat ctgcgtggtc
      661 atgttggagt cccccccgaa gggcgtgacc atcccgtacc ggcccaagcc ctccagttct
      721 ccagtcatct ttgcaggtgg tcaggacagg tacagcacag gcagcgacag tgcgagcttt
      781 ccccacacca ccccgtccat gtgcctcaac cctgacctgg agggaccacc tctagaggcc
      841 tataccattc aaggacagta tgccattcca cagccagatt tgaccaagct gcaccagttg
      901 gcaatgcaac agtctcattt tcccatgacc catggcaaca ccggattcag tggtttggat
      961 gcatctgctc aaactacttc tcatgaactc accattccaa atgatttgat tggctgcata
     1021 atcgggcgtc aaggcgccaa aatcaatgag atccgtcaga tgtctggggc gcagatcaaa
     1081 attgcaaacc cagtggaagg atctactgat cggcaggtta ccatcactgg atctgctgcc
     1141 agcattagcc tggctcagta tctaatcaat gtcagtttag aaaacgctaa accctcctcc
     1201 caggcagcct ccgtcacgat ccctgatcac ctcagcatca acctctctca accctccacc
     1261 ccttcttctt cttcttcctc ttccaccacc accccctcgc tcgccacagc ggggacttcc
     1321 gacgcaccct ccagcctccc caaccctctt ccgaccgccc cttgtgtctc cagtctgctt
     1381 ggcatgaaac ccatccctct cctggctcta aatgttgtgt ctgctgctaa gggtaccggg
     1441 gcttcagcta ccaccaccac cacctctact gtgccatgtg taactaacaa actgaaaggc
     1501 gagaagcaga gattctctcc ctactgagtg cttatcttgg catttcctca agtgtttgtt
     1561 tattttgttt ttctttgtta acattggtga gaaccaaact attgtgagct tgtgatcatt
     1621 ttctttttac tactttgggg gataactggg tgggaatgga aacaggggta atacttgttt
     1681 agggttaggt cttcacagct cagtgcctgt tcagagtctg acttgttgat tgaaatctct
     1741 atctagagcc acagttctta ctctttaatt ctgttatact tttttgtagc tttattctgc
     1801 cttgcaatat aaaaaatgtg ttaggctctg tgttgatgaa taaaagcttc tcctttagtc
     1861 ctttcttttt tttttaactt taaatcattt aatggttaaa gctgtcagct ggacttcttg
     1921 gctgaatctg tgttctagtt ataataaagt tgccacagta agaacagta
//
