LOCUS       XM_011245502            1981 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus poly(rC) binding protein 2 (Pcbp2),
            transcript variant X9, mRNA.
ACCESSION   XM_011245502
VERSION     XM_011245502.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011245502.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..1981
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /note="poly(rC) binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 18 ESTs, 748 long SRA reads, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 54 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
     CDS             166..1539
                     /gene="Pcbp2"
                     /gene_synonym="alphaCP-2; Hnrpx"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2 isoform X6"
                     /protein_id="XP_011243804.1"
                     /db_xref="GeneID:18521"
                     /db_xref="MGI:MGI:108202"
                     /translation="MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESG
                     ARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRL
                     VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK
                     QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCL
                     NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGLDASAQTTS
                     HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLA
                     QYLINVSLENAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTSDAP
                     SSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTTSTVPCVTNKLKGE
                     KQRFSPY"
ORIGIN      
        1 ttcccgcccg cccctattgt tccgcccccg gcctcccgcc cttccccttc ccgcccgctc
       61 cccttttccc ctcagtcgac tcgcgcctcc agtttttggc tttcactctt caccagtgac
      121 caaagacttg accactcaaa gtccagctcc ctgtaactgc tagacatgga caccggtgtg
      181 attgaaggtg gattaaatgt cactctcacc atcaggctac ttatgcatgg aaaggaagtt
      241 ggcagtatca tcggaaagaa aggagaatct gttaagaaga tgcgcgagga gagtggtgca
      301 cgtatcaaca tctcagaagg gaattgtcct gagagaatta tcactttggc tggaccgact
      361 aatgccatct tcaaagcctt tgctatgatc attgacaaac tggaagagga cataagcagc
      421 tctatgacca atagtacagc tgccagtaga cccccggtta ccttacggct ggtggttcct
      481 gctagtcagt gtggctctct tattggaaaa ggtggttgca agatcaagga aataagagag
      541 agtacagggg ctcaggtcca ggtggcaggg gatatgctcc ccaactcaac tgagcgggca
      601 atcactattg ctggcattcc gcagtccatc attgagtgtg tcaaacagat ctgcgtggtc
      661 atgttggaga ctctctccca gtcccccccg aagggcgtga ccatcccgta ccggcccaag
      721 ccctccagtt ctccagtcat ctttgcaggt ggtcaggaca ggtacagcac aggcagcgac
      781 agtgcgagct ttccccacac caccccgtcc atgtgcctca accctgacct ggagggacca
      841 cctctagagg cctataccat tcaaggacag tatgccattc cacagccaga tttgaccaag
      901 ctgcaccagt tggcaatgca acagtctcat tttcccatga cccatggcaa caccggattc
      961 agtggtttgg atgcatctgc tcaaactact tctcatgaac tcaccattcc aaatgatttg
     1021 attggctgca taatcgggcg tcaaggcgcc aaaatcaatg agatccgtca gatgtctggg
     1081 gcgcagatca aaattgcaaa cccagtggaa ggatctactg atcggcaggt taccatcact
     1141 ggatctgctg ccagcattag cctggctcag tatctaatca atgtcagttt agaaaacgct
     1201 aaaccctcct cccaggcagc ctccgtcacg atccctgatc acctcagcat caacctctct
     1261 caaccctcca ccccttcttc ttcttcttcc tcttccacca ccaccccctc gctcgccaca
     1321 gcggggactt ccgacgcacc ctccagcctc cccaaccctc ttccgaccgc cccttgtgtc
     1381 tccagtctgc ttggcatgaa acccatccct ctcctggctc taaatgttgt gtctgctgct
     1441 aagggtaccg gggcttcagc taccaccacc accacctcta ctgtgccatg tgtaactaac
     1501 aaactgaaag gcgagaagca gagattctct ccctactgag tgcttatctt ggcatttcct
     1561 caagtgtttg tttattttgt ttttctttgt taacattggt gagaaccaaa ctattgtgag
     1621 cttgtgatca ttttcttttt actactttgg gggataactg ggtgggaatg gaaacagggg
     1681 taatacttgt ttagggttag gtcttcacag ctcagtgcct gttcagagtc tgacttgttg
     1741 attgaaatct ctatctagag ccacagttct tactctttaa ttctgttata cttttttgta
     1801 gctttattct gccttgcaat ataaaaaatg tgttaggctc tgtgttgatg aataaaagct
     1861 tctcctttag tcctttcttt tttttttaac tttaaatcat ttaatggtta aagctgtcag
     1921 ctggacttct tggctgaatc tgtgttctag ttataataaa gttgccacag taagaacagt
     1981 a
//
